RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 NUB1Q9Y5A7 615 aa6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 SPO11Q9Y5K1 396 aa6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 HYAL3O43820 417 aaPredicted RBP6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 ADAM23O75077 832 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 SDHBP21912 280 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 TUSC3Q13454 348 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 DDB1Q16531 1140 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 BROXQ5VW32 411 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 CYP4F22Q6NT55 531 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 MILR1Q7Z6M3 343 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 PASD1Q8IV76 773 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 DLG3Q92796 817 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 SCYL1Q96KG9 808 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 RNF32Q9H0A6 362 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 AP5M1Q9H0R1 490 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 PCIF1Q9H4Z3 704 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 CHPF2Q9P2E5 772 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 MYOTQ9UBF9 498 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 ASH2LQ9UBL3 628 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 PALD1Q9ULE6 856 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 ZNF652Q9Y2D9 606 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 PCDHB4Q9Y5E5 795 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 B3GALT1Q9Y5Z6 326 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 EID1Q9Y6B2 187 aa6.72□□□□□ -1.33
PRPF38A-203ENST00000487160 FAM90A27PA6NNH2 459 aa6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 F8W031 263 aaPredicted RBP6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 GABRDO14764 452 aa6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 SRGAP3O43295 1099 aa6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 PTX3P26022 381 aaPredicted RBP6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 EPHA5P54756 1037 aa6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 TMEM132BQ14DG7 1078 aa6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 ZMYM1Q5SVZ6 1142 aa6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 SYDE2Q5VT97 1194 aa6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 BTBD8Q5XKL5 378 aa6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 PAQR3Q6TCH7 311 aa6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 CLRN3Q8NCR9 226 aa6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 PHOSPHO1Q8TCT1 267 aa6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 YIPF4Q9BSR8 244 aa6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 TOMM22Q9NS69 142 aa6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 RIC8BQ9NVN3 520 aa6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 NUDT5Q9UKK9 219 aa6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 YBX2Q9Y2T7 364 aaKnown RBP6.71□□□□□ -1.34
PRPF38A-203ENST00000487160 BICRAQ9NZM4 1560 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 TCRBV5S2A0A599 114 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 NUDT19A8MXV4 375 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 CYBBP04839 570 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 PTPN1P18031 435 aaKnown RBP6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 LSP1P33241 339 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 AFMP43652 599 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 SESN3P58005 492 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 ERVFRD-1P60508 538 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 SMAD3P84022 425 aaKnown RBP6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 GRIN1Q05586 938 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 FAPQ12884 760 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 LRP8Q14114 963 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 TERF2Q15554 542 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 SMAD2Q15796 467 aaKnown RBP6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 FYB2Q5VWT5 728 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 CC2D1AQ6P1N0 951 aaPredicted RBP6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 ABI1Q8IZP0 508 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 ARRDC4Q8NCT1 418 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 PEX11GQ96HA9 241 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 AHCYL2Q96HN2 611 aaKnown RBP6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 MS4A5Q9H3V2 200 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 ACSS2Q9NR19 701 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 KCNH7Q9NS40 1196 aa6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 DBR1Q9UK59 544 aaKnown RBP6.7□□□□□ -1.34
PRPF38A-203ENST00000487160 BUB1BO60566 1050 aaPredicted RBP6.69□□□□□ -1.34
PRPF38A-203ENST00000487160 C4BPAP04003 597 aaKnown RBP6.69□□□□□ -1.34
PRPF38A-203ENST00000487160 MPOP05164 745 aa6.69□□□□□ -1.34
PRPF38A-203ENST00000487160 NEK2P51955 445 aa6.69□□□□□ -1.34
PRPF38A-203ENST00000487160 EPHB1P54762 984 aa6.69□□□□□ -1.34
PRPF38A-203ENST00000487160 ERVK-21P61565 698 aa6.69□□□□□ -1.34
PRPF38A-203ENST00000487160 MCL1Q07820 350 aa6.69□□□□□ -1.34
PRPF38A-203ENST00000487160 FMNL3Q8IVF7 1028 aa6.69□□□□□ -1.34
PRPF38A-203ENST00000487160 TRIM48Q8IWZ4 208 aa6.69□□□□□ -1.34
PRPF38A-203ENST00000487160 FLAD1Q8NFF5 587 aa6.69□□□□□ -1.34
PRPF38A-203ENST00000487160 KIRREL1Q96J84 757 aa6.69□□□□□ -1.34
PRPF38A-203ENST00000487160 MENTQ9BUN1 341 aa6.69□□□□□ -1.34
PRPF38A-203ENST00000487160 HCFC2Q9Y5Z7 792 aa6.69□□□□□ -1.34
PRPF38A-203ENST00000487160 TNKSO95271 1327 aa6.69□□□□□ -1.34
PRPF38A-203ENST00000487160 K7ESF4 209 aa6.68□□□□□ -1.34
PRPF38A-203ENST00000487160 ACOT7O00154 380 aa6.68□□□□□ -1.34
PRPF38A-203ENST00000487160 CYP17A1P05093 508 aa6.68□□□□□ -1.34
PRPF38A-203ENST00000487160 PHC1P78364 1004 aa6.68□□□□□ -1.34
PRPF38A-203ENST00000487160 PRR5P85299 388 aa6.68□□□□□ -1.34
PRPF38A-203ENST00000487160 NR1I3Q14994 352 aa6.68□□□□□ -1.34
PRPF38A-203ENST00000487160 ADGRF1Q5T601 910 aa6.68□□□□□ -1.34
PRPF38A-203ENST00000487160 ESRP1Q6NXG1 681 aaKnown RBP6.68□□□□□ -1.34
PRPF38A-203ENST00000487160 RPTNQ6XPR3 784 aa6.68□□□□□ -1.34
PRPF38A-203ENST00000487160 RASSF3Q86WH2 238 aa6.68□□□□□ -1.34
PRPF38A-203ENST00000487160 CBARPQ8N350 705 aaPredicted RBP6.68□□□□□ -1.34
PRPF38A-203ENST00000487160 ZNF610Q8N9Z0 462 aa6.68□□□□□ -1.34
PRPF38A-203ENST00000487160 PDGFDQ9GZP0 370 aaPredicted RBP6.68□□□□□ -1.34
PRPF38A-203ENST00000487160 ZMAT4Q9H898 229 aa6.68□□□□□ -1.34
PRPF38A-203ENST00000487160 C14orf119Q9NWQ9 140 aa6.68□□□□□ -1.34
PRPF38A-203ENST00000487160 TCEAL9Q9UHQ7 104 aa6.68□□□□□ -1.34
PRPF38A-203ENST00000487160 NOC2LQ9Y3T9 749 aaKnown RBP6.68□□□□□ -1.34
PRPF38A-203ENST00000487160 LCHNA4D1U4 455 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms