RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 FBXW5Q969U6 566 aa6.03□□□□□ -1.44
VPS41-213ENST00000485955 CLIC6Q96NY7 704 aa6.03□□□□□ -1.44
VPS41-213ENST00000485955 OSBPL2Q9H1P3 480 aa6.03□□□□□ -1.44
VPS41-213ENST00000485955 CATSPERZQ9NTU4 200 aa6.03□□□□□ -1.44
VPS41-213ENST00000485955 NDOR1Q9UHB4 597 aa6.03□□□□□ -1.44
VPS41-213ENST00000485955 CDK11AQ9UQ88 783 aaPredicted RBP6.03□□□□□ -1.44
VPS41-213ENST00000485955 FAM90A27PA6NNH2 459 aa6.02□□□□□ -1.45
VPS41-213ENST00000485955 CNR2P34972 360 aa6.02□□□□□ -1.45
VPS41-213ENST00000485955 BUD31P41223 144 aaPredicted RBP6.02□□□□□ -1.45
VPS41-213ENST00000485955 JAM2P57087 298 aa6.02□□□□□ -1.45
VPS41-213ENST00000485955 GPR19Q15760 415 aa6.02□□□□□ -1.45
VPS41-213ENST00000485955 SKOR2Q2VWA4 1001 aaPredicted RBP6.02□□□□□ -1.45
VPS41-213ENST00000485955 ZC3H12BQ5HYM0 836 aaKnown RBP6.02□□□□□ -1.45
VPS41-213ENST00000485955 PRAMEF18Q5VWM3 479 aa6.02□□□□□ -1.45
VPS41-213ENST00000485955 CD276Q5ZPR3 534 aa6.02□□□□□ -1.45
VPS41-213ENST00000485955 C16orf59Q7L2K0 433 aa6.02□□□□□ -1.45
VPS41-213ENST00000485955 GSTCDQ8NEC7 633 aa6.02□□□□□ -1.45
VPS41-213ENST00000485955 THAP3Q8WTV1 239 aaPredicted RBP6.02□□□□□ -1.45
VPS41-213ENST00000485955 ZCCHC14Q8WYQ9 949 aaKnown RBP6.02□□□□□ -1.45
VPS41-213ENST00000485955 SCLYQ96I15 445 aa6.02□□□□□ -1.45
VPS41-213ENST00000485955 TMEM209Q96SK2 561 aa6.02□□□□□ -1.45
VPS41-213ENST00000485955 KRTAP4-2Q9BYR5 136 aa6.02□□□□□ -1.45
VPS41-213ENST00000485955 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.01□□□□□ -1.45
VPS41-213ENST00000485955 MAN2B1O00754 1011 aa6.01□□□□□ -1.45
VPS41-213ENST00000485955 KCNK3O14649 394 aa6.01□□□□□ -1.45
VPS41-213ENST00000485955 RASGRP1O95267 797 aa6.01□□□□□ -1.45
VPS41-213ENST00000485955 COL6A1P12109 1028 aa6.01□□□□□ -1.45
VPS41-213ENST00000485955 SYN1P17600 705 aa6.01□□□□□ -1.45
VPS41-213ENST00000485955 PFKPQ01813 784 aa6.01□□□□□ -1.45
VPS41-213ENST00000485955 BMS1Q14692 1282 aaKnown RBP6.01□□□□□ -1.45
VPS41-213ENST00000485955 C2orf27AQ580R0 203 aa6.01□□□□□ -1.45
VPS41-213ENST00000485955 FAM26FQ5R3K3 315 aa6.01□□□□□ -1.45
VPS41-213ENST00000485955 UBXN11Q5T124 520 aa6.01□□□□□ -1.45
VPS41-213ENST00000485955 PTRH1Q86Y79 214 aaKnown RBP6.01□□□□□ -1.45
VPS41-213ENST00000485955 DTX3Q8N9I9 347 aa6.01□□□□□ -1.45
VPS41-213ENST00000485955 KANSL2Q9H9L4 492 aa6.01□□□□□ -1.45
VPS41-213ENST00000485955 SRPK3Q9UPE1 567 aa6.01□□□□□ -1.45
VPS41-213ENST00000485955 PTCH2Q9Y6C5 1203 aa6.01□□□□□ -1.45
VPS41-213ENST00000485955 CCDC66A2RUB6 948 aa6□□□□□ -1.45
VPS41-213ENST00000485955 MROH6A6NGR9 719 aa6□□□□□ -1.45
VPS41-213ENST00000485955 KRT15P19012 456 aa6□□□□□ -1.45
VPS41-213ENST00000485955 DNM2P50570 870 aa6□□□□□ -1.45
VPS41-213ENST00000485955 SKIDA1Q1XH10 827 aa6□□□□□ -1.45
VPS41-213ENST00000485955 TRIM61Q5EBN2 209 aa6□□□□□ -1.45
VPS41-213ENST00000485955 BTBD8Q5XKL5 378 aa6□□□□□ -1.45
VPS41-213ENST00000485955 VASNQ6EMK4 673 aa6□□□□□ -1.45
VPS41-213ENST00000485955 ZC3H7AQ8IWR0 971 aaKnown RBP6□□□□□ -1.45
VPS41-213ENST00000485955 ZSWIM2Q8NEG5 633 aa6□□□□□ -1.45
VPS41-213ENST00000485955 YTHDC1Q96MU7 727 aaKnown RBP6□□□□□ -1.45
VPS41-213ENST00000485955 BDH2Q9BUT1 245 aa6□□□□□ -1.45
VPS41-213ENST00000485955 L2HGDHQ9H9P8 463 aa6□□□□□ -1.45
VPS41-213ENST00000485955 SMURF1Q9HCE7 757 aa6□□□□□ -1.45
VPS41-213ENST00000485955 DLL4Q9NR61 685 aa6□□□□□ -1.45
VPS41-213ENST00000485955 NUB1Q9Y5A7 615 aa6□□□□□ -1.45
VPS41-213ENST00000485955 ZNF561-AS1K7EIQ3 104 aa5.99□□□□□ -1.45
VPS41-213ENST00000485955 CELA3BP08861 270 aa5.99□□□□□ -1.45
VPS41-213ENST00000485955 ENO2P09104 434 aaPredicted RBP5.99□□□□□ -1.45
VPS41-213ENST00000485955 KCNA6P17658 529 aa5.99□□□□□ -1.45
VPS41-213ENST00000485955 PTPN1P18031 435 aaKnown RBP5.99□□□□□ -1.45
VPS41-213ENST00000485955 GLRBP48167 497 aa5.99□□□□□ -1.45
VPS41-213ENST00000485955 ST5P78524 1137 aa5.99□□□□□ -1.45
VPS41-213ENST00000485955 KIAA2012Q0VF49 1180 aa5.99□□□□□ -1.45
VPS41-213ENST00000485955 SEC23AQ15436 765 aa5.99□□□□□ -1.45
VPS41-213ENST00000485955 TRMT10BQ6PF06 316 aaKnown RBP5.99□□□□□ -1.45
VPS41-213ENST00000485955 FGD2Q7Z6J4 655 aa5.99□□□□□ -1.45
VPS41-213ENST00000485955 MBD6Q96DN6 1003 aa5.99□□□□□ -1.45
VPS41-213ENST00000485955 LCORQ96JN0 433 aaPredicted RBP5.99□□□□□ -1.45
VPS41-213ENST00000485955 MAGEB10Q96LZ2 347 aaPredicted RBP5.99□□□□□ -1.45
VPS41-213ENST00000485955 DRC1Q96MC2 740 aa5.99□□□□□ -1.45
VPS41-213ENST00000485955 INVSQ9Y283 1065 aa5.99□□□□□ -1.45
VPS41-213ENST00000485955 COQ6Q9Y2Z9 468 aa5.99□□□□□ -1.45
VPS41-213ENST00000485955 ZNF839A8K0R7 811 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 KCNQ2O43526 872 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 B4GALT3O60512 393 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 EFCAB14O75071 495 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 IL18BPO95998 194 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 CYP1A1P04798 512 aaPredicted RBP5.98□□□□□ -1.45
VPS41-213ENST00000485955 LACTBP83111 547 aaPredicted RBP5.98□□□□□ -1.45
VPS41-213ENST00000485955 PLP2Q04941 152 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 DBPQ10586 325 aaPredicted RBP5.98□□□□□ -1.45
VPS41-213ENST00000485955 SQSTM1Q13501 440 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 CRY1Q16526 586 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 CCDC144BQ3MJ40 725 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 ABHD17CQ6PCB6 329 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 BRAPQ7Z569 592 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 NLGN4XQ8N0W4 816 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 STPG3Q8N7X2 389 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 NUDT10Q8NFP7 164 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 NUDT11Q96G61 164 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 CLUHP3Q96NS8 147 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 TMEM168Q9H0V1 697 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 ZSWIM4Q9H7M6 989 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 SLC39A2Q9NP94 309 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 RIC8BQ9NVN3 520 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 ARHGAP20Q9P2F6 1191 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 ZFP69BQ9UJL9 534 aa5.98□□□□□ -1.45
VPS41-213ENST00000485955 CCDC163A0A0D9SF12 145 aa5.97□□□□□ -1.45
VPS41-213ENST00000485955 TCRBV16S1A1N1A0A5B0 115 aa5.97□□□□□ -1.45
VPS41-213ENST00000485955 C9orf118A6NHY6 69 aa5.97□□□□□ -1.45
VPS41-213ENST00000485955 GSTA4O15217 222 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms