RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 LCHNA4D1U4 455 aa12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 hCG_1984214I3L0E3 225 aa12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 ADAMTS3O15072 1205 aa12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 HMGB1P09429 215 aaKnown RBP12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 TCF7P36402 384 aaPredicted RBP12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 APOBRQ0VD83 1088 aa12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 SYNE3Q6ZMZ3 975 aa12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 ZNF713Q8N859 430 aaPredicted RBP12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 PHOSPHO2Q8TCD6 241 aa12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 BRF1Q92994 677 aa12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 ATP6V0A1Q93050 837 aa12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 CDHR1Q96JP9 859 aa12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 OSBPL7Q9BZF2 842 aa12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 RNPEPQ9H4A4 650 aa12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 PRDM6Q9NQX0 595 aa12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 BARHL2Q9NY43 387 aa12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 ZNF215Q9UL58 517 aaPredicted RBP12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 TTC3P53804 2025 aa12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 GSTTP1A0A1W2PQM5 241 aa12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 CTSHP09668 335 aa12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 RPS6KB1P23443 525 aa12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 THPOP40225 353 aa12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 METAP2P50579 478 aaKnown RBP eCLIP12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 ADCY7P51828 1080 aa12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 TAP1Q03518 808 aa12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 UTP14CQ5TAP6 766 aaKnown RBP12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 Q6ZUG5 572 aa12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 TEX2Q8IWB9 1127 aa12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 FBXL16Q8N461 479 aa12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 GIMAP8Q8ND71 665 aaPredicted RBP12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 CYP2W1Q8TAV3 490 aa12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 CRYGNQ8WXF5 182 aa12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 ANO3Q9BYT9 981 aa12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 JADE2Q9NQC1 790 aa12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 SETD4Q9NVD3 440 aa12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 TMEM260Q9NX78 707 aa12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 PKD2L1Q9P0L9 805 aa12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 C5orf42Q9H799 3197 aa12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 FNDC1Q4ZHG4 1894 aaPredicted RBP12.85□□□□□ -0.35
RAB11FIP3-210ENST00000487899 CAND2O75155 1236 aa12.84□□□□□ -0.35
RAB11FIP3-210ENST00000487899 LGR5O75473 907 aa12.84□□□□□ -0.35
RAB11FIP3-210ENST00000487899 ADD1P35611 737 aaKnown RBP12.84□□□□□ -0.35
RAB11FIP3-210ENST00000487899 SREBF1P36956 1147 aa12.84□□□□□ -0.35
RAB11FIP3-210ENST00000487899 KCNJ6P48051 423 aa12.84□□□□□ -0.35
RAB11FIP3-210ENST00000487899 ITGB3BPQ13352 177 aaPredicted RBP12.84□□□□□ -0.35
RAB11FIP3-210ENST00000487899 PFKFB3Q16875 520 aaPredicted RBP12.84□□□□□ -0.35
RAB11FIP3-210ENST00000487899 PLEKHG4Q58EX7 1191 aa12.84□□□□□ -0.35
RAB11FIP3-210ENST00000487899 BLOC1S2Q6QNY1 142 aa12.84□□□□□ -0.35
RAB11FIP3-210ENST00000487899 PCYT2Q99447 389 aa12.84□□□□□ -0.35
RAB11FIP3-210ENST00000487899 JPH1Q9HDC5 661 aaPredicted RBP12.84□□□□□ -0.35
RAB11FIP3-210ENST00000487899 KCNH7Q9NS40 1196 aa12.84□□□□□ -0.35
RAB11FIP3-210ENST00000487899 V9GY48 417 aaPredicted RBP12.84□□□□□ -0.35
RAB11FIP3-210ENST00000487899 NCOR1O75376 2440 aa12.83□□□□□ -0.35
RAB11FIP3-210ENST00000487899 PLXNA4Q9HCM2 1894 aa12.83□□□□□ -0.36
RAB11FIP3-210ENST00000487899 ABHD14A-ACY1A0A1B0GW23 586 aa12.83□□□□□ -0.36
RAB11FIP3-210ENST00000487899 ESYT2A0FGR8 921 aa12.83□□□□□ -0.36
RAB11FIP3-210ENST00000487899 RSPH10B2B2RC85 870 aa12.83□□□□□ -0.36
RAB11FIP3-210ENST00000487899 REC8O95072 547 aa12.83□□□□□ -0.36
RAB11FIP3-210ENST00000487899 GJB5O95377 273 aa12.83□□□□□ -0.36
RAB11FIP3-210ENST00000487899 RSPH10BP0C881 870 aa12.83□□□□□ -0.36
RAB11FIP3-210ENST00000487899 SCG2P13521 617 aa12.83□□□□□ -0.36
RAB11FIP3-210ENST00000487899 ARHGAP4P98171 946 aa12.83□□□□□ -0.36
RAB11FIP3-210ENST00000487899 AP3B2Q13367 1082 aa12.83□□□□□ -0.36
RAB11FIP3-210ENST00000487899 PKN1Q16512 942 aa12.83□□□□□ -0.36
RAB11FIP3-210ENST00000487899 RUFY4Q6ZNE9 571 aa12.83□□□□□ -0.36
RAB11FIP3-210ENST00000487899 MXRA8Q9BRK3 442 aa12.83□□□□□ -0.36
RAB11FIP3-210ENST00000487899 EHMT1Q9H9B1 1298 aa12.83□□□□□ -0.36
RAB11FIP3-210ENST00000487899 CERS4Q9HA82 394 aa12.83□□□□□ -0.36
RAB11FIP3-210ENST00000487899 NFASCO94856 1347 aa12.83□□□□□ -0.36
RAB11FIP3-210ENST00000487899 IGLV3-22A0A075B6J6 115 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 MBLAC1A4D2B0 266 aaPredicted RBP12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 SMCO2A6NFE2 343 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 RFXAPO00287 272 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 TLL1O43897 1013 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 EFCAB14O75071 495 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 ARP10275 920 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 IGFBP4P22692 258 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 MARK3P27448 753 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 EVCP57679 992 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 PPFIA1Q13136 1202 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 TOB2Q14106 344 aaPredicted RBP12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 NTRK3Q16288 839 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 CEP55Q53EZ4 464 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 MARCH8Q5T0T0 291 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 DBF4BQ8NFT6 615 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 PHKBQ93100 1093 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 AGO4Q9HCK5 861 aaKnown RBP12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 ERAP1Q9NZ08 941 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 SLC9A2Q9UBY0 812 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 TUBE1Q9UJT0 475 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 NAP1L2Q9ULW6 460 aaPredicted RBP12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 NRCAMQ92823 1304 aa12.82□□□□□ -0.36
RAB11FIP3-210ENST00000487899 FAM86B1E9PN63 330 aa12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 LPXNO60711 386 aa12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 CCNE2O96020 404 aa12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 FOSP01100 380 aaPredicted RBP12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 FAM86B2P0C5J1 330 aa12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 POU3F3P20264 500 aaPredicted RBP12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 FGD1P98174 961 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms