RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 TSPYL2Q9H2G4 693 aaPredicted RBP25.88■■□□□ 1.73
PTPN4-211ENST00000488279 NAP1L2Q9ULW6 460 aaPredicted RBP25.88■■□□□ 1.73
PTPN4-211ENST00000488279 NRCAMQ92823 1304 aa25.88■■□□□ 1.73
PTPN4-211ENST00000488279 REV3LO60673 3130 aa25.87■■□□□ 1.73
PTPN4-211ENST00000488279 ARHGEF15O94989 841 aa25.87■■□□□ 1.73
PTPN4-211ENST00000488279 GJB5O95377 273 aa25.87■■□□□ 1.73
PTPN4-211ENST00000488279 FOSP01100 380 aaPredicted RBP25.87■■□□□ 1.73
PTPN4-211ENST00000488279 POU3F3P20264 500 aaPredicted RBP25.87■■□□□ 1.73
PTPN4-211ENST00000488279 RCAN1P53805 252 aa25.87■■□□□ 1.73
PTPN4-211ENST00000488279 ARHGAP4P98171 946 aa25.87■■□□□ 1.73
PTPN4-211ENST00000488279 MICALL1Q8N3F8 863 aa25.87■■□□□ 1.73
PTPN4-211ENST00000488279 PKD2L1Q9P0L9 805 aa25.87■■□□□ 1.73
PTPN4-211ENST00000488279 THEGQ9P2T0 379 aa25.87■■□□□ 1.73
PTPN4-211ENST00000488279 GSTTP1A0A1W2PQM5 241 aa25.86■■□□□ 1.73
PTPN4-211ENST00000488279 hCG_1984214I3L0E3 225 aa25.86■■□□□ 1.73
PTPN4-211ENST00000488279 ADAM17P78536 824 aa25.86■■□□□ 1.73
PTPN4-211ENST00000488279 PLEKHG4Q58EX7 1191 aa25.86■■□□□ 1.73
PTPN4-211ENST00000488279 TYW1BQ6NUM6 668 aa25.86■■□□□ 1.73
PTPN4-211ENST00000488279 ZNF713Q8N859 430 aaPredicted RBP25.86■■□□□ 1.73
PTPN4-211ENST00000488279 LMBR1Q8WVP7 490 aa25.86■■□□□ 1.73
PTPN4-211ENST00000488279 GLG1Q92896 1179 aa25.86■■□□□ 1.73
PTPN4-211ENST00000488279 KCNB2Q92953 911 aa25.86■■□□□ 1.73
PTPN4-211ENST00000488279 MXRA8Q9BRK3 442 aa25.86■■□□□ 1.73
PTPN4-211ENST00000488279 GLT8D2Q9H1C3 349 aa25.86■■□□□ 1.73
PTPN4-211ENST00000488279 FAM217BQ9NTX9 383 aaPredicted RBP25.86■■□□□ 1.73
PTPN4-211ENST00000488279 BARHL2Q9NY43 387 aa25.86■■□□□ 1.73
PTPN4-211ENST00000488279 ERAP1Q9NZ08 941 aa25.86■■□□□ 1.73
PTPN4-211ENST00000488279 XIRP2A4UGR9 3374 aa25.86■■□□□ 1.73
PTPN4-211ENST00000488279 CCDC196A0A1B0GTZ2 297 aa25.85■■□□□ 1.73
PTPN4-211ENST00000488279 LCHNA4D1U4 455 aa25.85■■□□□ 1.73
PTPN4-211ENST00000488279 SMCO2A6NFE2 343 aa25.85■■□□□ 1.73
PTPN4-211ENST00000488279 EPOPA6NHQ4 379 aa25.85■■□□□ 1.73
PTPN4-211ENST00000488279 ADCY7P51828 1080 aa25.85■■□□□ 1.73
PTPN4-211ENST00000488279 SEPT8Q92599 483 aa25.85■■□□□ 1.73
PTPN4-211ENST00000488279 SMARCAD1Q9H4L7 1026 aa25.85■■□□□ 1.73
PTPN4-211ENST00000488279 MTCH2Q9Y6C9 303 aa25.85■■□□□ 1.73
PTPN4-211ENST00000488279 STXBP3O00186 592 aa25.84■■□□□ 1.73
PTPN4-211ENST00000488279 AMHP03971 560 aa25.84■■□□□ 1.73
PTPN4-211ENST00000488279 CTSHP09668 335 aa25.84■■□□□ 1.73
PTPN4-211ENST00000488279 CDC27P30260 824 aa25.84■■□□□ 1.73
PTPN4-211ENST00000488279 HSPA4P34932 840 aa25.84■■□□□ 1.73
PTPN4-211ENST00000488279 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.84■■□□□ 1.73
PTPN4-211ENST00000488279 Q6ZUG5 572 aa25.84■■□□□ 1.73
PTPN4-211ENST00000488279 JAKMIP1Q96N16 626 aaKnown RBP25.84■■□□□ 1.73
PTPN4-211ENST00000488279 ASB2Q96Q27 587 aa25.84■■□□□ 1.73
PTPN4-211ENST00000488279 KCNH7Q9NS40 1196 aa25.84■■□□□ 1.73
PTPN4-211ENST00000488279 CPA1P15085 419 aa25.83■■□□□ 1.73
PTPN4-211ENST00000488279 ADD1P35611 737 aaKnown RBP25.83■■□□□ 1.73
PTPN4-211ENST00000488279 METAP2P50579 478 aaKnown RBP eCLIP25.83■■□□□ 1.73
PTPN4-211ENST00000488279 MRPS5P82675 430 aaKnown RBP25.83■■□□□ 1.73
PTPN4-211ENST00000488279 FAM117BQ6P1L5 589 aa25.83■■□□□ 1.73
PTPN4-211ENST00000488279 CYP2W1Q8TAV3 490 aa25.83■■□□□ 1.73
PTPN4-211ENST00000488279 JPH1Q9HDC5 661 aaPredicted RBP25.83■■□□□ 1.73
PTPN4-211ENST00000488279 MARK3P27448 753 aa25.82■■□□□ 1.72
PTPN4-211ENST00000488279 PPFIA1Q13136 1202 aa25.82■■□□□ 1.72
PTPN4-211ENST00000488279 CEP55Q53EZ4 464 aa25.82■■□□□ 1.72
PTPN4-211ENST00000488279 TAF2Q6P1X5 1199 aa25.82■■□□□ 1.72
PTPN4-211ENST00000488279 BLOC1S2Q6QNY1 142 aa25.82■■□□□ 1.72
PTPN4-211ENST00000488279 MYOCDQ8IZQ8 938 aa25.82■■□□□ 1.72
PTPN4-211ENST00000488279 PGBD1Q96JS3 809 aa25.82■■□□□ 1.72
PTPN4-211ENST00000488279 SDF4Q9BRK5 362 aa25.82■■□□□ 1.72
PTPN4-211ENST00000488279 ANO3Q9BYT9 981 aa25.82■■□□□ 1.72
PTPN4-211ENST00000488279 SLC9A2Q9UBY0 812 aa25.82■■□□□ 1.72
PTPN4-211ENST00000488279 INSL6Q9Y581 213 aa25.82■■□□□ 1.72
PTPN4-211ENST00000488279 SNX14Q9Y5W7 946 aa25.82■■□□□ 1.72
PTPN4-211ENST00000488279 RBAK-RBAKDNI3L0D1 243 aa25.81■■□□□ 1.72
PTPN4-211ENST00000488279 APOBRQ0VD83 1088 aa25.81■■□□□ 1.72
PTPN4-211ENST00000488279 AP3B2Q13367 1082 aa25.81■■□□□ 1.72
PTPN4-211ENST00000488279 MKRN4PQ13434 485 aaPredicted RBP25.81■■□□□ 1.72
PTPN4-211ENST00000488279 SKIV2LQ15477 1246 aaKnown RBP25.81■■□□□ 1.72
PTPN4-211ENST00000488279 GRIK4Q16099 956 aa25.81■■□□□ 1.72
PTPN4-211ENST00000488279 FAM26DQ5JW98 314 aa25.81■■□□□ 1.72
PTPN4-211ENST00000488279 RPAINQ86UA6 219 aa25.81■■□□□ 1.72
PTPN4-211ENST00000488279 BRF1Q92994 677 aa25.81■■□□□ 1.72
PTPN4-211ENST00000488279 REC8O95072 547 aa25.8■■□□□ 1.72
PTPN4-211ENST00000488279 GRB10Q13322 594 aa25.8■■□□□ 1.72
PTPN4-211ENST00000488279 PFKFB3Q16875 520 aaPredicted RBP25.8■■□□□ 1.72
PTPN4-211ENST00000488279 SPRED2Q7Z698 418 aa25.8■■□□□ 1.72
PTPN4-211ENST00000488279 RSPH3Q86UC2 560 aa25.8■■□□□ 1.72
PTPN4-211ENST00000488279 APBB2Q92870 758 aa25.8■■□□□ 1.72
PTPN4-211ENST00000488279 TNPO1Q92973 898 aaKnown RBP25.8■■□□□ 1.72
PTPN4-211ENST00000488279 TGS1Q96RS0 853 aaKnown RBP25.8■■□□□ 1.72
PTPN4-211ENST00000488279 AZI2Q9H6S1 392 aa25.8■■□□□ 1.72
PTPN4-211ENST00000488279 TMEM260Q9NX78 707 aa25.8■■□□□ 1.72
PTPN4-211ENST00000488279 LINC01553A4QN01 128 aa25.79■■□□□ 1.72
PTPN4-211ENST00000488279 MEIS1O00470 390 aa25.79■■□□□ 1.72
PTPN4-211ENST00000488279 ARP10275 920 aa25.79■■□□□ 1.72
PTPN4-211ENST00000488279 PSMA5P28066 241 aa25.79■■□□□ 1.72
PTPN4-211ENST00000488279 ZNF76P36508 570 aa25.79■■□□□ 1.72
PTPN4-211ENST00000488279 SREBF1P36956 1147 aa25.79■■□□□ 1.72
PTPN4-211ENST00000488279 CLK2P49760 499 aaKnown RBP25.79■■□□□ 1.72
PTPN4-211ENST00000488279 ERVK-21P61565 698 aa25.79■■□□□ 1.72
PTPN4-211ENST00000488279 KRT40Q6A162 431 aa25.79■■□□□ 1.72
PTPN4-211ENST00000488279 FBXL16Q8N461 479 aa25.79■■□□□ 1.72
PTPN4-211ENST00000488279 OSBPL7Q9BZF2 842 aa25.79■■□□□ 1.72
PTPN4-211ENST00000488279 AGO4Q9HCK5 861 aaKnown RBP25.79■■□□□ 1.72
PTPN4-211ENST00000488279 TUBE1Q9UJT0 475 aa25.79■■□□□ 1.72
PTPN4-211ENST00000488279 NFASCO94856 1347 aa25.79■■□□□ 1.72
PTPN4-211ENST00000488279 DOCK5Q9H7D0 1870 aa25.79■■□□□ 1.72
PTPN4-211ENST00000488279 CHRNA1P02708 482 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms