RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 PECAM1P16284 738 aaPredicted RBP11.64□□□□□ -0.55
CCDC171-208ENST00000486641 PPP1R2P41236 205 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 ABL2P42684 1182 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 RWDD2BP57060 319 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 TRIM28Q13263 835 aaKnown RBP11.64□□□□□ -0.55
CCDC171-208ENST00000486641 BLMHQ13867 455 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 SLC18A3Q16572 532 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 CNNM4Q6P4Q7 775 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 TOM1L2Q6ZVM7 507 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 CABP7Q86V35 215 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 ERICH1Q86X53 443 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 PBKQ96KB5 322 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 SELENOSQ9BQE4 189 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 EDEM3Q9BZQ6 932 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 ADAM7Q9H2U9 754 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 LUC7LQ9NQ29 371 aaKnown RBP11.64□□□□□ -0.55
CCDC171-208ENST00000486641 ADAMTS1Q9UHI8 967 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 ANAPC4Q9UJX5 808 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 ATP8A1Q9Y2Q0 1164 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 FLT1P17948 1338 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 A6NHS1 94 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 TTI1O43156 1089 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 DDAH1O94760 285 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 SHBGP04278 402 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 FGFR2P21802 821 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 NCALDP61601 193 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 ARID5AQ03989 594 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 SNX1Q13596 522 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 ENOX2Q16206 610 aaKnown RBP11.64□□□□□ -0.55
CCDC171-208ENST00000486641 FAM83BQ5T0W9 1011 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 CALR3Q96L12 384 aaKnown RBP11.64□□□□□ -0.55
CCDC171-208ENST00000486641 PRMT1Q99873 361 aaKnown RBP11.64□□□□□ -0.55
CCDC171-208ENST00000486641 CELF4Q9BZC1 486 aaKnown RBP11.64□□□□□ -0.55
CCDC171-208ENST00000486641 TANGO6Q9C0B7 1094 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 DPH5Q9H2P9 285 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 SAMD15Q9P1V8 674 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 ATP6V0A2Q9Y487 856 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 DOCK2Q92608 1830 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 IGF2BP3O00425 579 aaKnown RBP eCLIP11.63□□□□□ -0.55
CCDC171-208ENST00000486641 KRIT1O00522 736 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 LIN7AO14910 233 aaPredicted RBP11.63□□□□□ -0.55
CCDC171-208ENST00000486641 NMT2O60551 498 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 UPP2O95045 317 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 MMP13P45452 471 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 USP11P51784 963 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 RBBP5Q15291 538 aaKnown RBP11.63□□□□□ -0.55
CCDC171-208ENST00000486641 PUM3Q15397 648 aaKnown RBP11.63□□□□□ -0.55
CCDC171-208ENST00000486641 TXNRD1Q16881 649 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 COBLL1Q53SF7 1204 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 ADGRA1Q86SQ6 560 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 METTL13Q8N6R0 699 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 GPKOWQ92917 476 aaPredicted RBP eCLIP11.63□□□□□ -0.55
CCDC171-208ENST00000486641 FAM167BQ9BTA0 163 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 CUEDC2Q9H467 287 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 ECT2Q9H8V3 914 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 CEP72Q9P209 647 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 NOC2LQ9Y3T9 749 aaKnown RBP11.63□□□□□ -0.55
CCDC171-208ENST00000486641 MYH4Q9Y623 1939 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 EIF4E1BA6NMX2 242 aaKnown RBP11.63□□□□□ -0.55
CCDC171-208ENST00000486641 PGRMC1O00264 195 aaKnown RBP11.63□□□□□ -0.55
CCDC171-208ENST00000486641 VIMP08670 466 aaKnown RBP11.63□□□□□ -0.55
CCDC171-208ENST00000486641 ZBTB48P10074 688 aaPredicted RBP11.63□□□□□ -0.55
CCDC171-208ENST00000486641 EIF3BP55884 814 aaKnown RBP11.63□□□□□ -0.55
CCDC171-208ENST00000486641 CTSWP56202 376 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 POLR2FP61218 127 aaKnown RBP11.63□□□□□ -0.55
CCDC171-208ENST00000486641 INF2Q27J81 1249 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 SYN2Q92777 582 aaPredicted RBP11.63□□□□□ -0.55
CCDC171-208ENST00000486641 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.63□□□□□ -0.55
CCDC171-208ENST00000486641 MAGEF1Q9HAY2 307 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 ARHGEF10LQ9HCE6 1279 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 PCDHA4Q9UN74 947 aa11.63□□□□□ -0.55
CCDC171-208ENST00000486641 CCDC194A0A1B0GVG4 234 aa11.62□□□□□ -0.55
CCDC171-208ENST00000486641 PPFIA2O75334 1257 aa11.62□□□□□ -0.55
CCDC171-208ENST00000486641 KRT16P08779 473 aa11.62□□□□□ -0.55
CCDC171-208ENST00000486641 CALML3P27482 149 aa11.62□□□□□ -0.55
CCDC171-208ENST00000486641 IFI35P80217 286 aaPredicted RBP11.62□□□□□ -0.55
CCDC171-208ENST00000486641 MKRN4PQ13434 485 aaPredicted RBP11.62□□□□□ -0.55
CCDC171-208ENST00000486641 ANKRD20A2Q5SQ80 823 aa11.62□□□□□ -0.55
CCDC171-208ENST00000486641 ANKRD20A1Q5TYW2 823 aa11.62□□□□□ -0.55
CCDC171-208ENST00000486641 ANKRD20A3Q5VUR7 823 aa11.62□□□□□ -0.55
CCDC171-208ENST00000486641 DNAAF5Q86Y56 855 aa11.62□□□□□ -0.55
CCDC171-208ENST00000486641 THEMISQ8N1K5 641 aaPredicted RBP11.62□□□□□ -0.55
CCDC171-208ENST00000486641 KIF2BQ8N4N8 673 aa11.62□□□□□ -0.55
CCDC171-208ENST00000486641 SEC14L1Q92503 715 aa11.62□□□□□ -0.55
CCDC171-208ENST00000486641 TXLNGYQ9BZA5 131 aa11.62□□□□□ -0.55
CCDC171-208ENST00000486641 TRIM31Q9BZY9 425 aa11.62□□□□□ -0.55
CCDC171-208ENST00000486641 PCDHA6Q9UN73 950 aa11.62□□□□□ -0.55
CCDC171-208ENST00000486641 PCDHA8Q9Y5H6 950 aa11.62□□□□□ -0.55
CCDC171-208ENST00000486641 ABCB11O95342 1321 aa11.62□□□□□ -0.55
CCDC171-208ENST00000486641 TLDC2A0PJX2 215 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 M0R2N6 131 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 CYP7A1P22680 504 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 RAB27AP51159 221 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 GALNTL6Q49A17 601 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 LRRC55Q6ZSA7 311 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 PROSER2Q86WR7 435 aaPredicted RBP11.61□□□□□ -0.55
CCDC171-208ENST00000486641 NUCKS1Q9H1E3 243 aaKnown RBP11.61□□□□□ -0.55
CCDC171-208ENST00000486641 EPB41L4BQ9H329 900 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 TCP11L1Q9NUJ3 509 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 INTS9Q9NV88 658 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms