RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 ETV3LQ6ZN32 361 aa9.39□□□□□ -0.91
UBR3-210ENST00000484596 PPM1KQ8N3J5 372 aa9.39□□□□□ -0.91
UBR3-210ENST00000484596 FAM26EQ8N5C1 309 aa9.39□□□□□ -0.91
UBR3-210ENST00000484596 ZBTB8AQ96BR9 441 aa9.39□□□□□ -0.91
UBR3-210ENST00000484596 TEPSINQ96N21 525 aa9.39□□□□□ -0.91
UBR3-210ENST00000484596 SYT3Q9BQG1 590 aa9.39□□□□□ -0.91
UBR3-210ENST00000484596 EPB41L1Q9H4G0 881 aa9.39□□□□□ -0.91
UBR3-210ENST00000484596 PALD1Q9ULE6 856 aa9.39□□□□□ -0.91
UBR3-210ENST00000484596 TNPO3Q9Y5L0 923 aaKnown RBP9.39□□□□□ -0.91
UBR3-210ENST00000484596 MYCLP1P12525 358 aaPredicted RBP9.38□□□□□ -0.91
UBR3-210ENST00000484596 ST5P78524 1137 aa9.38□□□□□ -0.91
UBR3-210ENST00000484596 SPIRE1Q08AE8 756 aa9.38□□□□□ -0.91
UBR3-210ENST00000484596 C16orf59Q7L2K0 433 aa9.38□□□□□ -0.91
UBR3-210ENST00000484596 MILR1Q7Z6M3 343 aa9.38□□□□□ -0.91
UBR3-210ENST00000484596 CARFQ8N187 725 aa9.38□□□□□ -0.91
UBR3-210ENST00000484596 LINC00482Q8N8I6 264 aa9.38□□□□□ -0.91
UBR3-210ENST00000484596 PCDH19Q8TAB3 1148 aa9.38□□□□□ -0.91
UBR3-210ENST00000484596 DDX1Q92499 740 aaKnown RBP9.38□□□□□ -0.91
UBR3-210ENST00000484596 GORASP1Q9BQQ3 440 aa9.38□□□□□ -0.91
UBR3-210ENST00000484596 CDIP1Q9H305 208 aa9.38□□□□□ -0.91
UBR3-210ENST00000484596 IPPKQ9H8X2 491 aa9.38□□□□□ -0.91
UBR3-210ENST00000484596 MAPRE3Q9UPY8 281 aa9.38□□□□□ -0.91
UBR3-210ENST00000484596 MAFKO60675 156 aa9.37□□□□□ -0.91
UBR3-210ENST00000484596 POU3F2P20265 443 aaPredicted RBP9.37□□□□□ -0.91
UBR3-210ENST00000484596 SMAD4Q13485 552 aaKnown RBP9.37□□□□□ -0.91
UBR3-210ENST00000484596 NT5DC1Q5TFE4 455 aa9.37□□□□□ -0.91
UBR3-210ENST00000484596 ZCCHC8Q6NZY4 707 aaKnown RBP9.37□□□□□ -0.91
UBR3-210ENST00000484596 CNNM4Q6P4Q7 775 aa9.37□□□□□ -0.91
UBR3-210ENST00000484596 FILIP1Q7Z7B0 1213 aa9.37□□□□□ -0.91
UBR3-210ENST00000484596 MIB1Q86YT6 1006 aa9.37□□□□□ -0.91
UBR3-210ENST00000484596 NUB1Q9Y5A7 615 aa9.37□□□□□ -0.91
UBR3-210ENST00000484596 KRIT1O00522 736 aa9.36□□□□□ -0.91
UBR3-210ENST00000484596 PDE8AO60658 829 aa9.36□□□□□ -0.91
UBR3-210ENST00000484596 SRGAP2CP0DJJ0 459 aa9.36□□□□□ -0.91
UBR3-210ENST00000484596 CD300LDQ6UXZ3 194 aa9.36□□□□□ -0.91
UBR3-210ENST00000484596 ZCRB1Q8TBF4 217 aaKnown RBP9.36□□□□□ -0.91
UBR3-210ENST00000484596 CELF4Q9BZC1 486 aaKnown RBP9.36□□□□□ -0.91
UBR3-210ENST00000484596 A0A087X0B3 334 aa9.35□□□□□ -0.91
UBR3-210ENST00000484596 GNAT1P11488 350 aa9.35□□□□□ -0.91
UBR3-210ENST00000484596 CDK11BP21127 795 aaKnown RBP9.35□□□□□ -0.91
UBR3-210ENST00000484596 SOX5P35711 763 aa9.35□□□□□ -0.91
UBR3-210ENST00000484596 SARSP49591 514 aaKnown RBP9.35□□□□□ -0.91
UBR3-210ENST00000484596 NEK4P51957 841 aa9.35□□□□□ -0.91
UBR3-210ENST00000484596 CRY1Q16526 586 aa9.35□□□□□ -0.91
UBR3-210ENST00000484596 CFAP100Q494V2 611 aa9.35□□□□□ -0.91
UBR3-210ENST00000484596 KRT26Q7Z3Y9 468 aa9.35□□□□□ -0.91
UBR3-210ENST00000484596 CHAC2Q8WUX2 184 aa9.35□□□□□ -0.91
UBR3-210ENST00000484596 C11orf84Q9BUA3 381 aaPredicted RBP9.35□□□□□ -0.91
UBR3-210ENST00000484596 JAM3Q9BX67 310 aa9.35□□□□□ -0.91
UBR3-210ENST00000484596 CAAP1Q9H8G2 361 aa9.35□□□□□ -0.91
UBR3-210ENST00000484596 CATSPERZQ9NTU4 200 aa9.35□□□□□ -0.91
UBR3-210ENST00000484596 IFT57Q9NWB7 429 aa9.35□□□□□ -0.91
UBR3-210ENST00000484596 NTMQ9P121 344 aa9.35□□□□□ -0.91
UBR3-210ENST00000484596 PPARGC1AQ9UBK2 798 aaKnown RBP9.35□□□□□ -0.91
UBR3-210ENST00000484596 PPM1GO15355 546 aaPredicted RBP9.34□□□□□ -0.91
UBR3-210ENST00000484596 PRICKLE3O43900 615 aaPredicted RBP9.34□□□□□ -0.91
UBR3-210ENST00000484596 VIL1P09327 827 aaKnown RBP9.34□□□□□ -0.91
UBR3-210ENST00000484596 JMJD7P0C870 316 aa9.34□□□□□ -0.91
UBR3-210ENST00000484596 KCNA6P17658 529 aa9.34□□□□□ -0.91
UBR3-210ENST00000484596 SKOR2Q2VWA4 1001 aaPredicted RBP9.34□□□□□ -0.91
UBR3-210ENST00000484596 TTLL7Q6ZT98 887 aa9.34□□□□□ -0.91
UBR3-210ENST00000484596 THNSL2Q86YJ6 484 aa9.34□□□□□ -0.91
UBR3-210ENST00000484596 WNK4Q96J92 1243 aa9.34□□□□□ -0.91
UBR3-210ENST00000484596 KCNJ15Q99712 375 aa9.34□□□□□ -0.91
UBR3-210ENST00000484596 TARS2Q9BW92 718 aaKnown RBP9.34□□□□□ -0.91
UBR3-210ENST00000484596 USP40Q9NVE5 1235 aa9.34□□□□□ -0.91
UBR3-210ENST00000484596 SAMD15Q9P1V8 674 aa9.34□□□□□ -0.91
UBR3-210ENST00000484596 CCDC66A2RUB6 948 aa9.33□□□□□ -0.92
UBR3-210ENST00000484596 CKMP06732 381 aa9.33□□□□□ -0.92
UBR3-210ENST00000484596 STAT3P40763 770 aa9.33□□□□□ -0.92
UBR3-210ENST00000484596 ZNF460Q14592 562 aa9.33□□□□□ -0.92
UBR3-210ENST00000484596 CDCA2Q69YH5 1023 aaPredicted RBP9.33□□□□□ -0.92
UBR3-210ENST00000484596 CYP4F22Q6NT55 531 aa9.33□□□□□ -0.92
UBR3-210ENST00000484596 OTOP3Q7RTS5 596 aa9.33□□□□□ -0.92
UBR3-210ENST00000484596 STK32CQ86UX6 486 aa9.33□□□□□ -0.92
UBR3-210ENST00000484596 KIF18BQ86Y91 864 aa9.33□□□□□ -0.92
UBR3-210ENST00000484596 FAM126BQ8IXS8 530 aa9.33□□□□□ -0.92
UBR3-210ENST00000484596 ORAI3Q9BRQ5 295 aa9.33□□□□□ -0.92
UBR3-210ENST00000484596 PCDH18Q9HCL0 1135 aa9.33□□□□□ -0.92
UBR3-210ENST00000484596 SLC6A20Q9NP91 592 aa9.33□□□□□ -0.92
UBR3-210ENST00000484596 NISCHQ9Y2I1 1504 aa9.32□□□□□ -0.92
UBR3-210ENST00000484596 GSG1L2A8MUP6 293 aa9.32□□□□□ -0.92
UBR3-210ENST00000484596 NOBOXO60393 691 aa9.32□□□□□ -0.92
UBR3-210ENST00000484596 CELA3BP08861 270 aa9.32□□□□□ -0.92
UBR3-210ENST00000484596 PYGMP11217 842 aa9.32□□□□□ -0.92
UBR3-210ENST00000484596 IBSPP21815 317 aaPredicted RBP9.32□□□□□ -0.92
UBR3-210ENST00000484596 STAT5AP42229 794 aa9.32□□□□□ -0.92
UBR3-210ENST00000484596 DNM2P50570 870 aa9.32□□□□□ -0.92
UBR3-210ENST00000484596 RTP5Q14D33 572 aa9.32□□□□□ -0.92
UBR3-210ENST00000484596 PIK3R6Q5UE93 754 aa9.32□□□□□ -0.92
UBR3-210ENST00000484596 ZC3H18Q86VM9 953 aaKnown RBP9.32□□□□□ -0.92
UBR3-210ENST00000484596 IGSF22Q8N9C0 903 aa9.32□□□□□ -0.92
UBR3-210ENST00000484596 KYQ8NBH2 561 aa9.32□□□□□ -0.92
UBR3-210ENST00000484596 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.32□□□□□ -0.92
UBR3-210ENST00000484596 CABP5Q9NP86 173 aa9.32□□□□□ -0.92
UBR3-210ENST00000484596 ZNF652Q9Y2D9 606 aa9.32□□□□□ -0.92
UBR3-210ENST00000484596 COQ6Q9Y2Z9 468 aa9.32□□□□□ -0.92
UBR3-210ENST00000484596 HGSO14964 777 aaPredicted RBP9.31□□□□□ -0.92
UBR3-210ENST00000484596 THBS2P35442 1172 aa9.31□□□□□ -0.92
UBR3-210ENST00000484596 GPR19Q15760 415 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms