RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 GMCL1P1Q8NEA9 526 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 OSBP2Q969R2 916 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 MKL1Q969V6 931 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 TIFAQ96CG3 184 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 CEP95Q96GE4 821 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 MTIF3Q9H2K0 278 aaKnown RBP6.96□□□□□ -1.3
CSDE1-207ENST00000483407 ZNF576Q9H609 170 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 SLC38A10Q9HBR0 1119 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 AAASQ9NRG9 546 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 MTMR4Q9NYA4 1195 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 DMGDHQ9UI17 866 aaKnown RBP6.96□□□□□ -1.3
CSDE1-207ENST00000483407 RCAN3Q9UKA8 241 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 TBX21Q9UL17 535 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 FRMPD3Q5JV73 1810 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 IGKV6D-41A0A0C4DH26 115 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 MYADML2A6NDP7 307 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 ASB14A6NK59 587 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 ERC2O15083 957 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 ZEB2O60315 1214 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 PRDM1O75626 825 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 CABYRO75952 493 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 MICAL2O94851 1124 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 AVPP01185 164 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 BMP2P12643 396 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 BMP3P12645 472 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 CDK7P50613 346 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 STAT2P52630 851 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 GJA9P57773 515 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 POU4F2Q12837 409 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 GRIN2CQ14957 1233 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 TKFCQ3LXA3 575 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 DIEXFQ68CQ4 756 aaKnown RBP6.95□□□□□ -1.3
CSDE1-207ENST00000483407 MRPL14Q6P1L8 145 aaKnown RBP6.95□□□□□ -1.3
CSDE1-207ENST00000483407 PSRC1Q6PGN9 363 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-207ENST00000483407 LYSMD3Q7Z3D4 306 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 FAM160B2Q86V87 743 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 CCDC144CPQ8IYA2 1237 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 LRRC47Q8N1G4 583 aaKnown RBP6.95□□□□□ -1.3
CSDE1-207ENST00000483407 NEDD1Q8NHV4 660 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 CHURC1Q8WUH1 139 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 SUSD3Q96L08 255 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 GAS2L1Q99501 681 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-207ENST00000483407 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.95□□□□□ -1.3
CSDE1-207ENST00000483407 NIF3L1Q9GZT8 377 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 UPF3AQ9H1J1 476 aaKnown RBP6.95□□□□□ -1.3
CSDE1-207ENST00000483407 ACAD9Q9H845 621 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 HOMER2Q9NSB8 354 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 FAM13BQ9NYF5 915 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 RLFQ13129 1914 aa6.95□□□□□ -1.3
CSDE1-207ENST00000483407 LTBP2Q14767 1821 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 LAMA2P24043 3122 aaKnown RBP6.94□□□□□ -1.3
CSDE1-207ENST00000483407 FAM187AA6NFU0 413 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 TMEM232C9JQI7 657 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 OPLAHO14841 1288 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 PRPF40AO75400 957 aaKnown RBP6.94□□□□□ -1.3
CSDE1-207ENST00000483407 RPLP1P05386 114 aaKnown RBP6.94□□□□□ -1.3
CSDE1-207ENST00000483407 CSF2RAP15509 400 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 ATP4AP20648 1035 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 SLC1A4P43007 532 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 MAPK8P45983 427 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 PHKA2P46019 1235 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 TFAP4Q01664 338 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 TNFAIP2Q03169 654 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 PPARAQ07869 468 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 NFX1Q12986 1120 aaKnown RBP6.94□□□□□ -1.3
CSDE1-207ENST00000483407 MRPL58Q14197 206 aaKnown RBP6.94□□□□□ -1.3
CSDE1-207ENST00000483407 RAB30Q15771 203 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 TMEM240Q5SV17 173 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 PRICKLE2Q7Z3G6 844 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 TLK2Q86UE8 772 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 FAM126BQ8IXS8 530 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 IFNL3Q8IZI9 196 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 GPR152Q8TDT2 470 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 STAG1Q8WVM7 1258 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 GMCL1Q96IK5 515 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 FGD4Q96M96 766 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 SEZ6LQ9BYH1 1024 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 AP5M1Q9H0R1 490 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 NAPBQ9H115 298 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 DCTPP1Q9H773 170 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 EPB41L4AQ9HCS5 686 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-207ENST00000483407 RNF146Q9NTX7 359 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 MSRAQ9UJ68 235 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 PLIN4Q96Q06 1357 aa6.94□□□□□ -1.3
CSDE1-207ENST00000483407 TSPY2A6NKD2 308 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 M0R2C6 588 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 ADCY6O43306 1168 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 PLA2G6O60733 806 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 FGBP02675 491 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 ACRP10323 421 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 ALAS1P13196 640 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 PCSK2P16519 638 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 MCCP23508 829 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 NKX3-2P78367 333 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 CNTN2Q02246 1040 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 ENOX2Q16206 610 aaKnown RBP6.93□□□□□ -1.3
CSDE1-207ENST00000483407 FSCN1Q16658 493 aaKnown RBP6.93□□□□□ -1.3
CSDE1-207ENST00000483407 AKNAD1Q5T1N1 836 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 C6orf118Q5T5N4 469 aa6.93□□□□□ -1.3
CSDE1-207ENST00000483407 TSHZ3Q63HK5 1081 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms