RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 IL9P15248 144 aa15.02■□□□□ -0
HDAC6-227ENST00000485102 TAF2Q6P1X5 1199 aa15.02■□□□□ -0
HDAC6-227ENST00000485102 POTEBQ6S5H4 581 aa15.02■□□□□ -0
HDAC6-227ENST00000485102 NCOA7Q8NI08 942 aa15.02■□□□□ -0
HDAC6-227ENST00000485102 IGDCC4Q8TDY8 1250 aa15.02■□□□□ -0
HDAC6-227ENST00000485102 LMBR1Q8WVP7 490 aa15.02■□□□□ -0
HDAC6-227ENST00000485102 IFIH1Q9BYX4 1025 aaKnown RBP15.02■□□□□ -0
HDAC6-227ENST00000485102 LMAN2LQ9H0V9 348 aa15.02■□□□□ -0
HDAC6-227ENST00000485102 NSUN3Q9H649 340 aaKnown RBP15.02■□□□□ -0
HDAC6-227ENST00000485102 SENP2Q9HC62 589 aa15.02■□□□□ -0
HDAC6-227ENST00000485102 FAM50BQ9Y247 325 aa15.02■□□□□ -0
HDAC6-227ENST00000485102 NLRC5Q86WI3 1866 aa15.01□□□□□ -0.01
HDAC6-227ENST00000485102 E7EWF7 191 aa15.01□□□□□ -0.01
HDAC6-227ENST00000485102 MEIS2O14770 477 aa15.01□□□□□ -0.01
HDAC6-227ENST00000485102 CHRNA1P02708 482 aa15.01□□□□□ -0.01
HDAC6-227ENST00000485102 CTSHP09668 335 aa15.01□□□□□ -0.01
HDAC6-227ENST00000485102 LINC00271P0C7V0 271 aa15.01□□□□□ -0.01
HDAC6-227ENST00000485102 CTC1Q2NKJ3 1217 aa15.01□□□□□ -0.01
HDAC6-227ENST00000485102 TCEAL5Q5H9L2 206 aa15.01□□□□□ -0.01
HDAC6-227ENST00000485102 CATIPQ7Z7H3 387 aa15.01□□□□□ -0.01
HDAC6-227ENST00000485102 RALYLQ86SE5 291 aaKnown RBP15.01□□□□□ -0.01
HDAC6-227ENST00000485102 NLRX1Q86UT6 975 aa15.01□□□□□ -0.01
HDAC6-227ENST00000485102 CLP1Q92989 425 aaKnown RBP15.01□□□□□ -0.01
HDAC6-227ENST00000485102 IL17RAQ96F46 866 aa15.01□□□□□ -0.01
HDAC6-227ENST00000485102 CDHR1Q96JP9 859 aa15.01□□□□□ -0.01
HDAC6-227ENST00000485102 LZTS2Q9BRK4 669 aa15.01□□□□□ -0.01
HDAC6-227ENST00000485102 RC3H2Q9HBD1 1191 aaKnown RBP15.01□□□□□ -0.01
HDAC6-227ENST00000485102 RTEL1Q9NZ71 1219 aa15.01□□□□□ -0.01
HDAC6-227ENST00000485102 RWDD3Q9Y3V2 267 aa15.01□□□□□ -0.01
HDAC6-227ENST00000485102 DOCK5Q9H7D0 1870 aa15.01□□□□□ -0.01
HDAC6-227ENST00000485102 MBLAC1A4D2B0 266 aaPredicted RBP15□□□□□ -0.01
HDAC6-227ENST00000485102 C19orf67A6NJJ6 358 aa15□□□□□ -0.01
HDAC6-227ENST00000485102 UPP2O95045 317 aa15□□□□□ -0.01
HDAC6-227ENST00000485102 RPLP2P05387 115 aaKnown RBP15□□□□□ -0.01
HDAC6-227ENST00000485102 GSPT1P15170 499 aaKnown RBP15□□□□□ -0.01
HDAC6-227ENST00000485102 BMPR1AP36894 532 aa15□□□□□ -0.01
HDAC6-227ENST00000485102 ARHGAP4P98171 946 aa15□□□□□ -0.01
HDAC6-227ENST00000485102 PTH1RQ03431 593 aa15□□□□□ -0.01
HDAC6-227ENST00000485102 TTC22Q5TAA0 569 aa15□□□□□ -0.01
HDAC6-227ENST00000485102 TRIM50Q86XT4 487 aa15□□□□□ -0.01
HDAC6-227ENST00000485102 CUL5Q93034 780 aa15□□□□□ -0.01
HDAC6-227ENST00000485102 GPRASP2Q96D09 838 aa15□□□□□ -0.01
HDAC6-227ENST00000485102 RBAK-RBAKDNI3L0D1 243 aa14.99□□□□□ -0.01
HDAC6-227ENST00000485102 MAFGO15525 162 aa14.99□□□□□ -0.01
HDAC6-227ENST00000485102 DDAH1O94760 285 aa14.99□□□□□ -0.01
HDAC6-227ENST00000485102 CHMLP26374 656 aa14.99□□□□□ -0.01
HDAC6-227ENST00000485102 KIF5BP33176 963 aa14.99□□□□□ -0.01
HDAC6-227ENST00000485102 LTBRP36941 435 aa14.99□□□□□ -0.01
HDAC6-227ENST00000485102 ANTXR2P58335 489 aa14.99□□□□□ -0.01
HDAC6-227ENST00000485102 MGAT3Q09327 533 aa14.99□□□□□ -0.01
HDAC6-227ENST00000485102 USP17L6PQ6QN14 398 aa14.99□□□□□ -0.01
HDAC6-227ENST00000485102 FAM43BQ6ZT52 329 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-227ENST00000485102 MB21D2Q8IYB1 491 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-227ENST00000485102 TMTC2Q8N394 836 aa14.99□□□□□ -0.01
HDAC6-227ENST00000485102 FIBCD1Q8N539 461 aa14.99□□□□□ -0.01
HDAC6-227ENST00000485102 EXOC6Q8TAG9 804 aa14.99□□□□□ -0.01
HDAC6-227ENST00000485102 SMARCC2Q8TAQ2 1214 aa14.99□□□□□ -0.01
HDAC6-227ENST00000485102 SEPT1Q8WYJ6 367 aa14.99□□□□□ -0.01
HDAC6-227ENST00000485102 MAP4K1Q92918 833 aa14.99□□□□□ -0.01
HDAC6-227ENST00000485102 ZNF689Q96CS4 500 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-227ENST00000485102 RRP36Q96EU6 259 aaKnown RBP14.99□□□□□ -0.01
HDAC6-227ENST00000485102 C11orf84Q9BUA3 381 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-227ENST00000485102 TELO2Q9Y4R8 837 aa14.99□□□□□ -0.01
HDAC6-227ENST00000485102 SQORQ9Y6N5 450 aa14.99□□□□□ -0.01
HDAC6-227ENST00000485102 FAM86C2PA6NEL3 165 aa14.98□□□□□ -0.01
HDAC6-227ENST00000485102 H3BQ06 376 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-227ENST00000485102 ENPP3O14638 875 aa14.98□□□□□ -0.01
HDAC6-227ENST00000485102 SGSM2O43147 1006 aa14.98□□□□□ -0.01
HDAC6-227ENST00000485102 KCNA2P16389 499 aa14.98□□□□□ -0.01
HDAC6-227ENST00000485102 PDE4AP27815 886 aa14.98□□□□□ -0.01
HDAC6-227ENST00000485102 SSTR3P32745 418 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-227ENST00000485102 TCF7P36402 384 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-227ENST00000485102 GNAQP50148 359 aa14.98□□□□□ -0.01
HDAC6-227ENST00000485102 ZP2Q05996 745 aa14.98□□□□□ -0.01
HDAC6-227ENST00000485102 LPIN1Q14693 890 aa14.98□□□□□ -0.01
HDAC6-227ENST00000485102 UTP14CQ5TAP6 766 aaKnown RBP14.98□□□□□ -0.01
HDAC6-227ENST00000485102 RSPH3Q86UC2 560 aa14.98□□□□□ -0.01
HDAC6-227ENST00000485102 CRIPAKQ8N1N5 446 aa14.98□□□□□ -0.01
HDAC6-227ENST00000485102 CTCFLQ8NI51 663 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-227ENST00000485102 PLVAPQ9BX97 442 aa14.98□□□□□ -0.01
HDAC6-227ENST00000485102 KCNH6Q9H252 994 aa14.98□□□□□ -0.01
HDAC6-227ENST00000485102 ERAP1Q9NZ08 941 aa14.98□□□□□ -0.01
HDAC6-227ENST00000485102 TAF6LQ9Y6J9 622 aa14.98□□□□□ -0.01
HDAC6-227ENST00000485102 ADGRA3Q8IWK6 1321 aa14.97□□□□□ -0.01
HDAC6-227ENST00000485102 GSTTP1A0A1W2PQM5 241 aa14.97□□□□□ -0.01
HDAC6-227ENST00000485102 DCXO43602 365 aa14.97□□□□□ -0.01
HDAC6-227ENST00000485102 ATP9AO75110 1047 aa14.97□□□□□ -0.01
HDAC6-227ENST00000485102 NAALADL2Q58DX5 795 aa14.97□□□□□ -0.01
HDAC6-227ENST00000485102 FBXO47Q5MNV8 452 aa14.97□□□□□ -0.01
HDAC6-227ENST00000485102 MARCH8Q5T0T0 291 aa14.97□□□□□ -0.01
HDAC6-227ENST00000485102 ERICH6BQ5W0A0 696 aa14.97□□□□□ -0.01
HDAC6-227ENST00000485102 TEX2Q8IWB9 1127 aa14.97□□□□□ -0.01
HDAC6-227ENST00000485102 ADHFE1Q8IWW8 467 aa14.97□□□□□ -0.01
HDAC6-227ENST00000485102 ZNF654Q8IZM8 581 aa14.97□□□□□ -0.01
HDAC6-227ENST00000485102 SMARCAD1Q9H4L7 1026 aa14.97□□□□□ -0.01
HDAC6-227ENST00000485102 LY9Q9HBG7 655 aa14.97□□□□□ -0.01
HDAC6-227ENST00000485102 UBIAD1Q9Y5Z9 338 aa14.97□□□□□ -0.01
HDAC6-227ENST00000485102 ZNF318Q5VUA4 2279 aa14.97□□□□□ -0.01
HDAC6-227ENST00000485102 RRN3P2A6NIE6 340 aa14.96□□□□□ -0.01
HDAC6-227ENST00000485102 DGKIO75912 1065 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms