RNA–Protein interactions for RNA: ENST00000487109.5

ABCA2-218, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,031 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-218ENST00000487109 C17orf53Q8N3J3 647 aaPredicted RBP13.32□□□□□ -0.28
ABCA2-218ENST00000487109 ZRANB2O95218 330 aaKnown RBP eCLIP13.31□□□□□ -0.285e-6■■■■□ 23.5
ABCA2-218ENST00000487109 OR52Z1P0C646 297 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 KCTD16Q68DU8 428 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 PATL1Q86TB9 770 aaKnown RBP13.31□□□□□ -0.28
ABCA2-218ENST00000487109 RNF123Q5XPI4 1314 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 USP17L12C9JPN9 530 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 USP17L21D6R901 530 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 HNRNPDLO14979 420 aaKnown RBP13.31□□□□□ -0.28
ABCA2-218ENST00000487109 BNIP3LO60238 219 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 ANP32DO95626 131 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 BASP1P80723 227 aaKnown RBP13.31□□□□□ -0.28
ABCA2-218ENST00000487109 ZKSCAN8Q15776 578 aaPredicted RBP13.31□□□□□ -0.28
ABCA2-218ENST00000487109 KHDRBS2Q5VWX1 349 aaKnown RBP13.31□□□□□ -0.28
ABCA2-218ENST00000487109 MIS18BP1Q6P0N0 1132 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 PLA2G4DQ86XP0 818 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 NOSTRINQ8IVI9 506 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 TEKT4Q8WW24 435 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 ING2Q9H160 280 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 STX18Q9P2W9 335 aaKnown RBP13.31□□□□□ -0.28
ABCA2-218ENST00000487109 ABCC4O15439 1325 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 LOC102724428A0A0B4J2F2 783 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 HSPD1P10809 573 aaKnown RBP13.31□□□□□ -0.28
ABCA2-218ENST00000487109 TAC1P20366 129 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 SIK1P57059 783 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 KRT27Q7Z3Y8 459 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 PNMA1Q8ND90 353 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 DESI2Q9BSY9 194 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 TRAPPC10P48553 1259 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 ARL13BQ3SXY8 428 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 TCP11Q8WWU5 503 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 NAF1Q96HR8 494 aaKnown RBP13.31□□□□□ -0.28
ABCA2-218ENST00000487109 NT5C1BQ96P26 610 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 L3MBTL1Q9Y468 752 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 RPN1P04843 607 aaKnown RBP13.31□□□□□ -0.28
ABCA2-218ENST00000487109 GRIN1Q05586 938 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 EHHADHQ08426 723 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 MYO1EQ12965 1108 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 ARHGAP27Q6ZUM4 889 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 TRIML2Q8N7C3 387 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 C7orf31Q8N865 590 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 EXT2Q93063 718 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 ATG3Q9NT62 314 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 NFKBIL1Q9UBC1 381 aaPredicted RBP13.31□□□□□ -0.28
ABCA2-218ENST00000487109 MT-ND3P03897 115 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 SCG2P13521 617 aa13.31□□□□□ -0.28
ABCA2-218ENST00000487109 NSUN2Q08J23 767 aaKnown RBP eCLIP13.31□□□□□ -0.28
ABCA2-218ENST00000487109 CREB3O43889 395 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 SKIP12755 728 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 EFCAB8A8MWE9 144 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 H2AFZP0C0S5 128 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 CCT5P48643 541 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 H2AFVQ71UI9 128 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 ST13P4Q8IZP2 240 aaPredicted RBP13.3□□□□□ -0.28
ABCA2-218ENST00000487109 SUN2Q9UH99 717 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 MID2Q9UJV3 735 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 JRKLQ9Y4A0 524 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 M0R2C6 588 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 SNX2O60749 519 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 POLE2P56282 527 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 SLC39A2Q9NP94 309 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 TBK1Q9UHD2 729 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 BTDP43251 543 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 KCTD2Q14681 263 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 CYP4F22Q6NT55 531 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 ENOX1Q8TC92 643 aaKnown RBP13.3□□□□□ -0.28
ABCA2-218ENST00000487109 CALN1Q9BXU9 219 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 PNMA6EA0A0J9YXQ4 647 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 KRT87PA6NCN2 255 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 TCP10L2B9ZVM9 353 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 SRGAP2CP0DJJ0 459 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 TAGAPQ8N103 731 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 LRRC47Q8N1G4 583 aaKnown RBP13.3□□□□□ -0.28
ABCA2-218ENST00000487109 AK8Q96MA6 479 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 CDC42BPGQ6DT37 1551 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 GCFC2P16383 781 aaKnown RBP13.3□□□□□ -0.28
ABCA2-218ENST00000487109 TCP11X2Q5H9J9 407 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 PALMDQ9NP74 551 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 KLRF2D3W0D1 207 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 PYGBP11216 843 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 ELMOD1Q8N336 334 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 FANCBQ8NB91 859 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 DHX36Q9H2U1 1008 aaKnown RBP13.3□□□□□ -0.28
ABCA2-218ENST00000487109 SLITRK6Q9H5Y7 841 aa13.3□□□□□ -0.28
ABCA2-218ENST00000487109 KRT1P04264 644 aa13.29□□□□□ -0.28
ABCA2-218ENST00000487109 AMNQ9BXJ7 453 aa13.29□□□□□ -0.28
ABCA2-218ENST00000487109 PLS3P13797 630 aa13.29□□□□□ -0.28
ABCA2-218ENST00000487109 ADCY1Q08828 1119 aa13.29□□□□□ -0.28
ABCA2-218ENST00000487109 FAM133BQ5BKY9 247 aaKnown RBP13.29□□□□□ -0.28
ABCA2-218ENST00000487109 SIX6OS1Q8N1H7 587 aa13.29□□□□□ -0.28
ABCA2-218ENST00000487109 STK17AQ9UEE5 414 aa13.29□□□□□ -0.28
ABCA2-218ENST00000487109 INPP5FQ9Y2H2 1132 aa13.29□□□□□ -0.28
ABCA2-218ENST00000487109 WDR91A4D1P6 747 aa13.29□□□□□ -0.28
ABCA2-218ENST00000487109 GAP43P17677 238 aa13.29□□□□□ -0.28
ABCA2-218ENST00000487109 CHRNDQ07001 517 aa13.29□□□□□ -0.28
ABCA2-218ENST00000487109 ZFYVE19Q96K21 471 aa13.29□□□□□ -0.28
ABCA2-218ENST00000487109 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.29□□□□□ -0.28
ABCA2-218ENST00000487109 INO80B-WBP1J3KQ70 363 aa13.29□□□□□ -0.28
ABCA2-218ENST00000487109 INO80BQ9C086 356 aaPredicted RBP13.29□□□□□ -0.28
ABCA2-218ENST00000487109 MRPL47Q9HD33 250 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms