RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 YBX2Q9Y2T7 364 aaKnown RBP21.03■□□□□ 0.96
PRPF40A-209ENST00000486100 PCDHA11Q9Y5I1 949 aa21.03■□□□□ 0.96
PRPF40A-209ENST00000486100 MEIS1O00470 390 aa21.02■□□□□ 0.96
PRPF40A-209ENST00000486100 TREHO43280 583 aa21.02■□□□□ 0.96
PRPF40A-209ENST00000486100 CCT2P78371 535 aaKnown RBP21.02■□□□□ 0.96
PRPF40A-209ENST00000486100 JAKMIP3Q5VZ66 844 aa21.02■□□□□ 0.96
PRPF40A-209ENST00000486100 MCTP2Q6DN12 878 aa21.02■□□□□ 0.96
PRPF40A-209ENST00000486100 SLC9A7Q96T83 725 aa21.02■□□□□ 0.96
PRPF40A-209ENST00000486100 SLC28A3Q9HAS3 691 aa21.02■□□□□ 0.96
PRPF40A-209ENST00000486100 ARP10275 920 aa21.01■□□□□ 0.95
PRPF40A-209ENST00000486100 FOSL2P15408 326 aa21.01■□□□□ 0.95
PRPF40A-209ENST00000486100 GNA11P29992 359 aa21.01■□□□□ 0.95
PRPF40A-209ENST00000486100 ZNF76P36508 570 aa21.01■□□□□ 0.95
PRPF40A-209ENST00000486100 THPOP40225 353 aa21.01■□□□□ 0.95
PRPF40A-209ENST00000486100 ADAM17P78536 824 aa21.01■□□□□ 0.95
PRPF40A-209ENST00000486100 ARHGAP4P98171 946 aa21.01■□□□□ 0.95
PRPF40A-209ENST00000486100 CNKSR3Q6P9H4 555 aa21.01■□□□□ 0.95
PRPF40A-209ENST00000486100 ZNF274Q96GC6 653 aaPredicted RBP21.01■□□□□ 0.95
PRPF40A-209ENST00000486100 SLC26A6Q9BXS9 759 aa21.01■□□□□ 0.95
PRPF40A-209ENST00000486100 NCOA5Q9HCD5 579 aaKnown RBP21.01■□□□□ 0.95
PRPF40A-209ENST00000486100 JPH1Q9HDC5 661 aaPredicted RBP21.01■□□□□ 0.95
PRPF40A-209ENST00000486100 SLC9A2Q9UBY0 812 aa21.01■□□□□ 0.95
PRPF40A-209ENST00000486100 NRCAMQ92823 1304 aa21.01■□□□□ 0.95
PRPF40A-209ENST00000486100 RSPH10B2B2RC85 870 aa21■□□□□ 0.95
PRPF40A-209ENST00000486100 CYP3A4P08684 503 aa21■□□□□ 0.95
PRPF40A-209ENST00000486100 RSPH10BP0C881 870 aa21■□□□□ 0.95
PRPF40A-209ENST00000486100 NIPA1Q7RTP0 329 aa21■□□□□ 0.95
PRPF40A-209ENST00000486100 GLG1Q92896 1179 aa21■□□□□ 0.95
PRPF40A-209ENST00000486100 SDF4Q9BRK5 362 aa21■□□□□ 0.95
PRPF40A-209ENST00000486100 UPF3BQ9BZI7 483 aaKnown RBP21■□□□□ 0.95
PRPF40A-209ENST00000486100 SMARCAD1Q9H4L7 1026 aa21■□□□□ 0.95
PRPF40A-209ENST00000486100 AGO4Q9HCK5 861 aaKnown RBP21■□□□□ 0.95
PRPF40A-209ENST00000486100 ERAP1Q9NZ08 941 aa21■□□□□ 0.95
PRPF40A-209ENST00000486100 NFASCO94856 1347 aa21■□□□□ 0.95
PRPF40A-209ENST00000486100 PPFIA3O75145 1194 aa20.99■□□□□ 0.95
PRPF40A-209ENST00000486100 CAND2O75155 1236 aa20.99■□□□□ 0.95
PRPF40A-209ENST00000486100 MYOGP15173 224 aa20.99■□□□□ 0.95
PRPF40A-209ENST00000486100 MBTPS1Q14703 1052 aa20.99■□□□□ 0.95
PRPF40A-209ENST00000486100 MAFAQ8NHW3 353 aaPredicted RBP20.99■□□□□ 0.95
PRPF40A-209ENST00000486100 CRYGNQ8WXF5 182 aa20.99■□□□□ 0.95
PRPF40A-209ENST00000486100 PDRG1Q9NUG6 133 aa20.99■□□□□ 0.95
PRPF40A-209ENST00000486100 EMSYQ7Z589 1322 aa20.99■□□□□ 0.95
PRPF40A-209ENST00000486100 ABHD14A-ACY1A0A1B0GW23 586 aa20.98■□□□□ 0.95
PRPF40A-209ENST00000486100 KIF28PB7ZC32 967 aa20.98■□□□□ 0.95
PRPF40A-209ENST00000486100 ADAMTS3O15072 1205 aa20.98■□□□□ 0.95
PRPF40A-209ENST00000486100 LGR5O75473 907 aa20.98■□□□□ 0.95
PRPF40A-209ENST00000486100 KCNJ6P48051 423 aa20.98■□□□□ 0.95
PRPF40A-209ENST00000486100 ITGB3BPQ13352 177 aaPredicted RBP20.98■□□□□ 0.95
PRPF40A-209ENST00000486100 HERC6Q8IVU3 1022 aa20.98■□□□□ 0.95
PRPF40A-209ENST00000486100 REXO1Q8N1G1 1221 aaKnown RBP20.98■□□□□ 0.95
PRPF40A-209ENST00000486100 CCDC148Q8NFR7 591 aa20.98■□□□□ 0.95
PRPF40A-209ENST00000486100 BICD2Q8TD16 824 aa20.98■□□□□ 0.95
PRPF40A-209ENST00000486100 LMBR1Q8WVP7 490 aa20.98■□□□□ 0.95
PRPF40A-209ENST00000486100 LARP6Q9BRS8 491 aaKnown RBP20.98■□□□□ 0.95
PRPF40A-209ENST00000486100 SCN5AQ14524 2016 aa20.97■□□□□ 0.95
PRPF40A-209ENST00000486100 FAM86B1E9PN63 330 aa20.97■□□□□ 0.95
PRPF40A-209ENST00000486100 FAM86B2P0C5J1 330 aa20.97■□□□□ 0.95
PRPF40A-209ENST00000486100 WDR5P61964 334 aaKnown RBP20.97■□□□□ 0.95
PRPF40A-209ENST00000486100 SSRP1Q08945 709 aaKnown RBP20.97■□□□□ 0.95
PRPF40A-209ENST00000486100 IKBKEQ14164 716 aa20.97■□□□□ 0.95
PRPF40A-209ENST00000486100 TCTN1Q2MV58 587 aa20.97■□□□□ 0.95
PRPF40A-209ENST00000486100 PPP2R2DQ66LE6 453 aa20.97■□□□□ 0.95
PRPF40A-209ENST00000486100 PLA2G4DQ86XP0 818 aa20.97■□□□□ 0.95
PRPF40A-209ENST00000486100 TRIM22Q8IYM9 498 aa20.97■□□□□ 0.95
PRPF40A-209ENST00000486100 PCYT2Q99447 389 aa20.97■□□□□ 0.95
PRPF40A-209ENST00000486100 GAS2L1Q99501 681 aaPredicted RBP20.97■□□□□ 0.95
PRPF40A-209ENST00000486100 PRDM12Q9H4Q4 367 aa20.97■□□□□ 0.95
PRPF40A-209ENST00000486100 AZI2Q9H6S1 392 aa20.97■□□□□ 0.95
PRPF40A-209ENST00000486100 SH3GLB2Q9NR46 395 aa20.97■□□□□ 0.95
PRPF40A-209ENST00000486100 CPLX1O14810 134 aa20.96■□□□□ 0.95
PRPF40A-209ENST00000486100 EFCAB14O75071 495 aa20.96■□□□□ 0.95
PRPF40A-209ENST00000486100 ATG7O95352 703 aa20.96■□□□□ 0.95
PRPF40A-209ENST00000486100 MARK3P27448 753 aa20.96■□□□□ 0.95
PRPF40A-209ENST00000486100 ACTR2P61160 394 aa20.96■□□□□ 0.95
PRPF40A-209ENST00000486100 PPFIA1Q13136 1202 aa20.96■□□□□ 0.95
PRPF40A-209ENST00000486100 DBF4BQ8NFT6 615 aa20.96■□□□□ 0.95
PRPF40A-209ENST00000486100 VPS54Q9P1Q0 977 aa20.96■□□□□ 0.95
PRPF40A-209ENST00000486100 IGLV3-22A0A075B6J6 115 aa20.95■□□□□ 0.94
PRPF40A-209ENST00000486100 ANAPC15P60006 121 aa20.95■□□□□ 0.94
PRPF40A-209ENST00000486100 GRIK4Q16099 956 aa20.95■□□□□ 0.94
PRPF40A-209ENST00000486100 TAF2Q6P1X5 1199 aa20.95■□□□□ 0.94
PRPF40A-209ENST00000486100 PLPPR4Q7Z2D5 763 aa20.95■□□□□ 0.94
PRPF40A-209ENST00000486100 RPAINQ86UA6 219 aa20.95■□□□□ 0.94
PRPF40A-209ENST00000486100 TNPO1Q92973 898 aaKnown RBP20.95■□□□□ 0.94
PRPF40A-209ENST00000486100 TRIP12Q14669 1992 aaPredicted RBP20.95■□□□□ 0.94
PRPF40A-209ENST00000486100 MBLAC1A4D2B0 266 aaPredicted RBP20.94■□□□□ 0.94
PRPF40A-209ENST00000486100 DEXIO95424 95 aa20.94■□□□□ 0.94
PRPF40A-209ENST00000486100 CA3P07451 260 aa20.94■□□□□ 0.94
PRPF40A-209ENST00000486100 STAT5BP51692 787 aa20.94■□□□□ 0.94
PRPF40A-209ENST00000486100 NLRP5P59047 1200 aa20.94■□□□□ 0.94
PRPF40A-209ENST00000486100 STK3Q13188 491 aa20.94■□□□□ 0.94
PRPF40A-209ENST00000486100 PLEKHG4Q58EX7 1191 aa20.94■□□□□ 0.94
PRPF40A-209ENST00000486100 FAM26DQ5JW98 314 aa20.94■□□□□ 0.94
PRPF40A-209ENST00000486100 CPLX2Q6PUV4 134 aaKnown RBP20.94■□□□□ 0.94
PRPF40A-209ENST00000486100 RASGRP4Q8TDF6 673 aa20.94■□□□□ 0.94
PRPF40A-209ENST00000486100 TANC1Q9C0D5 1861 aa20.94■□□□□ 0.94
PRPF40A-209ENST00000486100 RRN3P2A6NIE6 340 aa20.93■□□□□ 0.94
PRPF40A-209ENST00000486100 IPO5O00410 1097 aaKnown RBP20.93■□□□□ 0.94
PRPF40A-209ENST00000486100 DHX15O43143 795 aaKnown RBP20.93■□□□□ 0.94
PRPF40A-209ENST00000486100 TLL1O43897 1013 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms