RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 C17orf99Q6UX52 265 aa11.31□□□□□ -0.6
HDAC6-226ENST00000483656 SV2BQ7L1I2 683 aa11.31□□□□□ -0.6
HDAC6-226ENST00000483656 LUZP1Q86V48 1076 aa11.31□□□□□ -0.6
HDAC6-226ENST00000483656 DHX40Q8IX18 779 aaKnown RBP11.31□□□□□ -0.6
HDAC6-226ENST00000483656 TRIML1Q8N9V2 468 aa11.31□□□□□ -0.6
HDAC6-226ENST00000483656 NT5C3AQ9H0P0 336 aa11.31□□□□□ -0.6
HDAC6-226ENST00000483656 TUFT1Q9NNX1 390 aa11.31□□□□□ -0.6
HDAC6-226ENST00000483656 WRAP73Q9P2S5 460 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-226ENST00000483656 LRRC37A2A6NM11 1700 aa11.31□□□□□ -0.6
HDAC6-226ENST00000483656 NFASCO94856 1347 aa11.31□□□□□ -0.6
HDAC6-226ENST00000483656 ZNFX1Q9P2E3 1918 aaKnown RBP11.31□□□□□ -0.6
HDAC6-226ENST00000483656 AP5Z1O43299 807 aa11.3□□□□□ -0.6
HDAC6-226ENST00000483656 CAVIN2O95810 425 aa11.3□□□□□ -0.6
HDAC6-226ENST00000483656 PLA2G4BP0C869 781 aa11.3□□□□□ -0.6
HDAC6-226ENST00000483656 CD44P16070 742 aaKnown RBP11.3□□□□□ -0.6
HDAC6-226ENST00000483656 ADORA2AP29274 412 aa11.3□□□□□ -0.6
HDAC6-226ENST00000483656 SLC12A3P55017 1021 aa11.3□□□□□ -0.6
HDAC6-226ENST00000483656 KCNB1Q14721 858 aa11.3□□□□□ -0.6
HDAC6-226ENST00000483656 TAF1CQ15572 869 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-226ENST00000483656 KMT5BQ4FZB7 885 aa11.3□□□□□ -0.6
HDAC6-226ENST00000483656 ARSHQ5FYA8 562 aa11.3□□□□□ -0.6
HDAC6-226ENST00000483656 CYP4F22Q6NT55 531 aa11.3□□□□□ -0.6
HDAC6-226ENST00000483656 MIER3Q7Z3K6 550 aa11.3□□□□□ -0.6
HDAC6-226ENST00000483656 GPR142Q7Z601 462 aa11.3□□□□□ -0.6
HDAC6-226ENST00000483656 ABRAQ8N0Z2 381 aa11.3□□□□□ -0.6
HDAC6-226ENST00000483656 DNAJC19Q96DA6 116 aa11.3□□□□□ -0.6
HDAC6-226ENST00000483656 MED15Q96RN5 788 aa11.3□□□□□ -0.6
HDAC6-226ENST00000483656 SENP7Q9BQF6 1050 aa11.3□□□□□ -0.6
HDAC6-226ENST00000483656 BPIFA3Q9BQP9 254 aa11.3□□□□□ -0.6
HDAC6-226ENST00000483656 PPP1R3GB7ZBB8 358 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 ZBTB39O15060 712 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 STRNO43815 780 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 EYA4O95677 639 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 CYP11B2P19099 503 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 MUTP22033 750 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 AMPD3Q01432 767 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 KRT76Q01546 638 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 PDE4DQ08499 809 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 GRB14Q14449 540 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 NCAPHQ15003 741 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 GNPTABQ3T906 1256 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 SEPT14Q6ZU15 432 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 PLEKHH3Q7Z736 793 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 TPH2Q8IWU9 490 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 SMYD4Q8IYR2 804 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-226ENST00000483656 KCTD17Q8N5Z5 321 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 SYT2Q8N9I0 419 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-226ENST00000483656 MLKLQ8NB16 471 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 CDHR1Q96JP9 859 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 DNM3Q9UQ16 869 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 PLXNB2O15031 1838 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 KIAA1217Q5T5P2 1943 aa11.29□□□□□ -0.6
HDAC6-226ENST00000483656 LOC102724159A0A0B4J2E5 919 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 NPHP3-ACAD11A0A0J9YXS1 232 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 TLR2O60603 784 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 RHOBTB3O94955 611 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 LYPLA2O95372 231 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 ARIH2O95376 493 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 P4HBP07237 508 aaKnown RBP11.28□□□□□ -0.6
HDAC6-226ENST00000483656 MAPK4P31152 587 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 ASIC1P78348 528 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 EHHADHQ08426 723 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 SREBF2Q12772 1141 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 PWP2Q15269 919 aaKnown RBP11.28□□□□□ -0.6
HDAC6-226ENST00000483656 UGCGQ16739 394 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 ZNF658Q5TYW1 1059 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-226ENST00000483656 ZNF746Q6NUN9 644 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-226ENST00000483656 EEPD1Q7L9B9 569 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 DYMQ7RTS9 669 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 AOPEPQ8N6M6 819 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 BANK1Q8NDB2 785 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 NEK9Q8TD19 979 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 PIGOQ8TEQ8 1089 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 DDX12PQ92771 950 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 LXNQ9BS40 222 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 RMND1Q9NWS8 449 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 GDAQ9Y2T3 454 aa11.28□□□□□ -0.6
HDAC6-226ENST00000483656 PVALEFA0A1B0GWK0 134 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 SLC15A5A6NIM6 579 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 RASSF10A6NK89 507 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 WDR64B1ANS9 1081 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 B4DLN1 442 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 SORBS3O60504 671 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 AOC2O75106 756 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 STBD1O95210 358 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 SSBP05455 408 aaKnown RBP eCLIP11.27□□□□□ -0.61
HDAC6-226ENST00000483656 UBA1P22314 1058 aaKnown RBP11.27□□□□□ -0.61
HDAC6-226ENST00000483656 SFNP31947 248 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 JAK3P52333 1124 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 CRHR2Q13324 411 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 MORN1Q5T089 497 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 TMEM63BQ5T3F8 832 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 CCDC62Q6P9F0 684 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 ABHD15Q6UXT9 468 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 UNC13DQ70J99 1090 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 ZNF467Q7Z7K2 595 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-226ENST00000483656 GPBP1Q86WP2 473 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 GIMAP8Q8ND71 665 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-226ENST00000483656 RDM1Q8NG50 284 aa11.27□□□□□ -0.61
HDAC6-226ENST00000483656 NPLOC4Q8TAT6 608 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms