RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 ARHGAP4P98171 946 aa32.5■■■□□ 2.79
HLA-C-207ENST00000484378 ZNF713Q8N859 430 aaPredicted RBP32.5■■■□□ 2.79
HLA-C-207ENST00000484378 LMBR1Q8WVP7 490 aa32.5■■■□□ 2.79
HLA-C-207ENST00000484378 ARNTL2Q8WYA1 636 aa32.5■■■□□ 2.79
HLA-C-207ENST00000484378 JAKMIP1Q96N16 626 aaKnown RBP32.5■■■□□ 2.79
HLA-C-207ENST00000484378 RBAK-RBAKDNI3L0D1 243 aa32.49■■■□□ 2.79
HLA-C-207ENST00000484378 STXBP3O00186 592 aa32.49■■■□□ 2.79
HLA-C-207ENST00000484378 CPA1P15085 419 aa32.49■■■□□ 2.79
HLA-C-207ENST00000484378 TEX2Q8IWB9 1127 aa32.49■■■□□ 2.79
HLA-C-207ENST00000484378 SEPT1Q8WYJ6 367 aa32.49■■■□□ 2.79
HLA-C-207ENST00000484378 THEGQ9P2T0 379 aa32.49■■■□□ 2.79
HLA-C-207ENST00000484378 RFXAPO00287 272 aa32.48■■■□□ 2.79
HLA-C-207ENST00000484378 MAFGO15525 162 aa32.48■■■□□ 2.79
HLA-C-207ENST00000484378 CDC27P30260 824 aa32.48■■■□□ 2.79
HLA-C-207ENST00000484378 METAP2P50579 478 aaKnown RBP eCLIP32.48■■■□□ 2.79
HLA-C-207ENST00000484378 DBF4BQ8NFT6 615 aa32.48■■■□□ 2.79
HLA-C-207ENST00000484378 KCNB2Q92953 911 aa32.48■■■□□ 2.79
HLA-C-207ENST00000484378 PGBD1Q96JS3 809 aa32.48■■■□□ 2.79
HLA-C-207ENST00000484378 FAM217BQ9NTX9 383 aaPredicted RBP32.48■■■□□ 2.79
HLA-C-207ENST00000484378 BARHL2Q9NY43 387 aa32.48■■■□□ 2.79
HLA-C-207ENST00000484378 REV3LO60673 3130 aa32.48■■■□□ 2.79
HLA-C-207ENST00000484378 NRCAMQ92823 1304 aa32.48■■■□□ 2.79
HLA-C-207ENST00000484378 LCHNA4D1U4 455 aa32.47■■■□□ 2.79
HLA-C-207ENST00000484378 GTPBP6O43824 516 aaPredicted RBP32.47■■■□□ 2.79
HLA-C-207ENST00000484378 GJB5O95377 273 aa32.47■■■□□ 2.79
HLA-C-207ENST00000484378 FOSP01100 380 aaPredicted RBP32.47■■■□□ 2.79
HLA-C-207ENST00000484378 HSPA4P34932 840 aa32.47■■■□□ 2.79
HLA-C-207ENST00000484378 TJAP1Q5JTD0 557 aa32.47■■■□□ 2.79
HLA-C-207ENST00000484378 SYMPKQ92797 1274 aaKnown RBP32.47■■■□□ 2.79
HLA-C-207ENST00000484378 SNX14Q9Y5W7 946 aa32.47■■■□□ 2.79
HLA-C-207ENST00000484378 GSTTP1A0A1W2PQM5 241 aa32.46■■■□□ 2.79
HLA-C-207ENST00000484378 EPOPA6NHQ4 379 aa32.46■■■□□ 2.79
HLA-C-207ENST00000484378 MARK3P27448 753 aa32.46■■■□□ 2.79
HLA-C-207ENST00000484378 APOBRQ0VD83 1088 aa32.46■■■□□ 2.79
HLA-C-207ENST00000484378 BLOC1S2Q6QNY1 142 aa32.46■■■□□ 2.79
HLA-C-207ENST00000484378 Q6ZUG5 572 aa32.46■■■□□ 2.79
HLA-C-207ENST00000484378 GLG1Q92896 1179 aa32.46■■■□□ 2.79
HLA-C-207ENST00000484378 MXRA8Q9BRK3 442 aa32.46■■■□□ 2.79
HLA-C-207ENST00000484378 ANO3Q9BYT9 981 aa32.46■■■□□ 2.79
HLA-C-207ENST00000484378 GLT8D2Q9H1C3 349 aa32.46■■■□□ 2.79
HLA-C-207ENST00000484378 JPH1Q9HDC5 661 aaPredicted RBP32.46■■■□□ 2.79
HLA-C-207ENST00000484378 ERAP1Q9NZ08 941 aa32.46■■■□□ 2.79
HLA-C-207ENST00000484378 CCDC196A0A1B0GTZ2 297 aa32.45■■■□□ 2.79
HLA-C-207ENST00000484378 SMCO2A6NFE2 343 aa32.45■■■□□ 2.79
HLA-C-207ENST00000484378 ADAM17P78536 824 aa32.45■■■□□ 2.79
HLA-C-207ENST00000484378 PLEKHG4Q58EX7 1191 aa32.45■■■□□ 2.79
HLA-C-207ENST00000484378 FAM117BQ6P1L5 589 aa32.45■■■□□ 2.79
HLA-C-207ENST00000484378 BRF1Q92994 677 aa32.45■■■□□ 2.79
HLA-C-207ENST00000484378 RAD9AQ99638 391 aa32.45■■■□□ 2.79
HLA-C-207ENST00000484378 KCNH7Q9NS40 1196 aa32.45■■■□□ 2.79
HLA-C-207ENST00000484378 MICAL3Q7RTP6 2002 aa32.44■■■□□ 2.78
HLA-C-207ENST00000484378 REC8O95072 547 aa32.44■■■□□ 2.78
HLA-C-207ENST00000484378 ADD1P35611 737 aaKnown RBP32.44■■■□□ 2.78
HLA-C-207ENST00000484378 PPFIA1Q13136 1202 aa32.44■■■□□ 2.78
HLA-C-207ENST00000484378 AP3B2Q13367 1082 aa32.44■■■□□ 2.78
HLA-C-207ENST00000484378 ATXN2LQ8WWM7 1075 aaKnown RBP32.44■■■□□ 2.78
HLA-C-207ENST00000484378 SEPT8Q92599 483 aa32.44■■■□□ 2.78
HLA-C-207ENST00000484378 KAT6AQ92794 2004 aa32.44■■■□□ 2.78
HLA-C-207ENST00000484378 TTC28Q96AY4 2481 aa32.43■■■□□ 2.78
HLA-C-207ENST00000484378 AMHP03971 560 aa32.43■■■□□ 2.78
HLA-C-207ENST00000484378 LIN28BQ6ZN17 250 aaKnown RBP eCLIP32.43■■■□□ 2.785e-7■■■■□ 21.8
HLA-C-207ENST00000484378 SPRED2Q7Z698 418 aa32.43■■■□□ 2.78
HLA-C-207ENST00000484378 MYOCDQ8IZQ8 938 aa32.43■■■□□ 2.78
HLA-C-207ENST00000484378 CYP2W1Q8TAV3 490 aa32.43■■■□□ 2.78
HLA-C-207ENST00000484378 TSPYL2Q9H2G4 693 aaPredicted RBP32.43■■■□□ 2.78
HLA-C-207ENST00000484378 SMARCAD1Q9H4L7 1026 aa32.43■■■□□ 2.78
HLA-C-207ENST00000484378 TMEM260Q9NX78 707 aa32.43■■■□□ 2.78
HLA-C-207ENST00000484378 SLC9A2Q9UBY0 812 aa32.43■■■□□ 2.78
HLA-C-207ENST00000484378 MTCH2Q9Y6C9 303 aa32.43■■■□□ 2.78
HLA-C-207ENST00000484378 SDF4Q9BRK5 362 aa32.42■■■□□ 2.78
HLA-C-207ENST00000484378 COL4A4P53420 1690 aaPredicted RBP32.42■■■□□ 2.78
HLA-C-207ENST00000484378 POU3F3P20264 500 aaPredicted RBP32.41■■■□□ 2.78
HLA-C-207ENST00000484378 SREBF1P36956 1147 aa32.41■■■□□ 2.78
HLA-C-207ENST00000484378 MKRN4PQ13434 485 aaPredicted RBP32.41■■■□□ 2.78
HLA-C-207ENST00000484378 GRIK4Q16099 956 aa32.41■■■□□ 2.78
HLA-C-207ENST00000484378 PFKFB3Q16875 520 aaPredicted RBP32.41■■■□□ 2.78
HLA-C-207ENST00000484378 CEP55Q53EZ4 464 aa32.41■■■□□ 2.78
HLA-C-207ENST00000484378 TAF2Q6P1X5 1199 aa32.41■■■□□ 2.78
HLA-C-207ENST00000484378 TUBE1Q9UJT0 475 aa32.41■■■□□ 2.78
HLA-C-207ENST00000484378 PRRC2BQ5JSZ5 2229 aaKnown RBP32.41■■■□□ 2.78
HLA-C-207ENST00000484378 SCG2P13521 617 aa32.4■■■□□ 2.78
HLA-C-207ENST00000484378 RPS6KB1P23443 525 aa32.4■■■□□ 2.78
HLA-C-207ENST00000484378 CLK2P49760 499 aaKnown RBP32.4■■■□□ 2.78
HLA-C-207ENST00000484378 SKIV2LQ15477 1246 aaKnown RBP32.4■■■□□ 2.78
HLA-C-207ENST00000484378 RUFY4Q6ZNE9 571 aa32.4■■■□□ 2.78
HLA-C-207ENST00000484378 OSBPL7Q9BZF2 842 aa32.4■■■□□ 2.78
HLA-C-207ENST00000484378 AZI2Q9H6S1 392 aa32.4■■■□□ 2.78
HLA-C-207ENST00000484378 NFASCO94856 1347 aa32.4■■■□□ 2.78
HLA-C-207ENST00000484378 NID2Q14112 1375 aa32.4■■■□□ 2.78
HLA-C-207ENST00000484378 ARP10275 920 aa32.39■■■□□ 2.78
HLA-C-207ENST00000484378 GRB10Q13322 594 aa32.39■■■□□ 2.78
HLA-C-207ENST00000484378 FAM26DQ5JW98 314 aa32.39■■■□□ 2.78
HLA-C-207ENST00000484378 MTUS1Q9ULD2 1270 aa32.39■■■□□ 2.78
HLA-C-207ENST00000484378 XIRP2A4UGR9 3374 aa32.39■■■□□ 2.78
HLA-C-207ENST00000484378 PSMA5P28066 241 aa32.38■■■□□ 2.77
HLA-C-207ENST00000484378 ZNF76P36508 570 aa32.38■■■□□ 2.77
HLA-C-207ENST00000484378 MRPS5P82675 430 aaKnown RBP32.38■■■□□ 2.77
HLA-C-207ENST00000484378 KRT40Q6A162 431 aa32.38■■■□□ 2.77
HLA-C-207ENST00000484378 RSPH3Q86UC2 560 aa32.38■■■□□ 2.77
HLA-C-207ENST00000484378 ASB2Q96Q27 587 aa32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms