RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 COL20A1Q9P218 1284 aa11.39□□□□□ -0.59
PTPN7-213ENST00000486116 SORBS3O60504 671 aa11.38□□□□□ -0.59
PTPN7-213ENST00000486116 PPFIA3O75145 1194 aa11.38□□□□□ -0.59
PTPN7-213ENST00000486116 PPFIA4O75335 1185 aa11.38□□□□□ -0.59
PTPN7-213ENST00000486116 GHRP10912 638 aa11.38□□□□□ -0.59
PTPN7-213ENST00000486116 HOXB3P14651 431 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-213ENST00000486116 ATP5JP18859 108 aa11.38□□□□□ -0.59
PTPN7-213ENST00000486116 TDO2P48775 406 aa11.38□□□□□ -0.59
PTPN7-213ENST00000486116 ATXN1P54253 815 aaKnown RBP11.38□□□□□ -0.59
PTPN7-213ENST00000486116 ERVFC1P60507 584 aa11.38□□□□□ -0.59
PTPN7-213ENST00000486116 PAN2Q504Q3 1202 aaKnown RBP11.38□□□□□ -0.59
PTPN7-213ENST00000486116 LINC01599Q8WXQ3 324 aa11.38□□□□□ -0.59
PTPN7-213ENST00000486116 TBC1D5Q92609 795 aa11.38□□□□□ -0.59
PTPN7-213ENST00000486116 COL26A1Q96A83 441 aa11.38□□□□□ -0.59
PTPN7-213ENST00000486116 CDCA3Q99618 268 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-213ENST00000486116 EHMT1Q9H9B1 1298 aa11.38□□□□□ -0.59
PTPN7-213ENST00000486116 FRMPD2Q68DX3 1309 aaPredicted RBP11.37□□□□□ -0.59
PTPN7-213ENST00000486116 WDR19Q8NEZ3 1342 aa11.37□□□□□ -0.59
PTPN7-213ENST00000486116 FSD2A1L4K1 749 aa11.37□□□□□ -0.59
PTPN7-213ENST00000486116 FSCN2O14926 492 aa11.37□□□□□ -0.59
PTPN7-213ENST00000486116 CHRNA1P02708 482 aa11.37□□□□□ -0.59
PTPN7-213ENST00000486116 IFIT2P09913 472 aaKnown RBP11.37□□□□□ -0.59
PTPN7-213ENST00000486116 LPIN1Q14693 890 aa11.37□□□□□ -0.59
PTPN7-213ENST00000486116 STXBP2Q15833 593 aa11.37□□□□□ -0.59
PTPN7-213ENST00000486116 MYSM1Q5VVJ2 828 aa11.37□□□□□ -0.59
PTPN7-213ENST00000486116 ZSCAN25Q6NSZ9 544 aa11.37□□□□□ -0.59
PTPN7-213ENST00000486116 CLASRPQ8N2M8 674 aaKnown RBP11.37□□□□□ -0.59
PTPN7-213ENST00000486116 RGS22Q8NE09 1264 aa11.37□□□□□ -0.59
PTPN7-213ENST00000486116 MICAL1Q8TDZ2 1067 aa11.37□□□□□ -0.59
PTPN7-213ENST00000486116 OSBP2Q969R2 916 aa11.37□□□□□ -0.59
PTPN7-213ENST00000486116 GPCPD1Q9NPB8 672 aa11.37□□□□□ -0.59
PTPN7-213ENST00000486116 SUPT16HQ9Y5B9 1047 aaKnown RBP11.37□□□□□ -0.59
PTPN7-213ENST00000486116 MRVI1Q9Y6F6 885 aa11.37□□□□□ -0.59
PTPN7-213ENST00000486116 C2orf16Q68DN1 1984 aa11.37□□□□□ -0.59
PTPN7-213ENST00000486116 SETXQ7Z333 2677 aaKnown RBP11.37□□□□□ -0.59
PTPN7-213ENST00000486116 CACNA1IQ9P0X4 2223 aa11.36□□□□□ -0.59
PTPN7-213ENST00000486116 SRGAP2BP0DMP2 458 aa11.36□□□□□ -0.59
PTPN7-213ENST00000486116 NOVP48745 357 aa11.36□□□□□ -0.59
PTPN7-213ENST00000486116 GATMP50440 423 aa11.36□□□□□ -0.59
PTPN7-213ENST00000486116 MGAT3Q09327 533 aa11.36□□□□□ -0.59
PTPN7-213ENST00000486116 ACAP1Q15027 740 aa11.36□□□□□ -0.59
PTPN7-213ENST00000486116 KIAA0319Q5VV43 1072 aa11.36□□□□□ -0.59
PTPN7-213ENST00000486116 LLGL2Q6P1M3 1020 aa11.36□□□□□ -0.59
PTPN7-213ENST00000486116 SYTL5Q8TDW5 730 aaPredicted RBP11.36□□□□□ -0.59
PTPN7-213ENST00000486116 NSUN6Q8TEA1 469 aaKnown RBP11.36□□□□□ -0.59
PTPN7-213ENST00000486116 RIN2Q8WYP3 895 aaPredicted RBP11.36□□□□□ -0.59
PTPN7-213ENST00000486116 SPATA33Q96N06 139 aa11.36□□□□□ -0.59
PTPN7-213ENST00000486116 IWS1Q96ST2 819 aa11.36□□□□□ -0.59
PTPN7-213ENST00000486116 RTP3Q9BQQ7 232 aa11.36□□□□□ -0.59
PTPN7-213ENST00000486116 BCL11AQ9H165 835 aa11.36□□□□□ -0.59
PTPN7-213ENST00000486116 ERVK-5Q9HDB9 667 aa11.36□□□□□ -0.59
PTPN7-213ENST00000486116 SETD4Q9NVD3 440 aa11.36□□□□□ -0.59
PTPN7-213ENST00000486116 LIMD1Q9UGP4 676 aa11.36□□□□□ -0.59
PTPN7-213ENST00000486116 PATJQ8NI35 1801 aa11.36□□□□□ -0.59
PTPN7-213ENST00000486116 ZFYVE26Q68DK2 2539 aa11.36□□□□□ -0.59
PTPN7-213ENST00000486116 H3BRB1 525 aa11.35□□□□□ -0.59
PTPN7-213ENST00000486116 GPAA1O43292 621 aa11.35□□□□□ -0.59
PTPN7-213ENST00000486116 ADRB1P08588 477 aa11.35□□□□□ -0.59
PTPN7-213ENST00000486116 HOXB8P17481 243 aaPredicted RBP11.35□□□□□ -0.59
PTPN7-213ENST00000486116 ADAM17P78536 824 aa11.35□□□□□ -0.59
PTPN7-213ENST00000486116 UBE3AQ05086 875 aa11.35□□□□□ -0.59
PTPN7-213ENST00000486116 USH1GQ495M9 461 aa11.35□□□□□ -0.59
PTPN7-213ENST00000486116 PPP4R3BQ5MIZ7 849 aa11.35□□□□□ -0.59
PTPN7-213ENST00000486116 CELF3Q5SZQ8 465 aaKnown RBP11.35□□□□□ -0.59
PTPN7-213ENST00000486116 RTN4RL1Q86UN2 441 aaPredicted RBP11.35□□□□□ -0.59
PTPN7-213ENST00000486116 IFNL3Q8IZI9 196 aa11.35□□□□□ -0.59
PTPN7-213ENST00000486116 ZDHHC14Q8IZN3 488 aa11.35□□□□□ -0.59
PTPN7-213ENST00000486116 SUMF1Q8NBK3 374 aa11.35□□□□□ -0.59
PTPN7-213ENST00000486116 RASGRP4Q8TDF6 673 aa11.35□□□□□ -0.59
PTPN7-213ENST00000486116 RMDN3Q96TC7 470 aa11.35□□□□□ -0.59
PTPN7-213ENST00000486116 TUT1Q9H6E5 874 aaKnown RBP11.35□□□□□ -0.59
PTPN7-213ENST00000486116 PNMA2Q9UL42 364 aa11.35□□□□□ -0.59
PTPN7-213ENST00000486116 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.35□□□□□ -0.59
PTPN7-213ENST00000486116 MIA3Q5JRA6 1907 aa11.35□□□□□ -0.59
PTPN7-213ENST00000486116 M0R2C6 588 aa11.34□□□□□ -0.59
PTPN7-213ENST00000486116 EIF3JO75822 258 aaKnown RBP11.34□□□□□ -0.59
PTPN7-213ENST00000486116 GGPS1O95749 300 aa11.34□□□□□ -0.59
PTPN7-213ENST00000486116 LGALS2P05162 132 aa11.34□□□□□ -0.59
PTPN7-213ENST00000486116 EIF2AK2P19525 551 aaKnown RBP11.34□□□□□ -0.59
PTPN7-213ENST00000486116 SP2Q02086 613 aa11.34□□□□□ -0.59
PTPN7-213ENST00000486116 PPARAQ07869 468 aa11.34□□□□□ -0.59
PTPN7-213ENST00000486116 HSP90AB4PQ58FF6 505 aa11.34□□□□□ -0.59
PTPN7-213ENST00000486116 NPAS4Q8IUM7 802 aa11.34□□□□□ -0.59
PTPN7-213ENST00000486116 TDRD5Q8NAT2 981 aaKnown RBP11.34□□□□□ -0.59
PTPN7-213ENST00000486116 LMBR1Q8WVP7 490 aa11.34□□□□□ -0.59
PTPN7-213ENST00000486116 KIF1BPQ96EK5 621 aa11.34□□□□□ -0.59
PTPN7-213ENST00000486116 CHAMP1Q96JM3 812 aa11.34□□□□□ -0.59
PTPN7-213ENST00000486116 NECTIN4Q96NY8 510 aa11.34□□□□□ -0.59
PTPN7-213ENST00000486116 ASPMQ8IZT6 3477 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 DCDC2BA2VCK2 349 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 TSPY2A6NKD2 308 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 HIDE1A8MVS5 230 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 ANP32CO43423 234 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 FGF18O76093 207 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 APPP05067 770 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 NR3C2P08235 984 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 WEE2P0C1S8 567 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 SP9P0CG40 484 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 APOBRQ0VD83 1088 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 FBXO47Q5MNV8 452 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms