RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 TRIM60Q495X7 471 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 EARS2Q5JPH6 523 aaKnown RBP6.6□□□□□ -1.35
CUX1-208ENST00000485792 BLOC1S2Q6QNY1 142 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 SLC39A5Q6ZMH5 540 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 ANKRD33Q7Z3H0 272 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 ZNF713Q8N859 430 aaPredicted RBP6.6□□□□□ -1.35
CUX1-208ENST00000485792 NUP133Q8WUM0 1156 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 KAT2BQ92831 832 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 PHKBQ93100 1093 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 TRIM43Q96BQ3 446 aaPredicted RBP6.6□□□□□ -1.35
CUX1-208ENST00000485792 TOX2Q96NM4 488 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 RMDN3Q96TC7 470 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 GDF15Q99988 308 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 USB1Q9BQ65 265 aaKnown RBP6.6□□□□□ -1.35
CUX1-208ENST00000485792 XPNPEP3Q9NQH7 507 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 PDLIM7Q9NR12 457 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 MYH11P35749 1972 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 TCHHQ07283 1943 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 NLRC5Q86WI3 1866 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 ESYT2A0FGR8 921 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 PTPDC1A2A3K4 754 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 GOLGA8BA8MQT2 603 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 CFAP99D6REC4 459 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 SORBS3O60504 671 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 EIF5BO60841 1220 aaKnown RBP6.59□□□□□ -1.35
CUX1-208ENST00000485792 STAM2O75886 525 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 CD4P01730 458 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 ASGR1P07306 291 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 ITGB5P18084 799 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 UBA1P22314 1058 aaKnown RBP6.59□□□□□ -1.35
CUX1-208ENST00000485792 CNGA1P29973 690 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 ACLYP53396 1101 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 AK2P54819 239 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 GPNMBQ14956 572 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 KCNA10Q16322 511 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 PFKFB3Q16875 520 aaPredicted RBP6.59□□□□□ -1.35
CUX1-208ENST00000485792 PPP1R18Q6NYC8 613 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 XRRA1Q6P2D8 792 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 TRAF7Q6Q0C0 670 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 RNF180Q86T96 592 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 TLK2Q86UE8 772 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 C7orf61Q8IZ16 206 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 FAM177A1Q8N128 213 aaPredicted RBP6.59□□□□□ -1.35
CUX1-208ENST00000485792 CCDC82Q8N4S0 544 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 CYP2W1Q8TAV3 490 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 PRR7Q8TB68 274 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 RASGRP4Q8TDF6 673 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 SCFD2Q8WU76 684 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 DHX38Q92620 1227 aaKnown RBP6.59□□□□□ -1.35
CUX1-208ENST00000485792 FERMT2Q96AC1 680 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 LENG9Q96B70 501 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 RRP36Q96EU6 259 aaKnown RBP6.59□□□□□ -1.35
CUX1-208ENST00000485792 INPP4AQ96PE3 977 aaPredicted RBP6.59□□□□□ -1.35
CUX1-208ENST00000485792 SPSB2Q99619 263 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 RNF26Q9BY78 433 aaPredicted RBP6.59□□□□□ -1.35
CUX1-208ENST00000485792 SEZ6LQ9BYH1 1024 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 WDR11Q9BZH6 1224 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 ZMYND12Q9H0C1 365 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 BARHL2Q9NY43 387 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 DDX41Q9UJV9 622 aaKnown RBP6.59□□□□□ -1.35
CUX1-208ENST00000485792 ZMYND8Q9ULU4 1186 aaPredicted RBP6.59□□□□□ -1.35
CUX1-208ENST00000485792 CYP46A1Q9Y6A2 500 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 UNC80Q8N2C7 3258 aa6.59□□□□□ -1.35
CUX1-208ENST00000485792 IGLV3-22A0A075B6J6 115 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 CCDC196A0A1B0GTZ2 297 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 A0A1W2PPC1 479 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 GOLGA8AA7E2F4 631 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 GCOM1H8Y6P7 765 aaPredicted RBP6.58□□□□□ -1.36
CUX1-208ENST00000485792 KIAA0355O15063 1070 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 JAK2O60674 1132 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 ATP9AO75110 1047 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 CABYRO75952 493 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 CFBP00751 764 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 POLR2MP0CAP2 368 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 RBM25P49756 843 aaKnown RBP6.58□□□□□ -1.36
CUX1-208ENST00000485792 RTP1P59025 263 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 PURAQ00577 322 aaKnown RBP6.58□□□□□ -1.36
CUX1-208ENST00000485792 STXBP2Q15833 593 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 ME3Q16798 604 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 RTN1Q16799 776 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 LY6KQ17RY6 165 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 MSS51Q4VC12 460 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 PCNX4Q63HM2 1172 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 TRIM50Q86XT4 487 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 FAM160A2Q8N612 972 aaPredicted RBP6.58□□□□□ -1.36
CUX1-208ENST00000485792 PCSK9Q8NBP7 692 aaKnown RBP6.58□□□□□ -1.36
CUX1-208ENST00000485792 ZBTB10Q96DT7 871 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 SENP7Q9BQF6 1050 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 SENP6Q9GZR1 1112 aaPredicted RBP6.58□□□□□ -1.36
CUX1-208ENST00000485792 WNT8AQ9H1J5 351 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 RIC8AQ9NPQ8 531 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 TBX21Q9UL17 535 aa6.58□□□□□ -1.36
CUX1-208ENST00000485792 V9GY48 417 aaPredicted RBP6.58□□□□□ -1.36
CUX1-208ENST00000485792 VCANP13611 3396 aa6.57□□□□□ -1.36
CUX1-208ENST00000485792 TRIP11Q15643 1979 aa6.57□□□□□ -1.36
CUX1-208ENST00000485792 B4DLN1 442 aa6.57□□□□□ -1.36
CUX1-208ENST00000485792 SPATA31C2B4DYI2 1134 aa6.57□□□□□ -1.36
CUX1-208ENST00000485792 KBTBD13C9JR72 458 aa6.57□□□□□ -1.36
CUX1-208ENST00000485792 ARVCFO00192 962 aa6.57□□□□□ -1.36
CUX1-208ENST00000485792 HAS3O00219 553 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms