RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 ATF5Q9Y2D1 282 aaPredicted RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 JRKLQ9Y4A0 524 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 MYH2Q9UKX2 1941 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 DDX60LQ5H9U9 1706 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 COL2A1P02458 1487 aaPredicted RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 LRRC37AA6NMS7 1700 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 GOLGA6L10A6NI86 522 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 LRRC53A6NM62 1247 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 PDXKO00764 312 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 C21orf2O43822 256 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 H2AFXP16104 143 aaPredicted RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 FECHP22830 423 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 ANXA13P27216 316 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 PSMC2P35998 433 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 SREBF1P36956 1147 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 NOP2P46087 812 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 RAD51AP2Q09MP3 1159 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 PABPC4Q13310 644 aaKnown RBP eCLIP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 ENOX2Q16206 610 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 CFAP221Q4G0U5 840 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 HYIQ5T013 277 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 FAM83BQ5T0W9 1011 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 CC2D1AQ6P1N0 951 aaPredicted RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 TATDN1Q6P1N9 297 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 ZNF662Q6ZS27 426 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 ZNF507Q8TCN5 953 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 DRC1Q96MC2 740 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 DUSP9Q99956 384 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 SEMA6BQ9H3T3 888 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 GINM1Q9NU53 330 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 TYW1Q9NV66 732 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 SEL1LQ9UBV2 794 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 ZNF70Q9UC06 446 aaPredicted RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 CCPG1Q9ULG6 757 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 SSU72P8A0A1W2PR75 194 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 CLRN2A0PK11 232 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 TARSL2A2RTX5 802 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 FAM196BA6NMK8 535 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 EIF3DO15371 548 aaKnown RBP eCLIP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 OPA1O60313 960 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 HSF2BPO75031 334 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 CYP3A4P08684 503 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 PNMA6AP0CW24 399 aaPredicted RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 FERP16591 822 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 RPA1P27694 616 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 OAS2P29728 719 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 CHRNA5P30532 468 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 STAT3P40763 770 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 CLK2P49760 499 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 PMS1P54277 932 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 SNAP25P60880 206 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 ARID5AQ03989 594 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 NFIAQ12857 509 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 NAA30Q147X3 362 aaPredicted RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 ZYXQ15942 572 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 MEA1Q16626 185 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 EXOC3L4Q17RC7 722 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 KNOP1Q1ED39 458 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 DCAF15Q66K64 600 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 NLRX1Q86UT6 975 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 SFR1Q86XK3 245 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 SPICE1Q8N0Z3 855 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 RNF10Q8N5U6 811 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 CALR3Q96L12 384 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 MPHOSPH6Q99547 160 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 EIF2AK1Q9BQI3 630 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 NLRC4Q9NPP4 1024 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 PICK1Q9NRD5 415 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 BLOC1S4Q9NUP1 217 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 CALCOCO1Q9P1Z2 691 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 KCNG1Q9UIX4 513 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 TAF1P21675 1872 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 POTEFA5A3E0 1075 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 DDTLA6NHG4 134 aaPredicted RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 MEIS1O00470 390 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 ASNSP08243 561 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 POTEIP0CG38 1075 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 HOXA13P31271 388 aaPredicted RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 ABCD1P33897 745 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 STAT1P42224 750 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 SMTNP53814 917 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 SMC1AQ14683 1233 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 SLC15A2Q16348 729 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 LONRF2Q1L5Z9 754 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 C8orf74Q6P047 294 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 POTEGQ6S5H5 508 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 POTEEQ6S8J3 1075 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 RSRC2Q7L4I2 434 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 APTXQ7Z2E3 356 aaKnown RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 FAM178BQ8IXR5 827 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 SAMD3Q8N6K7 520 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 SYT2Q8N9I0 419 aaPredicted RBP2.91□□□□□ -1.94
C9orf72-205ENST00000488117 KIAA0895Q8NCT3 520 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 AGBL3Q8NEM8 1001 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 MTMR8Q96EF0 704 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 MTRQ99707 1265 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 TMEM206Q9H813 350 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 PARVGQ9HBI0 331 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 KCNMB3Q9NPA1 279 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 FAM198AQ9UFP1 575 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms