RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 CHMP2AO43633 222 aa14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 SLITRK3O94933 977 aa14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 GNRH1P01148 92 aa14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 CCDC192P0DO97 292 aa14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 XRCC6P12956 609 aaKnown RBP eCLIP14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 XRCC5P13010 732 aaKnown RBP14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 MDM2Q00987 491 aaPredicted RBP14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 POSTNQ15063 836 aa14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 NAALADL2Q58DX5 795 aa14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 OLFML2BQ68BL8 750 aa14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 IQSEC1Q6DN90 963 aa14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 PDXDC2PQ6P474 469 aa14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 LRSAM1Q6UWE0 723 aa14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 TRMT44Q8IYL2 757 aaKnown RBP14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 NPLOC4Q8TAT6 608 aa14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 PNMA5Q96PV4 448 aa14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 NACC1Q96RE7 527 aa14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 BMP2KQ9NSY1 1161 aaPredicted RBP14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 KBTBD4Q9NVX7 518 aa14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 DDX41Q9UJV9 622 aaKnown RBP14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 KIAA1024Q9UPX6 916 aa14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 LCTP09848 1927 aa14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 PLXNB2O15031 1838 aa14.85□□□□□ -0.03
VTI1BP1-201ENST00000486325 GTPBP6O43824 516 aaPredicted RBP14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 MED24O75448 989 aa14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 PSAPP07602 524 aa14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 SPATA31C1P0DKV0 1188 aa14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 HSPA6P17066 643 aa14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 QARSP47897 775 aaKnown RBP14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 MAP2K1Q02750 393 aaPredicted RBP14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 MIS18BP1Q6P0N0 1132 aa14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 CCDC62Q6P9F0 684 aa14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 EEPD1Q7L9B9 569 aa14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 TPH2Q8IWU9 490 aa14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 CKAP2LQ8IYA6 745 aa14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 LARP4BQ92615 738 aaKnown RBP14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 RAD54LQ92698 747 aa14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 PLIN2Q99541 437 aa14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 APBA2Q99767 749 aa14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 GTPBP4Q9BZE4 634 aaKnown RBP14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 ZSWIM4Q9H7M6 989 aa14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 MLXIPQ9HAP2 919 aa14.84□□□□□ -0.03
VTI1BP1-201ENST00000486325 ZNF236Q9UL36 1845 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 NKRFO15226 690 aaKnown RBP eCLIP14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 ATG7O95352 703 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 LYPLA2O95372 231 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 CAVIN2O95810 425 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 SNAI1O95863 264 aaPredicted RBP14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 TXNP10599 105 aaKnown RBP14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 CYP2B6P20813 491 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 AFMP43652 599 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 PSMC5P62195 406 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 HTRA3P83110 453 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 SP2Q02086 613 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 ACVR2BQ13705 512 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 METTL7BQ6UX53 244 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 CYFIP1Q7L576 1253 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 DHX37Q8IY37 1157 aaKnown RBP14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 SMARCE1Q969G3 411 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 CCDC47Q96A33 483 aaKnown RBP14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 DYDC2Q96IM9 177 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 GSDMAQ96QA5 445 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 BEGAINQ9BUH8 593 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 RGL1Q9NZL6 768 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 NRBP1Q9UHY1 535 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 TUBE1Q9UJT0 475 aa14.83□□□□□ -0.04
VTI1BP1-201ENST00000486325 KIAA1217Q5T5P2 1943 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 DOCK3Q8IZD9 2030 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 POTEB3A0JP26 581 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 GPR25O00155 361 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 EYA4O95677 639 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 GGPS1O95749 300 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 CCNE2O96020 404 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 UBA1P22314 1058 aaKnown RBP14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 ACTR2P61160 394 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 PNOCQ13519 176 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 LAMC2Q13753 1193 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 ECM1Q16610 540 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 CELF3Q5SZQ8 465 aaKnown RBP14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 NT5DC1Q5TFE4 455 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 TAPT1Q6NXT6 567 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 POTEBQ6S5H4 581 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 ABHD15Q6UXT9 468 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 FBXO16Q8IX29 292 aaPredicted RBP14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 C4orf19Q8IY42 314 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 TRIML1Q8N9V2 468 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 SEPT1Q8WYJ6 367 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 ATP6V0A1Q93050 837 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 ERO1AQ96HE7 468 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 TRIM47Q96LD4 638 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 C7orf25Q9BPX7 421 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 BLOC1S4Q9NUP1 217 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 RMND1Q9NWS8 449 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 PCDHA5Q9Y5H7 936 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 PLXNA1Q9UIW2 1896 aa14.82□□□□□ -0.04
VTI1BP1-201ENST00000486325 FARP2O94887 1054 aaPredicted RBP14.81□□□□□ -0.04
VTI1BP1-201ENST00000486325 GH1P01241 217 aa14.81□□□□□ -0.04
VTI1BP1-201ENST00000486325 PLA2G4BP0C869 781 aa14.81□□□□□ -0.04
VTI1BP1-201ENST00000486325 SARSP49591 514 aaKnown RBP14.81□□□□□ -0.04
VTI1BP1-201ENST00000486325 C1QTNF8P60827 252 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms