RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 RIC8AQ9NPQ8 531 aa14.25□□□□□ -0.13
SREBF1-215ENST00000487401 CNTNAP5Q8WYK1 1306 aa14.24□□□□□ -0.13
SREBF1-215ENST00000487401 CCDC196A0A1B0GTZ2 297 aa14.24□□□□□ -0.13
SREBF1-215ENST00000487401 SMCO2A6NFE2 343 aa14.24□□□□□ -0.13
SREBF1-215ENST00000487401 hCG_1984214I3L0E3 225 aa14.24□□□□□ -0.13
SREBF1-215ENST00000487401 ARHGEF15O94989 841 aa14.24□□□□□ -0.13
SREBF1-215ENST00000487401 PPFIA1Q13136 1202 aa14.24□□□□□ -0.13
SREBF1-215ENST00000487401 RSPH3Q86UC2 560 aa14.24□□□□□ -0.13
SREBF1-215ENST00000487401 ZNF713Q8N859 430 aaPredicted RBP14.24□□□□□ -0.13
SREBF1-215ENST00000487401 LMBR1Q8WVP7 490 aa14.24□□□□□ -0.13
SREBF1-215ENST00000487401 ASB2Q96Q27 587 aa14.24□□□□□ -0.13
SREBF1-215ENST00000487401 SMARCAD1Q9H4L7 1026 aa14.24□□□□□ -0.13
SREBF1-215ENST00000487401 ERAP1Q9NZ08 941 aa14.24□□□□□ -0.13
SREBF1-215ENST00000487401 MTCH2Q9Y6C9 303 aa14.24□□□□□ -0.13
SREBF1-215ENST00000487401 EYSQ5T1H1 3165 aa14.24□□□□□ -0.13
SREBF1-215ENST00000487401 GSTTP1A0A1W2PQM5 241 aa14.23□□□□□ -0.13
SREBF1-215ENST00000487401 LCHNA4D1U4 455 aa14.23□□□□□ -0.13
SREBF1-215ENST00000487401 EPOPA6NHQ4 379 aa14.23□□□□□ -0.13
SREBF1-215ENST00000487401 STXBP3O00186 592 aa14.23□□□□□ -0.13
SREBF1-215ENST00000487401 POU3F3P20264 500 aaPredicted RBP14.23□□□□□ -0.13
SREBF1-215ENST00000487401 MARK3P27448 753 aa14.23□□□□□ -0.13
SREBF1-215ENST00000487401 ZNF76P36508 570 aa14.23□□□□□ -0.13
SREBF1-215ENST00000487401 METAP2P50579 478 aaKnown RBP eCLIP14.23□□□□□ -0.13
SREBF1-215ENST00000487401 RCAN1P53805 252 aa14.23□□□□□ -0.13
SREBF1-215ENST00000487401 FUT2Q10981 343 aa14.23□□□□□ -0.13
SREBF1-215ENST00000487401 PLEKHG4Q58EX7 1191 aa14.23□□□□□ -0.13
SREBF1-215ENST00000487401 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.23□□□□□ -0.13
SREBF1-215ENST00000487401 MYOCDQ8IZQ8 938 aa14.23□□□□□ -0.13
SREBF1-215ENST00000487401 JAKMIP1Q96N16 626 aaKnown RBP14.23□□□□□ -0.13
SREBF1-215ENST00000487401 MXRA8Q9BRK3 442 aa14.23□□□□□ -0.13
SREBF1-215ENST00000487401 SDF4Q9BRK5 362 aa14.23□□□□□ -0.13
SREBF1-215ENST00000487401 AZI2Q9H6S1 392 aa14.23□□□□□ -0.13
SREBF1-215ENST00000487401 JPH1Q9HDC5 661 aaPredicted RBP14.23□□□□□ -0.13
SREBF1-215ENST00000487401 BARHL2Q9NY43 387 aa14.23□□□□□ -0.13
SREBF1-215ENST00000487401 INSL6Q9Y581 213 aa14.23□□□□□ -0.13
SREBF1-215ENST00000487401 CPA1P15085 419 aa14.22□□□□□ -0.13
SREBF1-215ENST00000487401 CDC27P30260 824 aa14.22□□□□□ -0.13
SREBF1-215ENST00000487401 ADD1P35611 737 aaKnown RBP14.22□□□□□ -0.13
SREBF1-215ENST00000487401 ADAM17P78536 824 aa14.22□□□□□ -0.13
SREBF1-215ENST00000487401 GRB10Q13322 594 aa14.22□□□□□ -0.13
SREBF1-215ENST00000487401 GRIK4Q16099 956 aa14.22□□□□□ -0.13
SREBF1-215ENST00000487401 CEP55Q53EZ4 464 aa14.22□□□□□ -0.13
SREBF1-215ENST00000487401 TYW1BQ6NUM6 668 aa14.22□□□□□ -0.13
SREBF1-215ENST00000487401 TAF2Q6P1X5 1199 aa14.22□□□□□ -0.13
SREBF1-215ENST00000487401 BLOC1S2Q6QNY1 142 aa14.22□□□□□ -0.13
SREBF1-215ENST00000487401 Q6ZUG5 572 aa14.22□□□□□ -0.13
SREBF1-215ENST00000487401 KCNB2Q92953 911 aa14.22□□□□□ -0.13
SREBF1-215ENST00000487401 TNPO1Q92973 898 aaKnown RBP14.22□□□□□ -0.13
SREBF1-215ENST00000487401 PGBD1Q96JS3 809 aa14.22□□□□□ -0.13
SREBF1-215ENST00000487401 TGS1Q96RS0 853 aaKnown RBP14.22□□□□□ -0.13
SREBF1-215ENST00000487401 ANO3Q9BYT9 981 aa14.22□□□□□ -0.13
SREBF1-215ENST00000487401 KCNH7Q9NS40 1196 aa14.22□□□□□ -0.13
SREBF1-215ENST00000487401 FAM217BQ9NTX9 383 aaPredicted RBP14.22□□□□□ -0.13
SREBF1-215ENST00000487401 SLC9A2Q9UBY0 812 aa14.22□□□□□ -0.13
SREBF1-215ENST00000487401 MTUS1Q9ULD2 1270 aa14.22□□□□□ -0.13
SREBF1-215ENST00000487401 LINC01553A4QN01 128 aa14.21□□□□□ -0.13
SREBF1-215ENST00000487401 RRN3P2A6NIE6 340 aa14.21□□□□□ -0.13
SREBF1-215ENST00000487401 REC8O95072 547 aa14.21□□□□□ -0.13
SREBF1-215ENST00000487401 PSMA5P28066 241 aa14.21□□□□□ -0.13
SREBF1-215ENST00000487401 ERVK-21P61565 698 aa14.21□□□□□ -0.13
SREBF1-215ENST00000487401 IGBP1P78318 339 aa14.21□□□□□ -0.13
SREBF1-215ENST00000487401 APOBRQ0VD83 1088 aa14.21□□□□□ -0.13
SREBF1-215ENST00000487401 AP3B2Q13367 1082 aa14.21□□□□□ -0.13
SREBF1-215ENST00000487401 AAK1Q2M2I8 961 aa14.21□□□□□ -0.13
SREBF1-215ENST00000487401 FAM26DQ5JW98 314 aa14.21□□□□□ -0.13
SREBF1-215ENST00000487401 RUFY4Q6ZNE9 571 aa14.21□□□□□ -0.13
SREBF1-215ENST00000487401 CYP2W1Q8TAV3 490 aa14.21□□□□□ -0.13
SREBF1-215ENST00000487401 APBB2Q92870 758 aa14.21□□□□□ -0.13
SREBF1-215ENST00000487401 BRF1Q92994 677 aa14.21□□□□□ -0.13
SREBF1-215ENST00000487401 TMEM260Q9NX78 707 aa14.21□□□□□ -0.13
SREBF1-215ENST00000487401 SNX14Q9Y5W7 946 aa14.21□□□□□ -0.13
SREBF1-215ENST00000487401 CUL9Q8IWT3 2517 aa14.21□□□□□ -0.13
SREBF1-215ENST00000487401 PRUNE2Q8WUY3 3088 aa14.2□□□□□ -0.14
SREBF1-215ENST00000487401 ARP10275 920 aa14.2□□□□□ -0.14
SREBF1-215ENST00000487401 SCG2P13521 617 aa14.2□□□□□ -0.14
SREBF1-215ENST00000487401 HSPA4P34932 840 aa14.2□□□□□ -0.14
SREBF1-215ENST00000487401 AKAP17AQ02040 695 aaKnown RBP14.2□□□□□ -0.14
SREBF1-215ENST00000487401 PFKFB3Q16875 520 aaPredicted RBP14.2□□□□□ -0.14
SREBF1-215ENST00000487401 JAKMIP3Q5VZ66 844 aa14.2□□□□□ -0.14
SREBF1-215ENST00000487401 KRT40Q6A162 431 aa14.2□□□□□ -0.14
SREBF1-215ENST00000487401 SPRED2Q7Z698 418 aa14.2□□□□□ -0.14
SREBF1-215ENST00000487401 RPAINQ86UA6 219 aa14.2□□□□□ -0.14
SREBF1-215ENST00000487401 CCDC12Q8WUD4 166 aaPredicted RBP14.2□□□□□ -0.14
SREBF1-215ENST00000487401 YME1L1Q96TA2 773 aa14.2□□□□□ -0.14
SREBF1-215ENST00000487401 IFIH1Q9BYX4 1025 aaKnown RBP14.2□□□□□ -0.14
SREBF1-215ENST00000487401 AGO4Q9HCK5 861 aaKnown RBP14.2□□□□□ -0.14
SREBF1-215ENST00000487401 TUBE1Q9UJT0 475 aa14.2□□□□□ -0.14
SREBF1-215ENST00000487401 TRPC6Q9Y210 931 aa14.2□□□□□ -0.14
SREBF1-215ENST00000487401 NFASCO94856 1347 aa14.19□□□□□ -0.14
SREBF1-215ENST00000487401 RBAK-RBAKDNI3L0D1 243 aa14.19□□□□□ -0.14
SREBF1-215ENST00000487401 TNFRSF10AO00220 468 aa14.19□□□□□ -0.14
SREBF1-215ENST00000487401 MEIS1O00470 390 aa14.19□□□□□ -0.14
SREBF1-215ENST00000487401 UPP2O95045 317 aa14.19□□□□□ -0.14
SREBF1-215ENST00000487401 CHRNA1P02708 482 aa14.19□□□□□ -0.14
SREBF1-215ENST00000487401 INSRRP14616 1297 aa14.19□□□□□ -0.14
SREBF1-215ENST00000487401 RPS6KB1P23443 525 aa14.19□□□□□ -0.14
SREBF1-215ENST00000487401 SREBF1P36956 1147 aa14.19□□□□□ -0.14
SREBF1-215ENST00000487401 ACTR2P61160 394 aa14.19□□□□□ -0.14
SREBF1-215ENST00000487401 MCTP2Q6DN12 878 aa14.19□□□□□ -0.14
SREBF1-215ENST00000487401 ADAMTS19Q8TE59 1207 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms