RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 MAFGO15525 162 aa20.24■□□□□ 0.83
ITGB1-215ENST00000488494 ARP10275 920 aa20.24■□□□□ 0.83
ITGB1-215ENST00000488494 RASGRP4Q8TDF6 673 aa20.24■□□□□ 0.83
ITGB1-215ENST00000488494 SEPT1Q8WYJ6 367 aa20.24■□□□□ 0.83
ITGB1-215ENST00000488494 ZNF274Q96GC6 653 aaPredicted RBP20.24■□□□□ 0.83
ITGB1-215ENST00000488494 CDX2Q99626 313 aaPredicted RBP20.24■□□□□ 0.83
ITGB1-215ENST00000488494 SDF4Q9BRK5 362 aa20.24■□□□□ 0.83
ITGB1-215ENST00000488494 AGO4Q9HCK5 861 aaKnown RBP20.24■□□□□ 0.83
ITGB1-215ENST00000488494 CHD7Q9P2D1 2997 aa20.24■□□□□ 0.83
ITGB1-215ENST00000488494 GSTTP1A0A1W2PQM5 241 aa20.23■□□□□ 0.83
ITGB1-215ENST00000488494 RBAK-RBAKDNI3L0D1 243 aa20.23■□□□□ 0.83
ITGB1-215ENST00000488494 TREHO43280 583 aa20.23■□□□□ 0.83
ITGB1-215ENST00000488494 NBNO60934 754 aa20.23■□□□□ 0.83
ITGB1-215ENST00000488494 ATP2A2P16615 1042 aaKnown RBP20.23■□□□□ 0.83
ITGB1-215ENST00000488494 MARK3P27448 753 aa20.23■□□□□ 0.83
ITGB1-215ENST00000488494 GNA11P29992 359 aa20.23■□□□□ 0.83
ITGB1-215ENST00000488494 ZNF76P36508 570 aa20.23■□□□□ 0.83
ITGB1-215ENST00000488494 THPOP40225 353 aa20.23■□□□□ 0.83
ITGB1-215ENST00000488494 ITGB3BPQ13352 177 aaPredicted RBP20.23■□□□□ 0.83
ITGB1-215ENST00000488494 GPNMBQ14956 572 aa20.23■□□□□ 0.83
ITGB1-215ENST00000488494 RAB30Q15771 203 aa20.23■□□□□ 0.83
ITGB1-215ENST00000488494 ZNF618Q5T7W0 954 aa20.23■□□□□ 0.83
ITGB1-215ENST00000488494 TRAF7Q6Q0C0 670 aa20.23■□□□□ 0.83
ITGB1-215ENST00000488494 LMBR1Q8WVP7 490 aa20.23■□□□□ 0.83
ITGB1-215ENST00000488494 RNPEPQ9H4A4 650 aa20.23■□□□□ 0.83
ITGB1-215ENST00000488494 SETD4Q9NVD3 440 aa20.23■□□□□ 0.83
ITGB1-215ENST00000488494 SLC9A2Q9UBY0 812 aa20.23■□□□□ 0.83
ITGB1-215ENST00000488494 EMSYQ7Z589 1322 aa20.23■□□□□ 0.83
ITGB1-215ENST00000488494 FAM86B1E9PN63 330 aa20.22■□□□□ 0.83
ITGB1-215ENST00000488494 MEIS1O00470 390 aa20.22■□□□□ 0.83
ITGB1-215ENST00000488494 FAM86B2P0C5J1 330 aa20.22■□□□□ 0.83
ITGB1-215ENST00000488494 RABGGTBP53611 331 aa20.22■□□□□ 0.83
ITGB1-215ENST00000488494 ANAPC15P60006 121 aa20.22■□□□□ 0.83
ITGB1-215ENST00000488494 SSRP1Q08945 709 aaKnown RBP20.22■□□□□ 0.83
ITGB1-215ENST00000488494 MCTP2Q6DN12 878 aa20.22■□□□□ 0.83
ITGB1-215ENST00000488494 NIPA1Q7RTP0 329 aa20.22■□□□□ 0.83
ITGB1-215ENST00000488494 BICD2Q8TD16 824 aa20.22■□□□□ 0.83
ITGB1-215ENST00000488494 CRYGNQ8WXF5 182 aa20.22■□□□□ 0.83
ITGB1-215ENST00000488494 MYLIPQ8WY64 445 aa20.22■□□□□ 0.83
ITGB1-215ENST00000488494 GLG1Q92896 1179 aa20.22■□□□□ 0.83
ITGB1-215ENST00000488494 ZNF576Q9H609 170 aa20.22■□□□□ 0.83
ITGB1-215ENST00000488494 ERAP1Q9NZ08 941 aa20.22■□□□□ 0.83
ITGB1-215ENST00000488494 MSRAQ9UJ68 235 aa20.22■□□□□ 0.83
ITGB1-215ENST00000488494 YBX2Q9Y2T7 364 aaKnown RBP20.22■□□□□ 0.83
ITGB1-215ENST00000488494 TRIP12Q14669 1992 aaPredicted RBP20.22■□□□□ 0.83
ITGB1-215ENST00000488494 NFASCO94856 1347 aa20.22■□□□□ 0.83
ITGB1-215ENST00000488494 BAIAP3O94812 1187 aa20.21■□□□□ 0.83
ITGB1-215ENST00000488494 PARNO95453 639 aaKnown RBP20.21■□□□□ 0.83
ITGB1-215ENST00000488494 GNAT1P11488 350 aa20.21■□□□□ 0.83
ITGB1-215ENST00000488494 ACTR2P61160 394 aa20.21■□□□□ 0.83
ITGB1-215ENST00000488494 MBTPS1Q14703 1052 aa20.21■□□□□ 0.83
ITGB1-215ENST00000488494 NKX2-4Q9H2Z4 354 aa20.21■□□□□ 0.83
ITGB1-215ENST00000488494 IGLV3-22A0A075B6J6 115 aa20.2■□□□□ 0.82
ITGB1-215ENST00000488494 DDX39AO00148 427 aaKnown RBP20.2■□□□□ 0.82
ITGB1-215ENST00000488494 DEXIO95424 95 aa20.2■□□□□ 0.82
ITGB1-215ENST00000488494 CXCL10P02778 98 aa20.2■□□□□ 0.82
ITGB1-215ENST00000488494 CYP3A4P08684 503 aa20.2■□□□□ 0.82
ITGB1-215ENST00000488494 CTSHP09668 335 aa20.2■□□□□ 0.82
ITGB1-215ENST00000488494 PPFIA1Q13136 1202 aa20.2■□□□□ 0.82
ITGB1-215ENST00000488494 GRIN2CQ14957 1233 aa20.2■□□□□ 0.82
ITGB1-215ENST00000488494 CPLX2Q6PUV4 134 aaKnown RBP20.2■□□□□ 0.82
ITGB1-215ENST00000488494 PLA2G4DQ86XP0 818 aa20.2■□□□□ 0.82
ITGB1-215ENST00000488494 SLC9A7Q96T83 725 aa20.2■□□□□ 0.82
ITGB1-215ENST00000488494 SMARCAD1Q9H4L7 1026 aa20.2■□□□□ 0.82
ITGB1-215ENST00000488494 SH3GLB2Q9NR46 395 aa20.2■□□□□ 0.82
ITGB1-215ENST00000488494 TPCN1Q9ULQ1 816 aa20.2■□□□□ 0.82
ITGB1-215ENST00000488494 NRCAMQ92823 1304 aa20.2■□□□□ 0.82
ITGB1-215ENST00000488494 TET1Q8NFU7 2136 aa20.2■□□□□ 0.82
ITGB1-215ENST00000488494 LGR5O75473 907 aa20.19■□□□□ 0.82
ITGB1-215ENST00000488494 MYOGP15173 224 aa20.19■□□□□ 0.82
ITGB1-215ENST00000488494 FOSL2P15408 326 aa20.19■□□□□ 0.82
ITGB1-215ENST00000488494 NLRP5P59047 1200 aa20.19■□□□□ 0.82
ITGB1-215ENST00000488494 ADAM17P78536 824 aa20.19■□□□□ 0.82
ITGB1-215ENST00000488494 SETQ01105 290 aaPredicted RBP20.19■□□□□ 0.82
ITGB1-215ENST00000488494 SCRN1Q12765 414 aa20.19■□□□□ 0.82
ITGB1-215ENST00000488494 TCTN1Q2MV58 587 aa20.19■□□□□ 0.82
ITGB1-215ENST00000488494 CNKSR3Q6P9H4 555 aa20.19■□□□□ 0.82
ITGB1-215ENST00000488494 UIMC1Q96RL1 719 aa20.19■□□□□ 0.82
ITGB1-215ENST00000488494 PCYT2Q99447 389 aa20.19■□□□□ 0.82
ITGB1-215ENST00000488494 AZI2Q9H6S1 392 aa20.19■□□□□ 0.82
ITGB1-215ENST00000488494 PCDHA11Q9Y5I1 949 aa20.19■□□□□ 0.82
ITGB1-215ENST00000488494 RSPH10B2B2RC85 870 aa20.18■□□□□ 0.82
ITGB1-215ENST00000488494 CCNE2O96020 404 aa20.18■□□□□ 0.82
ITGB1-215ENST00000488494 RSPH10BP0C881 870 aa20.18■□□□□ 0.82
ITGB1-215ENST00000488494 KCNJ6P48051 423 aa20.18■□□□□ 0.82
ITGB1-215ENST00000488494 AK2P54819 239 aa20.18■□□□□ 0.82
ITGB1-215ENST00000488494 WDR5P61964 334 aaKnown RBP20.18■□□□□ 0.82
ITGB1-215ENST00000488494 GRIK4Q16099 956 aa20.18■□□□□ 0.82
ITGB1-215ENST00000488494 RUFY4Q6ZNE9 571 aa20.18■□□□□ 0.82
ITGB1-215ENST00000488494 AIFM3Q96NN9 605 aa20.18■□□□□ 0.82
ITGB1-215ENST00000488494 SLKQ9H2G2 1235 aaPredicted RBP20.18■□□□□ 0.82
ITGB1-215ENST00000488494 IPO5O00410 1097 aaKnown RBP20.17■□□□□ 0.82
ITGB1-215ENST00000488494 EIF5BO60841 1220 aaKnown RBP20.17■□□□□ 0.82
ITGB1-215ENST00000488494 CAND2O75155 1236 aa20.17■□□□□ 0.82
ITGB1-215ENST00000488494 CDKL5O76039 1030 aa20.17■□□□□ 0.82
ITGB1-215ENST00000488494 PRR16Q569H4 304 aa20.17■□□□□ 0.82
ITGB1-215ENST00000488494 PPP2R2DQ66LE6 453 aa20.17■□□□□ 0.82
ITGB1-215ENST00000488494 HERC6Q8IVU3 1022 aa20.17■□□□□ 0.82
ITGB1-215ENST00000488494 IL17RAQ96F46 866 aa20.17■□□□□ 0.82
ITGB1-215ENST00000488494 ZNF577Q9BSK1 485 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms