RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 ERAP1Q9NZ08 941 aa16.57■□□□□ 0.24
LIMS3-205ENST00000487150 NOD1Q9Y239 953 aa16.57■□□□□ 0.24
LIMS3-205ENST00000487150 WDR64B1ANS9 1081 aa16.56■□□□□ 0.24
LIMS3-205ENST00000487150 MARCH6O60337 910 aa16.56■□□□□ 0.24
LIMS3-205ENST00000487150 SORBS3O60504 671 aa16.56■□□□□ 0.24
LIMS3-205ENST00000487150 BAG4O95429 457 aaKnown RBP16.56■□□□□ 0.24
LIMS3-205ENST00000487150 TDP2O95551 362 aa16.56■□□□□ 0.24
LIMS3-205ENST00000487150 HSP90AA1P07900 732 aaKnown RBP16.56■□□□□ 0.24
LIMS3-205ENST00000487150 PDIA4P13667 645 aaKnown RBP16.56■□□□□ 0.24
LIMS3-205ENST00000487150 JAK3P52333 1124 aa16.56■□□□□ 0.24
LIMS3-205ENST00000487150 ACTR2P61160 394 aa16.56■□□□□ 0.24
LIMS3-205ENST00000487150 PSMC6P62333 389 aa16.56■□□□□ 0.24
LIMS3-205ENST00000487150 GUCY1B3Q02153 619 aa16.56■□□□□ 0.24
LIMS3-205ENST00000487150 ITGB3BPQ13352 177 aaPredicted RBP16.56■□□□□ 0.24
LIMS3-205ENST00000487150 KIAA0753Q2KHM9 967 aa16.56■□□□□ 0.24
LIMS3-205ENST00000487150 LRCH2Q5VUJ6 765 aa16.56■□□□□ 0.24
LIMS3-205ENST00000487150 FAM160B1Q5W0V3 765 aa16.56■□□□□ 0.24
LIMS3-205ENST00000487150 CCDC155Q8N6L0 562 aa16.56■□□□□ 0.24
LIMS3-205ENST00000487150 GLG1Q92896 1179 aa16.56■□□□□ 0.24
LIMS3-205ENST00000487150 C16orf70Q9BSU1 422 aa16.56■□□□□ 0.24
LIMS3-205ENST00000487150 PRDM5Q9NQX1 630 aaPredicted RBP16.56■□□□□ 0.24
LIMS3-205ENST00000487150 PDLIM7Q9NR12 457 aa16.56■□□□□ 0.24
LIMS3-205ENST00000487150 TMEM39AQ9NV64 488 aa16.56■□□□□ 0.24
LIMS3-205ENST00000487150 HAS3O00219 553 aa16.55■□□□□ 0.24
LIMS3-205ENST00000487150 MSH4O15457 936 aa16.55■□□□□ 0.24
LIMS3-205ENST00000487150 NEMFO60524 1076 aa16.55■□□□□ 0.24
LIMS3-205ENST00000487150 KAT2BQ92831 832 aa16.55■□□□□ 0.24
LIMS3-205ENST00000487150 SLC5A5Q92911 643 aa16.55■□□□□ 0.24
LIMS3-205ENST00000487150 GTF2IRD1Q9UHL9 959 aa16.55■□□□□ 0.24
LIMS3-205ENST00000487150 H0YGN5 161 aa16.54■□□□□ 0.24
LIMS3-205ENST00000487150 BACH1O14867 736 aa16.54■□□□□ 0.24
LIMS3-205ENST00000487150 KIAA0355O15063 1070 aa16.54■□□□□ 0.24
LIMS3-205ENST00000487150 LGR5O75473 907 aa16.54■□□□□ 0.24
LIMS3-205ENST00000487150 RPLP2P05387 115 aaKnown RBP16.54■□□□□ 0.24
LIMS3-205ENST00000487150 PSAPP07602 524 aa16.54■□□□□ 0.24
LIMS3-205ENST00000487150 U2AF2P26368 475 aaKnown RBP eCLIP16.54■□□□□ 0.24
LIMS3-205ENST00000487150 CHMP4BP1P59074 171 aa16.54■□□□□ 0.24
LIMS3-205ENST00000487150 UTP14CQ5TAP6 766 aaKnown RBP16.54■□□□□ 0.24
LIMS3-205ENST00000487150 LARP1BQ659C4 914 aaKnown RBP16.54■□□□□ 0.24
LIMS3-205ENST00000487150 PLPPR4Q7Z2D5 763 aa16.54■□□□□ 0.24
LIMS3-205ENST00000487150 ETNPPLQ8TBG4 499 aa16.54■□□□□ 0.24
LIMS3-205ENST00000487150 KCNMB3Q9NPA1 279 aa16.54■□□□□ 0.24
LIMS3-205ENST00000487150 SAMM50Q9Y512 469 aa16.54■□□□□ 0.24
LIMS3-205ENST00000487150 PCDHA10Q9Y5I2 948 aa16.54■□□□□ 0.24
LIMS3-205ENST00000487150 GRIN2DO15399 1336 aa16.53■□□□□ 0.24
LIMS3-205ENST00000487150 NRCAMQ92823 1304 aa16.53■□□□□ 0.24
LIMS3-205ENST00000487150 DDX39AO00148 427 aaKnown RBP16.53■□□□□ 0.24
LIMS3-205ENST00000487150 DHX15O43143 795 aaKnown RBP16.53■□□□□ 0.24
LIMS3-205ENST00000487150 B4GALT4O60513 344 aa16.53■□□□□ 0.24
LIMS3-205ENST00000487150 DTNBO60941 627 aa16.53■□□□□ 0.24
LIMS3-205ENST00000487150 ATG7O95352 703 aa16.53■□□□□ 0.24
LIMS3-205ENST00000487150 CD4P01730 458 aa16.53■□□□□ 0.24
LIMS3-205ENST00000487150 RAG1P15918 1043 aa16.53■□□□□ 0.24
LIMS3-205ENST00000487150 STAT5BP51692 787 aa16.53■□□□□ 0.24
LIMS3-205ENST00000487150 FAAP100Q0VG06 881 aa16.53■□□□□ 0.24
LIMS3-205ENST00000487150 BFSP2Q13515 415 aa16.53■□□□□ 0.24
LIMS3-205ENST00000487150 MCTP1Q6DN14 999 aa16.53■□□□□ 0.24
LIMS3-205ENST00000487150 CAGE1Q8TC20 777 aa16.53■□□□□ 0.24
LIMS3-205ENST00000487150 AFAP1L1Q8TED9 768 aa16.53■□□□□ 0.24
LIMS3-205ENST00000487150 FAM167AQ96KS9 214 aa16.53■□□□□ 0.24
LIMS3-205ENST00000487150 TBX21Q9UL17 535 aa16.53■□□□□ 0.24
LIMS3-205ENST00000487150 ZMYND8Q9ULU4 1186 aaPredicted RBP16.53■□□□□ 0.24
LIMS3-205ENST00000487150 GSTTP1A0A1W2PQM5 241 aa16.52■□□□□ 0.24
LIMS3-205ENST00000487150 C17orf102A2RUQ5 167 aa16.52■□□□□ 0.24
LIMS3-205ENST00000487150 SLC37A4O43826 429 aa16.52■□□□□ 0.24
LIMS3-205ENST00000487150 DKC1O60832 514 aaKnown RBP eCLIP16.52■□□□□ 0.24
LIMS3-205ENST00000487150 PSMD10O75832 226 aa16.52■□□□□ 0.24
LIMS3-205ENST00000487150 CALCRLQ16602 461 aa16.52■□□□□ 0.24
LIMS3-205ENST00000487150 PTGISQ16647 500 aa16.52■□□□□ 0.24
LIMS3-205ENST00000487150 RILPL1Q5EBL4 403 aa16.52■□□□□ 0.24
LIMS3-205ENST00000487150 TRIM50Q86XT4 487 aa16.52■□□□□ 0.24
LIMS3-205ENST00000487150 ATP6V0A1Q93050 837 aa16.52■□□□□ 0.24
LIMS3-205ENST00000487150 HIPK3Q9H422 1215 aa16.52■□□□□ 0.24
LIMS3-205ENST00000487150 SCN10AQ9Y5Y9 1956 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 PDE4DIPQ5VU43 2346 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 IGKV6D-21A0A0A0MT36 114 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 RRN3P2A6NIE6 340 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 PITPNM1O00562 1244 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 CAND2O75155 1236 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 PARNO95453 639 aaKnown RBP16.51■□□□□ 0.23
LIMS3-205ENST00000487150 CCNE2O96020 404 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 SMIM10L2AP0DMW4 78 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 SMIM10L2BP0DMW5 78 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 PPP2R5CQ13362 524 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 EARS2Q5JPH6 523 aaKnown RBP16.51■□□□□ 0.23
LIMS3-205ENST00000487150 PDXDC2PQ6P474 469 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 ABHD15Q6UXT9 468 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 BRAPQ7Z569 592 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 TMEM199Q8N511 208 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 BCAS3Q9H6U6 928 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 ZNF302Q9NR11 478 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 DISC1Q9NRI5 854 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 HDAC6Q9UBN7 1215 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 TRPC6Q9Y210 931 aa16.51■□□□□ 0.23
LIMS3-205ENST00000487150 LAD1O00515 517 aa16.5■□□□□ 0.23
LIMS3-205ENST00000487150 EDIL3O43854 480 aa16.5■□□□□ 0.23
LIMS3-205ENST00000487150 TIMP1P01033 207 aa16.5■□□□□ 0.23
LIMS3-205ENST00000487150 SYN1P17600 705 aa16.5■□□□□ 0.23
LIMS3-205ENST00000487150 HOXC8P31273 242 aa16.5■□□□□ 0.23
LIMS3-205ENST00000487150 PPFIA1Q13136 1202 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms