RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 NDUFA13Q9P0J0 144 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 HMG20BQ9P0W2 317 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 ASAP2O43150 1006 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 TJP3O95049 919 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 OXSR1O95747 527 aaPredicted RBP6.92□□□□□ -1.3
SIK3-212ENST00000488337 UBASH3AP57075 661 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 MTX1Q13505 466 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 NECTIN1Q15223 517 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 FAM117BQ6P1L5 589 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 APPBP2Q92624 585 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 CEP295NLQ96MC4 621 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 RNPEPL1Q9HAU8 725 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 TTC7AQ9ULT0 858 aaPredicted RBP6.92□□□□□ -1.3
SIK3-212ENST00000488337 USP20Q9Y2K6 914 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 BICDL2A1A5D9 508 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 H0YGN5 161 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 GLI1P08151 1106 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 PABPC4LP0CB38 370 aaKnown RBP6.92□□□□□ -1.3
SIK3-212ENST00000488337 POTEIP0CG38 1075 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 ZNF18P17022 549 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 TMOD1P28289 359 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 PBX1P40424 430 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 EPHB4P54760 987 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 EAPPQ56P03 285 aaPredicted RBP6.92□□□□□ -1.3
SIK3-212ENST00000488337 RIC3Q7Z5B4 369 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 TBC1D1Q86TI0 1168 aaPredicted RBP6.92□□□□□ -1.3
SIK3-212ENST00000488337 RAB11FIP4Q86YS3 637 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 CYP4X1Q8N118 509 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 RBM46Q8TBY0 533 aaKnown RBP6.92□□□□□ -1.3
SIK3-212ENST00000488337 SPOCK2Q92563 424 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 UTP4Q969X6 686 aaKnown RBP6.92□□□□□ -1.3
SIK3-212ENST00000488337 CENPTQ96BT3 561 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 TUT1Q9H6E5 874 aaKnown RBP6.92□□□□□ -1.3
SIK3-212ENST00000488337 MAP3K2Q9Y2U5 619 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 NFS1Q9Y697 457 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 FAM25EA8MYX2 175 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 PDE2AO00408 941 aaPredicted RBP6.91□□□□□ -1.3
SIK3-212ENST00000488337 CCNB1P14635 433 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 FOSL1P15407 271 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 S100A5P33763 92 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 ZC3H6P61129 1189 aaKnown RBP6.91□□□□□ -1.3
SIK3-212ENST00000488337 MRPS25P82663 173 aaKnown RBP6.91□□□□□ -1.3
SIK3-212ENST00000488337 AKAP17AQ02040 695 aaKnown RBP6.91□□□□□ -1.3
SIK3-212ENST00000488337 BNIP1Q12981 228 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 CRY1Q16526 586 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 AGAP9Q5VTM2 703 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 ZNF662Q6ZS27 426 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 TREML1Q86YW5 311 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 FNDC8Q8TC99 324 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 GAB3Q8WWW8 586 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 MAP4K1Q92918 833 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 C8orf37Q96NL8 207 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 TMBIM4Q9HC24 238 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 LZTFL1Q9NQ48 299 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 TUBE1Q9UJT0 475 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 LRCH1Q9Y2L9 728 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 PIK3C2BO00750 1634 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 FOXD2O60548 495 aaPredicted RBP6.91□□□□□ -1.3
SIK3-212ENST00000488337 CYP1A2P05177 515 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 PDHA1P08559 390 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 SKIP12755 728 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 RPS6KB1P23443 525 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 MSH2P43246 934 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 ZNF131P52739 623 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 GPR162Q16538 588 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 SND1Q7KZF4 910 aaKnown RBP eCLIP6.91□□□□□ -1.3
SIK3-212ENST00000488337 PNMA8AQ86V59 439 aaPredicted RBP6.91□□□□□ -1.3
SIK3-212ENST00000488337 LURAP1LQ8IV03 231 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 FAM20CQ8IXL6 584 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 SPERTQ8NA61 448 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 SLC16A10Q8TF71 515 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 RAPGEF5Q92565 580 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 MIS12Q9H081 205 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 PAG1Q9NWQ8 432 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 GIT1Q9Y2X7 761 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 ITSN1Q15811 1721 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 POTEFA5A3E0 1075 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 SPTLC1O15269 473 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 ADAM23O75077 832 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 ZMYND10O75800 440 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 CDK4P11802 303 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 GM2AP17900 193 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 CACNA2D1P54289 1103 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 ZC2HC1CQ53FD0 456 aaPredicted RBP6.91□□□□□ -1.3
SIK3-212ENST00000488337 BEND3Q5T5X7 828 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 GKAP1Q5VSY0 366 aaPredicted RBP6.91□□□□□ -1.3
SIK3-212ENST00000488337 PCNX4Q63HM2 1172 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 SPECC1LQ69YQ0 1117 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 ZNF530Q6P9A1 599 aaPredicted RBP6.91□□□□□ -1.3
SIK3-212ENST00000488337 LVRNQ6Q4G3 990 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 UBE2Q1Q7Z7E8 422 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 KIAA1257Q9ULG3 409 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 CAPN6Q9Y6Q1 641 aa6.91□□□□□ -1.3
SIK3-212ENST00000488337 MAGEB3O15480 346 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 ECE2O60344 883 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 CYP2C9P11712 490 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 HMGB2P26583 209 aaKnown RBP6.9□□□□□ -1.3
SIK3-212ENST00000488337 TUBA1BP68363 451 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 ARL13BQ3SXY8 428 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 RABL6Q3YEC7 729 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms