RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 VWA3BQ502W6 1294 aa6.74□□□□□ -1.33
COPS3-209ENST00000486810 DNTTIP2Q5QJE6 756 aaKnown RBP6.74□□□□□ -1.33
COPS3-209ENST00000486810 CIAPIN1Q6FI81 312 aa6.74□□□□□ -1.33
COPS3-209ENST00000486810 SPOCD1Q6ZMY3 1216 aa6.74□□□□□ -1.33
COPS3-209ENST00000486810 BRAPQ7Z569 592 aa6.74□□□□□ -1.33
COPS3-209ENST00000486810 TP53I13Q8NBR0 393 aaPredicted RBP6.74□□□□□ -1.33
COPS3-209ENST00000486810 UHMK1Q8TAS1 419 aaKnown RBP6.74□□□□□ -1.33
COPS3-209ENST00000486810 FNIP1Q8TF40 1166 aa6.74□□□□□ -1.33
COPS3-209ENST00000486810 DDX11Q96FC9 970 aa6.74□□□□□ -1.33
COPS3-209ENST00000486810 PWWP2AQ96N64 755 aa6.74□□□□□ -1.33
COPS3-209ENST00000486810 GORASP1Q9BQQ3 440 aa6.74□□□□□ -1.33
COPS3-209ENST00000486810 ALG1Q9BT22 464 aa6.74□□□□□ -1.33
COPS3-209ENST00000486810 MRPL4Q9BYD3 311 aaKnown RBP6.74□□□□□ -1.33
COPS3-209ENST00000486810 CBLCQ9ULV8 474 aa6.74□□□□□ -1.33
COPS3-209ENST00000486810 RAPGEF3O95398 923 aa6.73□□□□□ -1.33
COPS3-209ENST00000486810 LRG1P02750 347 aa6.73□□□□□ -1.33
COPS3-209ENST00000486810 AMY2AP04746 511 aa6.73□□□□□ -1.33
COPS3-209ENST00000486810 PYGMP11217 842 aa6.73□□□□□ -1.33
COPS3-209ENST00000486810 GNAT1P11488 350 aa6.73□□□□□ -1.33
COPS3-209ENST00000486810 AMY2BP19961 511 aa6.73□□□□□ -1.33
COPS3-209ENST00000486810 SPTY2D1Q68D10 685 aaPredicted RBP6.73□□□□□ -1.33
COPS3-209ENST00000486810 CYP4F22Q6NT55 531 aa6.73□□□□□ -1.33
COPS3-209ENST00000486810 ABHD17CQ6PCB6 329 aa6.73□□□□□ -1.33
COPS3-209ENST00000486810 RINLQ6ZS11 566 aa6.73□□□□□ -1.33
COPS3-209ENST00000486810 TERF2IPQ9NYB0 399 aa6.73□□□□□ -1.33
COPS3-209ENST00000486810 DTLQ9NZJ0 730 aa6.73□□□□□ -1.33
COPS3-209ENST00000486810 SFMBT1Q9UHJ3 866 aa6.73□□□□□ -1.33
COPS3-209ENST00000486810 ADAMTS20P59510 1910 aa6.73□□□□□ -1.33
COPS3-209ENST00000486810 VGLL3A8MV65 326 aa6.72□□□□□ -1.33
COPS3-209ENST00000486810 RFXAPO00287 272 aa6.72□□□□□ -1.33
COPS3-209ENST00000486810 FFAR3O14843 346 aa6.72□□□□□ -1.33
COPS3-209ENST00000486810 PLD2O14939 933 aa6.72□□□□□ -1.33
COPS3-209ENST00000486810 SRGAP2CP0DJJ0 459 aa6.72□□□□□ -1.33
COPS3-209ENST00000486810 ZSCAN22P10073 491 aaPredicted RBP6.72□□□□□ -1.33
COPS3-209ENST00000486810 AFF3P51826 1226 aaKnown RBP6.72□□□□□ -1.33
COPS3-209ENST00000486810 FZD5Q13467 585 aa6.72□□□□□ -1.33
COPS3-209ENST00000486810 FAM50AQ14320 339 aaKnown RBP6.72□□□□□ -1.33
COPS3-209ENST00000486810 ZKSCAN8Q15776 578 aaPredicted RBP6.72□□□□□ -1.33
COPS3-209ENST00000486810 CD300LDQ6UXZ3 194 aa6.72□□□□□ -1.33
COPS3-209ENST00000486810 PROSER1Q86XN7 944 aa6.72□□□□□ -1.33
COPS3-209ENST00000486810 LINC00482Q8N8I6 264 aa6.72□□□□□ -1.33
COPS3-209ENST00000486810 PHOSPHO1Q8TCT1 267 aa6.72□□□□□ -1.33
COPS3-209ENST00000486810 PDGFDQ9GZP0 370 aaPredicted RBP6.72□□□□□ -1.33
COPS3-209ENST00000486810 SPATA6Q9NWH7 488 aaPredicted RBP6.72□□□□□ -1.33
COPS3-209ENST00000486810 RBPJLQ9UBG7 517 aa6.72□□□□□ -1.33
COPS3-209ENST00000486810 FAN1Q9Y2M0 1017 aa6.72□□□□□ -1.33
COPS3-209ENST00000486810 MRPL42Q9Y6G3 142 aaKnown RBP6.72□□□□□ -1.33
COPS3-209ENST00000486810 TCRBV16S1A1N1A0A5B0 115 aa6.71□□□□□ -1.34
COPS3-209ENST00000486810 KRIT1O00522 736 aa6.71□□□□□ -1.34
COPS3-209ENST00000486810 EFCAB14O75071 495 aa6.71□□□□□ -1.34
COPS3-209ENST00000486810 SSR1P43307 286 aaKnown RBP6.71□□□□□ -1.34
COPS3-209ENST00000486810 CAP1Q01518 475 aa6.71□□□□□ -1.34
COPS3-209ENST00000486810 MAP2K1Q02750 393 aaPredicted RBP6.71□□□□□ -1.34
COPS3-209ENST00000486810 GRIN1Q05586 938 aa6.71□□□□□ -1.34
COPS3-209ENST00000486810 SPIRE1Q08AE8 756 aa6.71□□□□□ -1.34
COPS3-209ENST00000486810 TUSC3Q13454 348 aa6.71□□□□□ -1.34
COPS3-209ENST00000486810 TEPPQ6URK8 271 aa6.71□□□□□ -1.34
COPS3-209ENST00000486810 STK32CQ86UX6 486 aa6.71□□□□□ -1.34
COPS3-209ENST00000486810 ADGRG2Q8IZP9 1017 aa6.71□□□□□ -1.34
COPS3-209ENST00000486810 ZSCAN18Q8TBC5 510 aaPredicted RBP6.71□□□□□ -1.34
COPS3-209ENST00000486810 FBXW5Q969U6 566 aa6.71□□□□□ -1.34
COPS3-209ENST00000486810 KRTAP9-9Q9BYP9 154 aa6.71□□□□□ -1.34
COPS3-209ENST00000486810 KRTAP9-4Q9BYQ2 154 aa6.71□□□□□ -1.34
COPS3-209ENST00000486810 CD244Q9BZW8 370 aa6.71□□□□□ -1.34
COPS3-209ENST00000486810 RBM28Q9NW13 759 aaKnown RBP6.71□□□□□ -1.34
COPS3-209ENST00000486810 PMF1-BGLAPU3KQ54 211 aa6.71□□□□□ -1.34
COPS3-209ENST00000486810 A0A1B0GTL3 188 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 DNAJC8O75937 253 aaPredicted RBP6.7□□□□□ -1.34
COPS3-209ENST00000486810 ASMTLO95671 621 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 CYP2C8P10632 490 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 PDE6AP16499 860 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 CALRP27797 417 aaKnown RBP6.7□□□□□ -1.34
COPS3-209ENST00000486810 EPHA5P54756 1037 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 JAM2P57087 298 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 SATB1Q01826 763 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 MYBPC2Q14324 1141 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 TKFCQ3LXA3 575 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 FNDC3BQ53EP0 1204 aaKnown RBP6.7□□□□□ -1.34
COPS3-209ENST00000486810 FSTL4Q6MZW2 842 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 C16orf59Q7L2K0 433 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 SAPCD2Q86UD0 394 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 OSTM1Q86WC4 334 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 NBPF5PQ86XG9 351 aaPredicted RBP6.7□□□□□ -1.34
COPS3-209ENST00000486810 TTLL11Q8NHH1 800 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 TOE1Q96GM8 510 aaKnown RBP6.7□□□□□ -1.34
COPS3-209ENST00000486810 TSPAN18Q96SJ8 248 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 C11orf84Q9BUA3 381 aaPredicted RBP6.7□□□□□ -1.34
COPS3-209ENST00000486810 SMURF1Q9HCE7 757 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 RRAGDQ9NQL2 400 aaPredicted RBP6.7□□□□□ -1.34
COPS3-209ENST00000486810 DSEQ9UL01 958 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 COQ6Q9Y2Z9 468 aa6.7□□□□□ -1.34
COPS3-209ENST00000486810 LOC102724159A0A0B4J2E5 919 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 CCDC66A2RUB6 948 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 ZNF561-AS1K7EIQ3 104 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 ACOT7O00154 380 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 MAN2B1O00754 1011 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 TRIM13O60858 407 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 SDSP20132 328 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 THBS2P35442 1172 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 ITGA1P56199 1179 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms