RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 TEKT3Q9BXF9 490 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 SMARCAD1Q9H4L7 1026 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 STARD7Q9NQZ5 370 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 FOXD4L1Q9NU39 408 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 DDX49Q9Y6V7 483 aaKnown RBP9.34□□□□□ -0.91
SF3A1-208ENST00000485618 IGLV3-22A0A075B6J6 115 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 A0A0U1RQG5 324 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-208ENST00000485618 TLR3O15455 904 aaKnown RBP9.33□□□□□ -0.92
SF3A1-208ENST00000485618 ARIH2O95376 493 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 MMP3P08254 477 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 SUPT20HL2P0C7V6 817 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 ARP10275 920 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 RTP1P59025 263 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 SP2Q02086 613 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 PTPN11Q06124 597 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-208ENST00000485618 TTC38Q5R3I4 469 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 C7orf31Q8N865 590 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 SLC5A5Q92911 643 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 ZFP91Q96JP5 570 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-208ENST00000485618 FAM161BQ96MY7 647 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 MBOAT7Q96N66 472 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 ZNF396Q96N95 335 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-208ENST00000485618 GPR20Q99678 358 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 ERAP1Q9NZ08 941 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 PCDHA12Q9UN75 941 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 PCDHA10Q9Y5I2 948 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 LTBP2Q14767 1821 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 KIAA1217Q5T5P2 1943 aa9.33□□□□□ -0.92
SF3A1-208ENST00000485618 A0A1W2PQ45 241 aaPredicted RBP9.32□□□□□ -0.92
SF3A1-208ENST00000485618 A0A1W2PQY0 241 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 DCDC2CA8MYV0 355 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 BACH1O14867 736 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 MSH4O15457 936 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 DTNBO60941 627 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 ATP9AO75110 1047 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 TDP2O95551 362 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 MCM7P33993 719 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 ACTR2P61160 394 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 NUCB2P80303 420 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 BEX3Q00994 111 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 SP4Q02446 784 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 HSDL1Q3SXM5 330 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 ATL3Q6DD88 541 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 NFRKBQ6P4R8 1299 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 CXCL17Q6UXB2 119 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 PLPPR4Q7Z2D5 763 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 ERMNQ8TAM6 284 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 COPS5Q92905 334 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 ATP6V0A1Q93050 837 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 GUCD1Q96NT3 240 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 COL25A1Q9BXS0 654 aaPredicted RBP9.32□□□□□ -0.92
SF3A1-208ENST00000485618 PRDM5Q9NQX1 630 aaPredicted RBP9.32□□□□□ -0.92
SF3A1-208ENST00000485618 PKD2L1Q9P0L9 805 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 CFAP45Q9UL16 551 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 NOD1Q9Y239 953 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 ATP11BQ9Y2G3 1177 aa9.32□□□□□ -0.92
SF3A1-208ENST00000485618 H3BRB1 525 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 ARVCFO00192 962 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 RPLP2P05387 115 aaKnown RBP9.31□□□□□ -0.92
SF3A1-208ENST00000485618 OR52Z1P0C646 297 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 ZSCAN22P10073 491 aaPredicted RBP9.31□□□□□ -0.92
SF3A1-208ENST00000485618 HOXD8P13378 290 aaPredicted RBP9.31□□□□□ -0.92
SF3A1-208ENST00000485618 TCF7P36402 384 aaPredicted RBP9.31□□□□□ -0.92
SF3A1-208ENST00000485618 STAT5BP51692 787 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 CHMP4BP1P59074 171 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 PURAQ00577 322 aaKnown RBP9.31□□□□□ -0.92
SF3A1-208ENST00000485618 SEMA3FQ13275 785 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 ITGB3BPQ13352 177 aaPredicted RBP9.31□□□□□ -0.92
SF3A1-208ENST00000485618 ITGA7Q13683 1181 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 ZNF174Q15697 407 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 UTP14CQ5TAP6 766 aaKnown RBP9.31□□□□□ -0.92
SF3A1-208ENST00000485618 ZNF697Q5TEC3 545 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 C1orf53Q5VUE5 145 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 CCSAPQ6IQ19 270 aaPredicted RBP9.31□□□□□ -0.92
SF3A1-208ENST00000485618 SLC39A5Q6ZMH5 540 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 DTHD1Q6ZMT9 781 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.31□□□□□ -0.92
SF3A1-208ENST00000485618 CKAP2LQ8IYA6 745 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 EXOC8Q8IYI6 725 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 SPRYD3Q8NCJ5 442 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 ETNPPLQ8TBG4 499 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 FERMT2Q96AC1 680 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 LENG1Q96BZ8 264 aaPredicted RBP9.31□□□□□ -0.92
SF3A1-208ENST00000485618 FAM167AQ96KS9 214 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 TOX2Q96NM4 488 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 TUT1Q9H6E5 874 aaKnown RBP9.31□□□□□ -0.92
SF3A1-208ENST00000485618 DISC1Q9NRI5 854 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 NRBP2Q9NSY0 501 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 LCTP09848 1927 aa9.31□□□□□ -0.92
SF3A1-208ENST00000485618 RRN3P2A6NIE6 340 aa9.3□□□□□ -0.92
SF3A1-208ENST00000485618 DDX39AO00148 427 aaKnown RBP9.3□□□□□ -0.92
SF3A1-208ENST00000485618 ADAMTS3O15072 1205 aa9.3□□□□□ -0.92
SF3A1-208ENST00000485618 ADCY6O43306 1168 aa9.3□□□□□ -0.92
SF3A1-208ENST00000485618 SORBS3O60504 671 aa9.3□□□□□ -0.92
SF3A1-208ENST00000485618 PSMD10O75832 226 aa9.3□□□□□ -0.92
SF3A1-208ENST00000485618 F2P00734 622 aa9.3□□□□□ -0.92
SF3A1-208ENST00000485618 LGALS2P05162 132 aa9.3□□□□□ -0.92
SF3A1-208ENST00000485618 PRPHP41219 470 aa9.3□□□□□ -0.92
SF3A1-208ENST00000485618 TXKP42681 527 aa9.3□□□□□ -0.92
SF3A1-208ENST00000485618 PSEN2P49810 448 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms