RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 CERKLQ49MI3 558 aaPredicted RBP7.96□□□□□ -1.14
CHD6-209ENST00000482596 SNRNP48Q6IEG0 339 aaKnown RBP7.96□□□□□ -1.14
CHD6-209ENST00000482596 TSSK4Q6SA08 328 aa7.96□□□□□ -1.14
CHD6-209ENST00000482596 ATG9AQ7Z3C6 839 aa7.96□□□□□ -1.14
CHD6-209ENST00000482596 ZNF605Q86T29 641 aa7.96□□□□□ -1.14
CHD6-209ENST00000482596 NSUN4Q96CB9 384 aaKnown RBP7.96□□□□□ -1.14
CHD6-209ENST00000482596 REPIN1Q9BWE0 567 aaKnown RBP7.96□□□□□ -1.14
CHD6-209ENST00000482596 PCGF6Q9BYE7 350 aa7.96□□□□□ -1.14
CHD6-209ENST00000482596 FOXQ1Q9C009 403 aa7.96□□□□□ -1.14
CHD6-209ENST00000482596 SLC6A16Q9GZN6 736 aa7.96□□□□□ -1.14
CHD6-209ENST00000482596 RC3H2Q9HBD1 1191 aaKnown RBP7.96□□□□□ -1.14
CHD6-209ENST00000482596 Q9Y3F1 56 aa7.96□□□□□ -1.14
CHD6-209ENST00000482596 SIT1Q9Y3P8 196 aa7.96□□□□□ -1.14
CHD6-209ENST00000482596 ADGRA3Q8IWK6 1321 aa7.96□□□□□ -1.14
CHD6-209ENST00000482596 FBN2P35556 2912 aa7.96□□□□□ -1.14
CHD6-209ENST00000482596 PYCARD-AS1I3L0S3 204 aa7.95□□□□□ -1.14
CHD6-209ENST00000482596 J3QKU1 62 aa7.95□□□□□ -1.14
CHD6-209ENST00000482596 ZNF853P0CG23 659 aa7.95□□□□□ -1.14
CHD6-209ENST00000482596 PLCD1P51178 756 aa7.95□□□□□ -1.14
CHD6-209ENST00000482596 CSRP2Q16527 193 aa7.95□□□□□ -1.14
CHD6-209ENST00000482596 AMHR2Q16671 573 aa7.95□□□□□ -1.14
CHD6-209ENST00000482596 PROSER1Q86XN7 944 aa7.95□□□□□ -1.14
CHD6-209ENST00000482596 CLEC10AQ8IUN9 316 aa7.95□□□□□ -1.14
CHD6-209ENST00000482596 KLHL23Q8NBE8 558 aa7.95□□□□□ -1.14
CHD6-209ENST00000482596 FEZF2Q8TBJ5 459 aa7.95□□□□□ -1.14
CHD6-209ENST00000482596 BORCS6Q96GS4 357 aa7.95□□□□□ -1.14
CHD6-209ENST00000482596 LRIG1Q96JA1 1093 aa7.95□□□□□ -1.14
CHD6-209ENST00000482596 PNNQ9H307 717 aaKnown RBP7.95□□□□□ -1.14
CHD6-209ENST00000482596 GNL3LQ9NVN8 582 aaKnown RBP7.95□□□□□ -1.14
CHD6-209ENST00000482596 ZSCAN32Q9NX65 697 aa7.95□□□□□ -1.14
CHD6-209ENST00000482596 FBXO4Q9UKT5 387 aa7.95□□□□□ -1.14
CHD6-209ENST00000482596 RWDD3Q9Y3V2 267 aa7.95□□□□□ -1.14
CHD6-209ENST00000482596 V9GY48 417 aaPredicted RBP7.95□□□□□ -1.14
CHD6-209ENST00000482596 MYH7BA7E2Y1 1941 aa7.95□□□□□ -1.14
CHD6-209ENST00000482596 C2CD3Q4AC94 2353 aa7.95□□□□□ -1.14
CHD6-209ENST00000482596 F6X3S4 739 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 GRM8O00222 908 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 LAMTOR5O43504 91 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 LRP3O75074 770 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 CAPNS1P04632 268 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 HLA-DOAP06340 250 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 MMP3P08254 477 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 ADORA1P30542 326 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 COPB2P35606 906 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 USP46P62068 366 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 FLIIQ13045 1269 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 TRIM71Q2Q1W2 868 aaKnown RBP7.94□□□□□ -1.14
CHD6-209ENST00000482596 PLEKHG4Q58EX7 1191 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 BEND3Q5T5X7 828 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 SPTY2D1Q68D10 685 aaPredicted RBP7.94□□□□□ -1.14
CHD6-209ENST00000482596 IQSEC1Q6DN90 963 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 LAIR1Q6GTX8 287 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 TMEM184AQ6ZMB5 413 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 TBC1D9Q6ZT07 1266 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 ANKRD35Q8N283 1001 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 HNRNPLLQ8WVV9 542 aaKnown RBP7.94□□□□□ -1.14
CHD6-209ENST00000482596 NELL1Q92832 810 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 P2RX5Q93086 422 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 THAP11Q96EK4 314 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 PLVAPQ9BX97 442 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 KCNK12Q9HB15 430 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 CABP5Q9NP86 173 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 SPATA6Q9NWH7 488 aaPredicted RBP7.94□□□□□ -1.14
CHD6-209ENST00000482596 AATFQ9NY61 560 aaKnown RBP eCLIP7.94□□□□□ -1.14
CHD6-209ENST00000482596 SALL2Q9Y467 1007 aaPredicted RBP7.94□□□□□ -1.14
CHD6-209ENST00000482596 NBPF19A0A087WUL8 3843 aa7.94□□□□□ -1.14
CHD6-209ENST00000482596 LCTP09848 1927 aa7.93□□□□□ -1.14
CHD6-209ENST00000482596 GREB1Q4ZG55 1949 aa7.93□□□□□ -1.14
CHD6-209ENST00000482596 TRIM66O15016 1216 aa7.93□□□□□ -1.14
CHD6-209ENST00000482596 PPFIA3O75145 1194 aa7.93□□□□□ -1.14
CHD6-209ENST00000482596 LDHCP07864 332 aa7.93□□□□□ -1.14
CHD6-209ENST00000482596 RETP07949 1114 aa7.93□□□□□ -1.14
CHD6-209ENST00000482596 SHMT1P34896 483 aa7.93□□□□□ -1.14
CHD6-209ENST00000482596 LIMK1P53667 647 aa7.93□□□□□ -1.14
CHD6-209ENST00000482596 ZNF252P-AS1Q0IIN9 211 aa7.93□□□□□ -1.14
CHD6-209ENST00000482596 FKBP5Q13451 457 aaPredicted RBP7.93□□□□□ -1.14
CHD6-209ENST00000482596 CCDC102BQ68D86 513 aa7.93□□□□□ -1.14
CHD6-209ENST00000482596 KANK3Q6NY19 840 aa7.93□□□□□ -1.14
CHD6-209ENST00000482596 KIAA1211Q6ZU35 1233 aa7.93□□□□□ -1.14
CHD6-209ENST00000482596 MICAL1Q8TDZ2 1067 aa7.93□□□□□ -1.14
CHD6-209ENST00000482596 STK31Q9BXU1 1019 aa7.93□□□□□ -1.14
CHD6-209ENST00000482596 BICC1Q9H694 974 aaKnown RBP7.93□□□□□ -1.14
CHD6-209ENST00000482596 CYP26B1Q9NR63 512 aa7.93□□□□□ -1.14
CHD6-209ENST00000482596 WNT16Q9UBV4 365 aa7.93□□□□□ -1.14
CHD6-209ENST00000482596 PPP1R9AQ9ULJ8 1098 aa7.93□□□□□ -1.14
CHD6-209ENST00000482596 MRPL42Q9Y6G3 142 aaKnown RBP7.93□□□□□ -1.14
CHD6-209ENST00000482596 EOMESO95936 686 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 CPT1AP50416 773 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 ERVFC1P60507 584 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 TROAPQ12815 778 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 BTG3Q14201 252 aaPredicted RBP7.92□□□□□ -1.14
CHD6-209ENST00000482596 SF3A2Q15428 464 aaKnown RBP7.92□□□□□ -1.14
CHD6-209ENST00000482596 ATP2B3Q16720 1220 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 DUSP28Q4G0W2 176 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 AASDHQ4L235 1098 aaPredicted RBP7.92□□□□□ -1.14
CHD6-209ENST00000482596 PHLDB3Q6NSJ2 640 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 KIAA1211LQ6NV74 962 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 BRICD5Q6PL45 260 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 PI16Q6UXB8 463 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 SIAH1Q8IUQ4 282 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms