RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 CUL4BQ13620 913 aa14.24□□□□□ -0.13
NELFE-209ENST00000488426 PLS1Q14651 629 aa14.24□□□□□ -0.13
NELFE-209ENST00000488426 HAUS3Q68CZ6 603 aa14.24□□□□□ -0.13
NELFE-209ENST00000488426 RNF207Q6ZRF8 634 aa14.24□□□□□ -0.13
NELFE-209ENST00000488426 PLA2G4DQ86XP0 818 aa14.24□□□□□ -0.13
NELFE-209ENST00000488426 ERMNQ8TAM6 284 aa14.24□□□□□ -0.13
NELFE-209ENST00000488426 GTF3C2Q8WUA4 911 aaPredicted RBP14.24□□□□□ -0.13
NELFE-209ENST00000488426 STAMQ92783 540 aa14.24□□□□□ -0.13
NELFE-209ENST00000488426 PNMA5Q96PV4 448 aa14.24□□□□□ -0.13
NELFE-209ENST00000488426 SPATC1LQ9H0A9 340 aa14.24□□□□□ -0.13
NELFE-209ENST00000488426 SZT2Q5T011 3432 aa14.24□□□□□ -0.13
NELFE-209ENST00000488426 MEIS1O00470 390 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 RPN1P04843 607 aaKnown RBP14.23□□□□□ -0.13
NELFE-209ENST00000488426 XRCC5P13010 732 aaKnown RBP14.23□□□□□ -0.13
NELFE-209ENST00000488426 ERCC3P19447 782 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 CASP1P29466 404 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 CCND3P30281 292 aaPredicted RBP14.23□□□□□ -0.13
NELFE-209ENST00000488426 RPS6P62753 249 aaKnown RBP14.23□□□□□ -0.13
NELFE-209ENST00000488426 MYL5Q02045 173 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 MAP2K5Q13163 448 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 KCNB1Q14721 858 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 MAP3K21Q5TCX8 1036 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 PCNX4Q63HM2 1172 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 LRRC15Q8TF66 581 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 PLIN2Q99541 437 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 LRRC27Q9C0I9 530 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.23□□□□□ -0.13
NELFE-209ENST00000488426 LAMA3Q16787 3333 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 TFRCP02786 760 aaKnown RBP14.23□□□□□ -0.13
NELFE-209ENST00000488426 PRKAR2AP13861 404 aaKnown RBP14.23□□□□□ -0.13
NELFE-209ENST00000488426 ERCC5P28715 1186 aaPredicted RBP14.23□□□□□ -0.13
NELFE-209ENST00000488426 CCT6AP40227 531 aaKnown RBP14.23□□□□□ -0.13
NELFE-209ENST00000488426 PLCB2Q00722 1185 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 PRPF38BQ5VTL8 546 aaKnown RBP14.23□□□□□ -0.13
NELFE-209ENST00000488426 SLC30A10Q6XR72 485 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 SV2BQ7L1I2 683 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 CYP2W1Q8TAV3 490 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 DIS3LQ8TF46 1054 aaKnown RBP14.23□□□□□ -0.13
NELFE-209ENST00000488426 LARP4BQ92615 738 aaKnown RBP14.23□□□□□ -0.13
NELFE-209ENST00000488426 SLC5A5Q92911 643 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 GJA10Q969M2 543 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 C7orf25Q9BPX7 421 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 MXRA8Q9BRK3 442 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 GTPBP4Q9BZE4 634 aaKnown RBP14.23□□□□□ -0.13
NELFE-209ENST00000488426 CRISPLD2Q9H0B8 497 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 BLZF1Q9H2G9 400 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 ACAD9Q9H845 621 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 BLOC1S4Q9NUP1 217 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 VAV3Q9UKW4 847 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 RIPK3Q9Y572 518 aa14.23□□□□□ -0.13
NELFE-209ENST00000488426 AP5Z1O43299 807 aa14.22□□□□□ -0.13
NELFE-209ENST00000488426 COBLO75128 1261 aa14.22□□□□□ -0.13
NELFE-209ENST00000488426 STAT3P40763 770 aa14.22□□□□□ -0.13
NELFE-209ENST00000488426 RGS2P41220 211 aa14.22□□□□□ -0.13
NELFE-209ENST00000488426 MNX1P50219 401 aaPredicted RBP14.22□□□□□ -0.13
NELFE-209ENST00000488426 CCNA1P78396 465 aa14.22□□□□□ -0.13
NELFE-209ENST00000488426 GRB14Q14449 540 aa14.22□□□□□ -0.13
NELFE-209ENST00000488426 NCAPHQ15003 741 aa14.22□□□□□ -0.13
NELFE-209ENST00000488426 XRRA1Q6P2D8 792 aa14.22□□□□□ -0.13
NELFE-209ENST00000488426 NSMFQ6X4W1 530 aa14.22□□□□□ -0.13
NELFE-209ENST00000488426 KCTD17Q8N5Z5 321 aa14.22□□□□□ -0.13
NELFE-209ENST00000488426 SOCS4Q8WXH5 440 aa14.22□□□□□ -0.13
NELFE-209ENST00000488426 RAD54LQ92698 747 aa14.22□□□□□ -0.13
NELFE-209ENST00000488426 CCDC47Q96A33 483 aaKnown RBP14.22□□□□□ -0.13
NELFE-209ENST00000488426 TRIM44Q96DX7 344 aaPredicted RBP14.22□□□□□ -0.13
NELFE-209ENST00000488426 TRIM9Q9C026 710 aa14.22□□□□□ -0.13
NELFE-209ENST00000488426 PCDH10Q9P2E7 1040 aa14.22□□□□□ -0.13
NELFE-209ENST00000488426 PPP2R5CQ13362 524 aa14.21□□□□□ -0.13
NELFE-209ENST00000488426 ZNF658Q5TYW1 1059 aaPredicted RBP14.21□□□□□ -0.13
NELFE-209ENST00000488426 CNNM4Q6P4Q7 775 aa14.21□□□□□ -0.13
NELFE-209ENST00000488426 CHST13Q8NET6 341 aa14.21□□□□□ -0.13
NELFE-209ENST00000488426 WDR11Q9BZH6 1224 aa14.21□□□□□ -0.13
NELFE-209ENST00000488426 HMX1Q9NP08 348 aaPredicted RBP14.21□□□□□ -0.13
NELFE-209ENST00000488426 PXMP2Q9NR77 195 aa14.21□□□□□ -0.13
NELFE-209ENST00000488426 UBIAD1Q9Y5Z9 338 aa14.21□□□□□ -0.13
NELFE-209ENST00000488426 SLC15A5A6NIM6 579 aa14.21□□□□□ -0.14
NELFE-209ENST00000488426 PSMD10O75832 226 aa14.21□□□□□ -0.14
NELFE-209ENST00000488426 IGHA2P01877 340 aa14.21□□□□□ -0.14
NELFE-209ENST00000488426 RPA1P27694 616 aa14.21□□□□□ -0.14
NELFE-209ENST00000488426 ADORA2AP29274 412 aa14.21□□□□□ -0.14
NELFE-209ENST00000488426 CYP2C19P33261 490 aa14.21□□□□□ -0.14
NELFE-209ENST00000488426 BAATQ14032 418 aaPredicted RBP14.21□□□□□ -0.14
NELFE-209ENST00000488426 HS1BP3Q53T59 392 aa14.21□□□□□ -0.14
NELFE-209ENST00000488426 LRCH2Q5VUJ6 765 aa14.21□□□□□ -0.14
NELFE-209ENST00000488426 NCAPH2Q6IBW4 605 aa14.21□□□□□ -0.14
NELFE-209ENST00000488426 NCAPG2Q86XI2 1143 aa14.21□□□□□ -0.14
NELFE-209ENST00000488426 ENOX1Q8TC92 643 aaKnown RBP14.21□□□□□ -0.14
NELFE-209ENST00000488426 PAWRQ96IZ0 340 aaKnown RBP14.21□□□□□ -0.14
NELFE-209ENST00000488426 TAAR1Q96RJ0 339 aa14.21□□□□□ -0.14
NELFE-209ENST00000488426 RMDN3Q96TC7 470 aa14.21□□□□□ -0.14
NELFE-209ENST00000488426 RIT2Q99578 217 aa14.21□□□□□ -0.14
NELFE-209ENST00000488426 FBXO40Q9UH90 709 aa14.21□□□□□ -0.14
NELFE-209ENST00000488426 KLRC4O43908 158 aa14.2□□□□□ -0.14
NELFE-209ENST00000488426 RHOBTB3O94955 611 aa14.2□□□□□ -0.14
NELFE-209ENST00000488426 ZNF75DP51815 510 aa14.2□□□□□ -0.14
NELFE-209ENST00000488426 PGM5Q15124 567 aa14.2□□□□□ -0.14
NELFE-209ENST00000488426 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.2□□□□□ -0.14
NELFE-209ENST00000488426 RIOX2Q8IUF8 465 aa14.2□□□□□ -0.14
NELFE-209ENST00000488426 TRPV1Q8NER1 839 aa14.2□□□□□ -0.14
NELFE-209ENST00000488426 IL31RAQ8NI17 732 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms