RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 NAPAP54920 295 aa28.14■■■□□ 2.1
LIME1-206ENST00000487026 MTMR1Q13613 665 aa28.14■■■□□ 2.1
LIME1-206ENST00000487026 ATXN2LQ8WWM7 1075 aaKnown RBP28.14■■■□□ 2.1
LIME1-206ENST00000487026 CDHR1Q96JP9 859 aa28.14■■■□□ 2.1
LIME1-206ENST00000487026 PGBD1Q96JS3 809 aa28.14■■■□□ 2.1
LIME1-206ENST00000487026 NAP1L2Q9ULW6 460 aaPredicted RBP28.14■■■□□ 2.1
LIME1-206ENST00000487026 TTC28Q96AY4 2481 aa28.14■■■□□ 2.09
LIME1-206ENST00000487026 REV3LO60673 3130 aa28.14■■■□□ 2.09
LIME1-206ENST00000487026 GOLGA8AA7E2F4 631 aa28.13■■■□□ 2.09
LIME1-206ENST00000487026 GOLGA8BA8MQT2 603 aa28.13■■■□□ 2.09
LIME1-206ENST00000487026 EFCAB14O75071 495 aa28.13■■■□□ 2.09
LIME1-206ENST00000487026 CDC27P30260 824 aa28.13■■■□□ 2.09
LIME1-206ENST00000487026 KRT32Q14532 448 aa28.13■■■□□ 2.09
LIME1-206ENST00000487026 LMBR1Q8WVP7 490 aa28.13■■■□□ 2.09
LIME1-206ENST00000487026 RAD9AQ99638 391 aa28.13■■■□□ 2.09
LIME1-206ENST00000487026 JADE2Q9NQC1 790 aa28.13■■■□□ 2.09
LIME1-206ENST00000487026 FAM217BQ9NTX9 383 aaPredicted RBP28.13■■■□□ 2.09
LIME1-206ENST00000487026 PRRC2BQ5JSZ5 2229 aaKnown RBP28.12■■■□□ 2.09
LIME1-206ENST00000487026 GTPBP6O43824 516 aaPredicted RBP28.12■■■□□ 2.09
LIME1-206ENST00000487026 ADAM17P78536 824 aa28.12■■■□□ 2.09
LIME1-206ENST00000487026 PLEKHG4Q58EX7 1191 aa28.12■■■□□ 2.09
LIME1-206ENST00000487026 CYP2W1Q8TAV3 490 aa28.12■■■□□ 2.09
LIME1-206ENST00000487026 SEPT1Q8WYJ6 367 aa28.12■■■□□ 2.09
LIME1-206ENST00000487026 ASB2Q96Q27 587 aa28.12■■■□□ 2.09
LIME1-206ENST00000487026 RIC8AQ9NPQ8 531 aa28.12■■■□□ 2.09
LIME1-206ENST00000487026 POU3F3P20264 500 aaPredicted RBP28.11■■■□□ 2.09
LIME1-206ENST00000487026 MARK3P27448 753 aa28.11■■■□□ 2.09
LIME1-206ENST00000487026 GRB10Q13322 594 aa28.11■■■□□ 2.09
LIME1-206ENST00000487026 MTUS1Q9ULD2 1270 aa28.11■■■□□ 2.09
LIME1-206ENST00000487026 STXBP3O00186 592 aa28.1■■■□□ 2.09
LIME1-206ENST00000487026 MRPS5P82675 430 aaKnown RBP28.1■■■□□ 2.09
LIME1-206ENST00000487026 FGD1P98174 961 aa28.1■■■□□ 2.09
LIME1-206ENST00000487026 SKIV2LQ15477 1246 aaKnown RBP28.1■■■□□ 2.09
LIME1-206ENST00000487026 CCDC136Q96JN2 1154 aa28.1■■■□□ 2.09
LIME1-206ENST00000487026 MXRA8Q9BRK3 442 aa28.1■■■□□ 2.09
LIME1-206ENST00000487026 EHMT1Q9H9B1 1298 aa28.1■■■□□ 2.09
LIME1-206ENST00000487026 TMEM260Q9NX78 707 aa28.1■■■□□ 2.09
LIME1-206ENST00000487026 SMCO2A6NFE2 343 aa28.09■■■□□ 2.09
LIME1-206ENST00000487026 ADD1P35611 737 aaKnown RBP28.09■■■□□ 2.09
LIME1-206ENST00000487026 ADCY7P51828 1080 aa28.09■■■□□ 2.09
LIME1-206ENST00000487026 APOBRQ0VD83 1088 aa28.09■■■□□ 2.09
LIME1-206ENST00000487026 MKRN4PQ13434 485 aaPredicted RBP28.09■■■□□ 2.09
LIME1-206ENST00000487026 RUFY4Q6ZNE9 571 aa28.09■■■□□ 2.09
LIME1-206ENST00000487026 MYOCDQ8IZQ8 938 aa28.09■■■□□ 2.09
LIME1-206ENST00000487026 GLG1Q92896 1179 aa28.09■■■□□ 2.09
LIME1-206ENST00000487026 TSPYL2Q9H2G4 693 aaPredicted RBP28.09■■■□□ 2.09
LIME1-206ENST00000487026 KCNH7Q9NS40 1196 aa28.09■■■□□ 2.09
LIME1-206ENST00000487026 NRCAMQ92823 1304 aa28.09■■■□□ 2.09
LIME1-206ENST00000487026 LINC01553A4QN01 128 aa28.08■■■□□ 2.09
LIME1-206ENST00000487026 MAFGO15525 162 aa28.08■■■□□ 2.09
LIME1-206ENST00000487026 LPXNO60711 386 aa28.08■■■□□ 2.09
LIME1-206ENST00000487026 CAND2O75155 1236 aa28.08■■■□□ 2.09
LIME1-206ENST00000487026 AMHP03971 560 aa28.08■■■□□ 2.09
LIME1-206ENST00000487026 HMGB1P09429 215 aaKnown RBP28.08■■■□□ 2.09
LIME1-206ENST00000487026 PPFIA1Q13136 1202 aa28.08■■■□□ 2.09
LIME1-206ENST00000487026 PPP1R18Q6NYC8 613 aa28.08■■■□□ 2.09
LIME1-206ENST00000487026 Q6ZUG5 572 aa28.08■■■□□ 2.09
LIME1-206ENST00000487026 SEPT8Q92599 483 aa28.08■■■□□ 2.09
LIME1-206ENST00000487026 JAKMIP1Q96N16 626 aaKnown RBP28.08■■■□□ 2.09
LIME1-206ENST00000487026 BARHL2Q9NY43 387 aa28.08■■■□□ 2.09
LIME1-206ENST00000487026 ARP10275 920 aa28.07■■■□□ 2.08
LIME1-206ENST00000487026 TFF2Q03403 129 aa28.07■■■□□ 2.08
LIME1-206ENST00000487026 GDPD5Q8WTR4 605 aa28.07■■■□□ 2.08
LIME1-206ENST00000487026 KCNB2Q92953 911 aa28.07■■■□□ 2.08
LIME1-206ENST00000487026 ANO3Q9BYT9 981 aa28.07■■■□□ 2.08
LIME1-206ENST00000487026 ERAP1Q9NZ08 941 aa28.07■■■□□ 2.08
LIME1-206ENST00000487026 SNX14Q9Y5W7 946 aa28.07■■■□□ 2.08
LIME1-206ENST00000487026 GRIK4Q16099 956 aa28.06■■■□□ 2.08
LIME1-206ENST00000487026 TGS1Q96RS0 853 aaKnown RBP28.06■■■□□ 2.08
LIME1-206ENST00000487026 PCYT2Q99447 389 aa28.06■■■□□ 2.08
LIME1-206ENST00000487026 SMARCAD1Q9H4L7 1026 aa28.06■■■□□ 2.08
LIME1-206ENST00000487026 JPH1Q9HDC5 661 aaPredicted RBP28.06■■■□□ 2.08
LIME1-206ENST00000487026 SLC9A2Q9UBY0 812 aa28.06■■■□□ 2.08
LIME1-206ENST00000487026 UPP2O95045 317 aa28.05■■■□□ 2.08
LIME1-206ENST00000487026 FOSP01100 380 aaPredicted RBP28.05■■■□□ 2.08
LIME1-206ENST00000487026 CHRNA1P02708 482 aa28.05■■■□□ 2.08
LIME1-206ENST00000487026 HSPA4P34932 840 aa28.05■■■□□ 2.08
LIME1-206ENST00000487026 METAP2P50579 478 aaKnown RBP eCLIP28.05■■■□□ 2.08
LIME1-206ENST00000487026 IGBP1P78318 339 aa28.05■■■□□ 2.08
LIME1-206ENST00000487026 FAM26DQ5JW98 314 aa28.05■■■□□ 2.08
LIME1-206ENST00000487026 KAT6AQ92794 2004 aa28.05■■■□□ 2.08
LIME1-206ENST00000487026 BRF1Q92994 677 aa28.05■■■□□ 2.08
LIME1-206ENST00000487026 ZBTB10Q96DT7 871 aa28.05■■■□□ 2.08
LIME1-206ENST00000487026 SUGCTQ9HAC7 445 aa28.05■■■□□ 2.08
LIME1-206ENST00000487026 INSL6Q9Y581 213 aa28.05■■■□□ 2.08
LIME1-206ENST00000487026 XIRP2A4UGR9 3374 aa28.05■■■□□ 2.08
LIME1-206ENST00000487026 hCG_1984214I3L0E3 225 aa28.04■■■□□ 2.08
LIME1-206ENST00000487026 ERVK-21P61565 698 aa28.04■■■□□ 2.08
LIME1-206ENST00000487026 CEP55Q53EZ4 464 aa28.04■■■□□ 2.08
LIME1-206ENST00000487026 MARCH8Q5T0T0 291 aa28.04■■■□□ 2.08
LIME1-206ENST00000487026 ZNF713Q8N859 430 aaPredicted RBP28.04■■■□□ 2.08
LIME1-206ENST00000487026 MICAL3Q7RTP6 2002 aa28.04■■■□□ 2.08
LIME1-206ENST00000487026 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.03■■■□□ 2.08
LIME1-206ENST00000487026 ADAMTS3O15072 1205 aa28.03■■■□□ 2.08
LIME1-206ENST00000487026 CLK2P49760 499 aaKnown RBP28.03■■■□□ 2.08
LIME1-206ENST00000487026 RCAN1P53805 252 aa28.03■■■□□ 2.08
LIME1-206ENST00000487026 ITGB3BPQ13352 177 aaPredicted RBP28.03■■■□□ 2.08
LIME1-206ENST00000487026 JAKMIP3Q5VZ66 844 aa28.03■■■□□ 2.08
LIME1-206ENST00000487026 BLOC1S2Q6QNY1 142 aa28.03■■■□□ 2.08
LIME1-206ENST00000487026 ADAMTS19Q8TE59 1207 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms