RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 H2AFB2P0C5Z0 115 aa7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 FAM153BP0C7A2 387 aa7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 ZNF865P0CJ78 1059 aaPredicted RBP7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 TCIRG1Q13488 830 aa7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 HABP4Q5JVS0 413 aaKnown RBP7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 KIF6Q6ZMV9 814 aa7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 C22orf34Q6ZV56 151 aa7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 ZNF34Q8IZ26 560 aa7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 MFSD4AQ8N468 514 aa7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 ZNF513Q8N8E2 541 aaPredicted RBP7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 BVESQ8NE79 360 aa7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 APPBP2Q92624 585 aa7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 FANCLQ9NW38 375 aa7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 NIP7Q9Y221 180 aaKnown RBP eCLIP7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 PTCH2Q9Y6C5 1203 aa7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 CAPN6Q9Y6Q1 641 aa7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 ZBED9Q6R2W3 1325 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 PI4KAP2A4QPH2 592 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 ENPP3O14638 875 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 ITGAVP06756 1048 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 ITIH2P19823 946 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 GPTP24298 496 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 FXR1P51114 621 aaKnown RBP eCLIP7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 TNK2Q07912 1038 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 FSTL1Q12841 308 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 NMIQ13287 307 aaPredicted RBP7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 SQSTM1Q13501 440 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 PPP2R5DQ14738 602 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 CLEC16AQ2KHT3 1053 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 SUSD4Q5VX71 490 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 GPAT2Q6NUI2 795 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 ZNF227Q86WZ6 799 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 FIBCD1Q8N539 461 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 PI4KAP1Q8N8J0 262 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 FAM181AQ8N9Y4 354 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 PLBD2Q8NHP8 589 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 SSH1Q8WYL5 1049 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 DSCC1Q9BVC3 393 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 STK31Q9BXU1 1019 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 CHMP4AQ9BY43 222 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 NOL6Q9H6R4 1146 aaKnown RBP7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 LRRC4CQ9HCJ2 640 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 FHOD1Q9Y613 1164 aa7.8□□□□□ -1.16
RTFDC1-209ENST00000487211 UBN2Q6ZU65 1347 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 MEIS1O00470 390 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 SIGLEC6O43699 453 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 ADCY3O60266 1144 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 CDC45O75419 566 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 CLSTN1O94985 981 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 PRAMEF1O95521 474 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 KCNA3P22001 575 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 HSD3B2P26439 372 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 OXCT1P55809 520 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 PPP2R2AP63151 447 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 EGFLAMQ63HQ2 1017 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 PRR5LQ6MZQ0 368 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 KSR2Q6VAB6 950 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 HOMER1Q86YM7 354 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 SYNE4Q8N205 404 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 CRACR2BQ8N4Y2 399 aaPredicted RBP7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 ZBTB38Q8NAP3 1195 aaPredicted RBP7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 PIWIL2Q8TC59 973 aaKnown RBP7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 SYTL5Q8TDW5 730 aaPredicted RBP7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 RCC1LQ96I51 464 aaKnown RBP7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 SPOCK3Q9BQ16 436 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 CHST7Q9NS84 486 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 TMEM260Q9NX78 707 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 PRR13Q9NZ81 148 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 CGGBP1Q9UFW8 167 aaPredicted RBP7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 MINPP1Q9UNW1 487 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 ZNF652Q9Y2D9 606 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 DIS3Q9Y2L1 958 aaKnown RBP7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 CD2APQ9Y5K6 639 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 U3KQE9 123 aa7.79□□□□□ -1.16
RTFDC1-209ENST00000487211 A0A0G2JLW4 131 aa7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 SHISA3A0PJX4 238 aa7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 MSTNO14793 375 aa7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 PROCP04070 461 aa7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 CTCFP49711 727 aaPredicted RBP7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 RARSP54136 660 aaKnown RBP7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 HSP90AA2PQ14568 343 aaPredicted RBP7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 RSPO4Q2I0M5 234 aaPredicted RBP7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 NKAPLQ5M9Q1 402 aa7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 CDKAL1Q5VV42 579 aa7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 POMZP3Q6PJE2 187 aa7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 NLRP10Q86W26 655 aa7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 ARHGEF39Q8N4T4 335 aa7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 ZSWIM2Q8NEG5 633 aa7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 YTHDC1Q96MU7 727 aaKnown RBP7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 ZDHHC15Q96MV8 337 aa7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 AARSD1Q9BTE6 412 aaKnown RBP7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 ISCA1Q9BUE6 129 aa7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 ARHGEF4Q9NR80 690 aa7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 MAP3K2Q9Y2U5 619 aa7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 EMC9Q9Y3B6 208 aa7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 C4AP0C0L4 1744 aa7.78□□□□□ -1.16
RTFDC1-209ENST00000487211 LAMB4A4D0S4 1761 aa7.77□□□□□ -1.17
RTFDC1-209ENST00000487211 TRAV20A0A0B4J274 112 aa7.77□□□□□ -1.17
RTFDC1-209ENST00000487211 TBX1O43435 398 aa7.77□□□□□ -1.17
RTFDC1-209ENST00000487211 BCAR3O75815 825 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms