RNA–Protein interactions for RNA: ENST00000488032.1

PCGF3-212, Transcript of polycomb group ring finger 3, humanhuman

TSL 4

Gene PCGF3, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-212ENST00000488032 TBX1O43435 398 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 HIP1RO75146 1068 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 KRT38O76015 456 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 TBC1D8O95759 1140 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 CPP00450 1065 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 SCG5P05408 212 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 COL6A1P12109 1028 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 JUNBP17275 347 aaPredicted RBP5.05□□□□□ -1.6
PCGF3-212ENST00000488032 HOXC12P31275 282 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 NF2P35240 595 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 SSRP1Q08945 709 aaKnown RBP5.05□□□□□ -1.6
PCGF3-212ENST00000488032 SCRN1Q12765 414 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 KCTD2Q14681 263 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 PPP2R5AQ15172 486 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 MAP9Q49MG5 647 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 ACBD5Q5T8D3 534 aaPredicted RBP5.05□□□□□ -1.6
PCGF3-212ENST00000488032 HLA-DQA1Q5Y7H0 255 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 TTC19Q6DKK2 380 aaPredicted RBP5.05□□□□□ -1.6
PCGF3-212ENST00000488032 ZPBP2Q6X784 338 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 LEKR1Q6ZMV7 388 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 SPATC1Q76KD6 591 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 DPH6Q7L8W6 267 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 KRT77Q7Z794 578 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 NDUFAF2Q8N183 169 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 MYO1HQ8N1T3 1032 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 DNAAF4Q8WXU2 420 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 ZBTB10Q96DT7 871 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 MRFAP1L1Q96HT8 127 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 HHIPL1Q96JK4 782 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 PTCHD1Q96NR3 888 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 MPHOSPH6Q99547 160 aaKnown RBP5.05□□□□□ -1.6
PCGF3-212ENST00000488032 AARSD1Q9BTE6 412 aaKnown RBP5.05□□□□□ -1.6
PCGF3-212ENST00000488032 SPATA9Q9BWV2 254 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 LGR4Q9BXB1 951 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 SPC25Q9HBM1 224 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 IRAK4Q9NWZ3 460 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 SEPT10Q9P0V9 454 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 PCSK1NQ9UHG2 260 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 TMCC3Q9ULS5 477 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 MAFFQ9ULX9 164 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 ATP8A1Q9Y2Q0 1164 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 SCAPERQ9BY12 1400 aa5.05□□□□□ -1.6
PCGF3-212ENST00000488032 PIK3R4Q99570 1358 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 TRAV20A0A0B4J274 112 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 A0A1W2PQ45 241 aaPredicted RBP5.04□□□□□ -1.6
PCGF3-212ENST00000488032 A0A1W2PQY0 241 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 FAM221BA6H8Z2 402 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 TMEM110-MUSTN1A8MSY1 372 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 FADS2P1A8MWK0 482 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 CAND2O75155 1236 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 USP2O75604 605 aaPredicted RBP5.04□□□□□ -1.6
PCGF3-212ENST00000488032 FOSP01100 380 aaPredicted RBP5.04□□□□□ -1.6
PCGF3-212ENST00000488032 CAPNS1P04632 268 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 SNRPB2P08579 225 aaKnown RBP5.04□□□□□ -1.6
PCGF3-212ENST00000488032 TPM1P09493 284 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 FGFR1P11362 822 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 XBP1P17861 261 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 ITGB5P18084 799 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 GFRA1P56159 465 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 RTP1P59025 263 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 WASHC5Q12768 1159 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 ZBTB17Q13105 803 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 SNX17Q15036 470 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 E2F5Q15329 346 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 LONRF2Q1L5Z9 754 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 MUM1L1Q5H9M0 696 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 RNF187Q5TA31 235 aaPredicted RBP5.04□□□□□ -1.6
PCGF3-212ENST00000488032 CEP128Q6ZU80 1094 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 SDCCAG8Q86SQ7 713 aaPredicted RBP5.04□□□□□ -1.6
PCGF3-212ENST00000488032 LRRC49Q8IUZ0 686 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 CCDC89Q8N998 374 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 GIMAP1Q8WWP7 306 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 ATRIPQ8WXE1 791 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 MYLIPQ8WY64 445 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 CHMP4CQ96CF2 233 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 CDHR1Q96JP9 859 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 NEUROD6Q96NK8 337 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 NRDE2Q9H7Z3 1164 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 DIAPH3Q9NSV4 1193 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 COMMD8Q9NX08 183 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 EBF1Q9UH73 591 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 JRKLQ9Y4A0 524 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 KDRP35968 1356 aa5.04□□□□□ -1.6
PCGF3-212ENST00000488032 KDM2BQ8NHM5 1336 aa5.03□□□□□ -1.6
PCGF3-212ENST00000488032 WTIPA6NIX2 430 aaPredicted RBP5.03□□□□□ -1.6
PCGF3-212ENST00000488032 PRC1O43663 620 aa5.03□□□□□ -1.6
PCGF3-212ENST00000488032 PAPLNO95428 1278 aa5.03□□□□□ -1.6
PCGF3-212ENST00000488032 U2AF1L5P0DN76 240 aaPredicted RBP5.03□□□□□ -1.6
PCGF3-212ENST00000488032 PAMP19021 973 aa5.03□□□□□ -1.6
PCGF3-212ENST00000488032 CCNCP24863 283 aa5.03□□□□□ -1.6
PCGF3-212ENST00000488032 CLK1P49759 484 aaKnown RBP5.03□□□□□ -1.6
PCGF3-212ENST00000488032 CDR1P51861 262 aa5.03□□□□□ -1.6
PCGF3-212ENST00000488032 MNAT1P51948 309 aa5.03□□□□□ -1.6
PCGF3-212ENST00000488032 U2AF1Q01081 240 aaKnown RBP eCLIP5.03□□□□□ -1.6
PCGF3-212ENST00000488032 CCDC15Q0P6D6 951 aa5.03□□□□□ -1.6
PCGF3-212ENST00000488032 MAP4K2Q12851 820 aa5.03□□□□□ -1.6
PCGF3-212ENST00000488032 PDIA5Q14554 519 aa5.03□□□□□ -1.6
PCGF3-212ENST00000488032 SYCP1Q15431 976 aa5.03□□□□□ -1.6
PCGF3-212ENST00000488032 SLC14A2Q15849 920 aa5.03□□□□□ -1.6
PCGF3-212ENST00000488032 ZC3H12BQ5HYM0 836 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms