RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 TUSC3Q13454 348 aa6.25□□□□□ -1.41
ITGB1-214ENST00000488427 AHI1Q8N157 1196 aa6.25□□□□□ -1.41
ITGB1-214ENST00000488427 TRIM39Q9HCM9 518 aa6.25□□□□□ -1.41
ITGB1-214ENST00000488427 SRPK3Q9UPE1 567 aa6.25□□□□□ -1.41
ITGB1-214ENST00000488427 RASGRP1O95267 797 aa6.24□□□□□ -1.41
ITGB1-214ENST00000488427 PYGMP11217 842 aa6.24□□□□□ -1.41
ITGB1-214ENST00000488427 PDE6AP16499 860 aa6.24□□□□□ -1.41
ITGB1-214ENST00000488427 HSD3B2P26439 372 aa6.24□□□□□ -1.41
ITGB1-214ENST00000488427 LIMS1P48059 325 aa6.24□□□□□ -1.41
ITGB1-214ENST00000488427 LACTBP83111 547 aaPredicted RBP6.24□□□□□ -1.41
ITGB1-214ENST00000488427 VASNQ6EMK4 673 aa6.24□□□□□ -1.41
ITGB1-214ENST00000488427 CYB5RLQ6IPT4 315 aa6.24□□□□□ -1.41
ITGB1-214ENST00000488427 JAZF1Q86VZ6 243 aa6.24□□□□□ -1.41
ITGB1-214ENST00000488427 SP8Q8IXZ3 490 aa6.24□□□□□ -1.41
ITGB1-214ENST00000488427 C2orf69Q8N8R5 385 aa6.24□□□□□ -1.41
ITGB1-214ENST00000488427 KYQ8NBH2 561 aa6.24□□□□□ -1.41
ITGB1-214ENST00000488427 NINJ1Q92982 152 aa6.24□□□□□ -1.41
ITGB1-214ENST00000488427 NTMQ9P121 344 aa6.24□□□□□ -1.41
ITGB1-214ENST00000488427 TBX22Q9Y458 520 aa6.24□□□□□ -1.41
ITGB1-214ENST00000488427 SCRIBQ14160 1630 aa6.24□□□□□ -1.41
ITGB1-214ENST00000488427 SLC12A8A0AV02 714 aa6.23□□□□□ -1.41
ITGB1-214ENST00000488427 ATF2P15336 505 aa6.23□□□□□ -1.41
ITGB1-214ENST00000488427 FAHP16930 419 aa6.23□□□□□ -1.41
ITGB1-214ENST00000488427 KRT15P19012 456 aa6.23□□□□□ -1.41
ITGB1-214ENST00000488427 SSPNQ14714 243 aa6.23□□□□□ -1.41
ITGB1-214ENST00000488427 PAN2Q504Q3 1202 aaKnown RBP6.23□□□□□ -1.41
ITGB1-214ENST00000488427 ZCCHC8Q6NZY4 707 aaKnown RBP6.23□□□□□ -1.41
ITGB1-214ENST00000488427 TEPPQ6URK8 271 aa6.23□□□□□ -1.41
ITGB1-214ENST00000488427 HHIPL2Q6UWX4 724 aa6.23□□□□□ -1.41
ITGB1-214ENST00000488427 NIM1KQ8IY84 436 aa6.23□□□□□ -1.41
ITGB1-214ENST00000488427 PPM1KQ8N3J5 372 aa6.23□□□□□ -1.41
ITGB1-214ENST00000488427 ARRDC4Q8NCT1 418 aa6.23□□□□□ -1.41
ITGB1-214ENST00000488427 DACT3Q96B18 629 aaPredicted RBP6.23□□□□□ -1.41
ITGB1-214ENST00000488427 MFSD3Q96ES6 412 aa6.23□□□□□ -1.41
ITGB1-214ENST00000488427 IRF2BPLQ9H1B7 796 aa6.23□□□□□ -1.41
ITGB1-214ENST00000488427 BCAS3Q9H6U6 928 aa6.23□□□□□ -1.41
ITGB1-214ENST00000488427 RIC8BQ9NVN3 520 aa6.23□□□□□ -1.41
ITGB1-214ENST00000488427 PPP1R12AO14974 1030 aaPredicted RBP6.22□□□□□ -1.41
ITGB1-214ENST00000488427 NKRFO15226 690 aaKnown RBP eCLIP6.22□□□□□ -1.41
ITGB1-214ENST00000488427 CLASP2O75122 1294 aaKnown RBP6.22□□□□□ -1.41
ITGB1-214ENST00000488427 C8BP07358 591 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 MC3RP41968 323 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 STAT5AP42229 794 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 TMEM177Q53S58 311 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 PLEKHG4Q58EX7 1191 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 BTBD8Q5XKL5 378 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 SDE2Q6IQ49 451 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 TMEFF1Q8IYR6 380 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 LINC00482Q8N8I6 264 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 IGSF22Q8N9C0 903 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 LINC01356Q8N9X3 169 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 WDR48Q8TAF3 677 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 ZBTB8AQ96BR9 441 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 SCLYQ96I15 445 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 BOCQ9BWV1 1114 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 SAMD15Q9P1V8 674 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 CD2APQ9Y5K6 639 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 ERCC6L2Q5T890 1561 aa6.22□□□□□ -1.41
ITGB1-214ENST00000488427 ZNF561-AS1K7EIQ3 104 aa6.21□□□□□ -1.42
ITGB1-214ENST00000488427 SASH1O94885 1247 aa6.21□□□□□ -1.42
ITGB1-214ENST00000488427 CHGBP05060 677 aa6.21□□□□□ -1.42
ITGB1-214ENST00000488427 ENO2P09104 434 aaPredicted RBP6.21□□□□□ -1.42
ITGB1-214ENST00000488427 PTPN1P18031 435 aaKnown RBP6.21□□□□□ -1.42
ITGB1-214ENST00000488427 HERVK_113P62684 666 aa6.21□□□□□ -1.42
ITGB1-214ENST00000488427 CFAP100Q494V2 611 aa6.21□□□□□ -1.42
ITGB1-214ENST00000488427 FGD2Q7Z6J4 655 aa6.21□□□□□ -1.42
ITGB1-214ENST00000488427 KIAA0907Q7Z7F0 614 aaPredicted RBP6.21□□□□□ -1.42
ITGB1-214ENST00000488427 SAPCD2Q86UD0 394 aa6.21□□□□□ -1.42
ITGB1-214ENST00000488427 OSTM1Q86WC4 334 aa6.21□□□□□ -1.42
ITGB1-214ENST00000488427 PTRH1Q86Y79 214 aaKnown RBP6.21□□□□□ -1.42
ITGB1-214ENST00000488427 KIF18BQ86Y91 864 aa6.21□□□□□ -1.42
ITGB1-214ENST00000488427 CISD2Q8N5K1 135 aaKnown RBP6.21□□□□□ -1.42
ITGB1-214ENST00000488427 FNIP1Q8TF40 1166 aa6.21□□□□□ -1.42
ITGB1-214ENST00000488427 E2F7Q96AV8 911 aa6.21□□□□□ -1.42
ITGB1-214ENST00000488427 WNK4Q96J92 1243 aa6.21□□□□□ -1.42
ITGB1-214ENST00000488427 C11orf84Q9BUA3 381 aaPredicted RBP6.21□□□□□ -1.42
ITGB1-214ENST00000488427 DLL4Q9NR61 685 aa6.21□□□□□ -1.42
ITGB1-214ENST00000488427 ARHGAP28Q9P2N2 729 aa6.21□□□□□ -1.42
ITGB1-214ENST00000488427 CBLCQ9ULV8 474 aa6.21□□□□□ -1.42
ITGB1-214ENST00000488427 ZKSCAN5Q9Y2L8 839 aa6.21□□□□□ -1.42
ITGB1-214ENST00000488427 COQ6Q9Y2Z9 468 aa6.21□□□□□ -1.42
ITGB1-214ENST00000488427 TNPO3Q9Y5L0 923 aaKnown RBP6.21□□□□□ -1.42
ITGB1-214ENST00000488427 DNAJC8O75937 253 aaPredicted RBP6.2□□□□□ -1.42
ITGB1-214ENST00000488427 FBXO21O94952 628 aa6.2□□□□□ -1.42
ITGB1-214ENST00000488427 HOXA5P20719 270 aa6.2□□□□□ -1.42
ITGB1-214ENST00000488427 HTRA3P83110 453 aa6.2□□□□□ -1.42
ITGB1-214ENST00000488427 GRIN1Q05586 938 aa6.2□□□□□ -1.42
ITGB1-214ENST00000488427 SART3Q15020 963 aaKnown RBP6.2□□□□□ -1.42
ITGB1-214ENST00000488427 ZNF174Q15697 407 aa6.2□□□□□ -1.42
ITGB1-214ENST00000488427 CR1LQ2VPA4 569 aa6.2□□□□□ -1.42
ITGB1-214ENST00000488427 DPP8Q6V1X1 898 aaPredicted RBP6.2□□□□□ -1.42
ITGB1-214ENST00000488427 FAM124AQ86V42 546 aa6.2□□□□□ -1.42
ITGB1-214ENST00000488427 CHST14Q8NCH0 376 aa6.2□□□□□ -1.42
ITGB1-214ENST00000488427 FBXO41Q8TF61 875 aa6.2□□□□□ -1.42
ITGB1-214ENST00000488427 SCYL1Q96KG9 808 aa6.2□□□□□ -1.42
ITGB1-214ENST00000488427 CD244Q9BZW8 370 aa6.2□□□□□ -1.42
ITGB1-214ENST00000488427 PCIF1Q9H4Z3 704 aa6.2□□□□□ -1.42
ITGB1-214ENST00000488427 KANSL2Q9H9L4 492 aa6.2□□□□□ -1.42
ITGB1-214ENST00000488427 KCNH7Q9NS40 1196 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms