RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 RTEL1Q9NZ71 1219 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 DENND2AQ9ULE3 1009 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 NID2Q14112 1375 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 ZNF804BA4D1E1 1349 aa8.83□□□□□ -1
SNX13-208ENST00000482558 STK36Q9NRP7 1315 aa8.83□□□□□ -1
SNX13-208ENST00000482558 DOCK2Q92608 1830 aa8.83□□□□□ -1
SNX13-208ENST00000482558 KLF18A0A0U1RQI7 1052 aa8.83□□□□□ -1
SNX13-208ENST00000482558 ERICH2A1L162 156 aa8.83□□□□□ -1
SNX13-208ENST00000482558 FAM221BA6H8Z2 402 aa8.83□□□□□ -1
SNX13-208ENST00000482558 GOLGA8BA8MQT2 603 aa8.83□□□□□ -1
SNX13-208ENST00000482558 FOXP2O15409 715 aa8.83□□□□□ -1
SNX13-208ENST00000482558 KLF4O43474 513 aa8.83□□□□□ -1
SNX13-208ENST00000482558 RPS6KA4O75676 772 aa8.83□□□□□ -1
SNX13-208ENST00000482558 CTDNEP1O95476 244 aa8.83□□□□□ -1
SNX13-208ENST00000482558 PTMAP06454 111 aaKnown RBP8.83□□□□□ -1
SNX13-208ENST00000482558 CHRNDQ07001 517 aa8.83□□□□□ -1
SNX13-208ENST00000482558 NFIAQ12857 509 aa8.83□□□□□ -1
SNX13-208ENST00000482558 DHX8Q14562 1220 aaKnown RBP8.83□□□□□ -1
SNX13-208ENST00000482558 SASS6Q6UVJ0 657 aa8.83□□□□□ -1
SNX13-208ENST00000482558 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.83□□□□□ -1
SNX13-208ENST00000482558 MFSD6Q6ZSS7 791 aa8.83□□□□□ -1
SNX13-208ENST00000482558 DTX1Q86Y01 620 aa8.83□□□□□ -1
SNX13-208ENST00000482558 IFNL3Q8IZI9 196 aa8.83□□□□□ -1
SNX13-208ENST00000482558 SYNE4Q8N205 404 aa8.83□□□□□ -1
SNX13-208ENST00000482558 AGGF1Q8N302 714 aaeCLIP8.83□□□□□ -1
SNX13-208ENST00000482558 JMYQ8N9B5 988 aa8.83□□□□□ -1
SNX13-208ENST00000482558 FBXO18Q8NFZ0 1043 aa8.83□□□□□ -1
SNX13-208ENST00000482558 ACSBG1Q96GR2 724 aa8.83□□□□□ -1
SNX13-208ENST00000482558 FEZ1Q99689 392 aa8.83□□□□□ -1
SNX13-208ENST00000482558 NAP1L4Q99733 375 aaKnown RBP8.83□□□□□ -1
SNX13-208ENST00000482558 RRAGDQ9NQL2 400 aaPredicted RBP8.83□□□□□ -1
SNX13-208ENST00000482558 NARFQ9UHQ1 456 aa8.83□□□□□ -1
SNX13-208ENST00000482558 STRIP2Q9ULQ0 834 aa8.83□□□□□ -1
SNX13-208ENST00000482558 NAP1L2Q9ULW6 460 aaPredicted RBP8.83□□□□□ -1
SNX13-208ENST00000482558 ZKSCAN5Q9Y2L8 839 aa8.83□□□□□ -1
SNX13-208ENST00000482558 DDX60Q8IY21 1712 aaKnown RBP8.83□□□□□ -1
SNX13-208ENST00000482558 ESYT3A0FGR9 886 aa8.82□□□□□ -1
SNX13-208ENST00000482558 J3QW42 95 aa8.82□□□□□ -1
SNX13-208ENST00000482558 SH2B2O14492 632 aaPredicted RBP8.82□□□□□ -1
SNX13-208ENST00000482558 ZBTB43O43298 467 aa8.82□□□□□ -1
SNX13-208ENST00000482558 KINO60870 393 aaKnown RBP8.82□□□□□ -1
SNX13-208ENST00000482558 LDHAP00338 332 aaKnown RBP8.82□□□□□ -1
SNX13-208ENST00000482558 POLR3DP05423 398 aaPredicted RBP8.82□□□□□ -1
SNX13-208ENST00000482558 KRT18P05783 430 aaKnown RBP8.82□□□□□ -1
SNX13-208ENST00000482558 METAP2P50579 478 aaKnown RBP eCLIP8.82□□□□□ -1
SNX13-208ENST00000482558 CCT2P78371 535 aaKnown RBP8.82□□□□□ -1
SNX13-208ENST00000482558 KIAA2012Q0VF49 1180 aa8.82□□□□□ -1
SNX13-208ENST00000482558 RASGRF1Q13972 1273 aa8.82□□□□□ -1
SNX13-208ENST00000482558 TRIM29Q14134 588 aa8.82□□□□□ -1
SNX13-208ENST00000482558 TAF1CQ15572 869 aaPredicted RBP8.82□□□□□ -1
SNX13-208ENST00000482558 ZRSR2Q15696 482 aaKnown RBP8.82□□□□□ -1
SNX13-208ENST00000482558 AKNAD1Q5T1N1 836 aa8.82□□□□□ -1
SNX13-208ENST00000482558 WDR78Q5VTH9 848 aa8.82□□□□□ -1
SNX13-208ENST00000482558 ADALQ6DHV7 355 aa8.82□□□□□ -1
SNX13-208ENST00000482558 TTLL5Q6EMB2 1281 aa8.82□□□□□ -1
SNX13-208ENST00000482558 TPTE2Q6XPS3 522 aa8.82□□□□□ -1
SNX13-208ENST00000482558 C16orf86Q6ZW13 317 aa8.82□□□□□ -1
SNX13-208ENST00000482558 SAMD3Q8N6K7 520 aa8.82□□□□□ -1
SNX13-208ENST00000482558 MAGEB6Q8N7X4 407 aa8.82□□□□□ -1
SNX13-208ENST00000482558 DDX11Q96FC9 970 aa8.82□□□□□ -1
SNX13-208ENST00000482558 CHAMP1Q96JM3 812 aa8.82□□□□□ -1
SNX13-208ENST00000482558 NAP1L5Q96NT1 182 aaPredicted RBP8.82□□□□□ -1
SNX13-208ENST00000482558 LRRC2Q9BYS8 371 aa8.82□□□□□ -1
SNX13-208ENST00000482558 NAT10Q9H0A0 1025 aaKnown RBP8.82□□□□□ -1
SNX13-208ENST00000482558 DACT1Q9NYF0 836 aa8.82□□□□□ -1
SNX13-208ENST00000482558 LRP2BPQ9P2M1 347 aa8.82□□□□□ -1
SNX13-208ENST00000482558 ORC3Q9UBD5 711 aaPredicted RBP8.82□□□□□ -1
SNX13-208ENST00000482558 ANAPC4Q9UJX5 808 aa8.82□□□□□ -1
SNX13-208ENST00000482558 R3HCC1Q9Y3T6 440 aaKnown RBP8.82□□□□□ -1
SNX13-208ENST00000482558 TIAM2Q8IVF5 1701 aa8.81□□□□□ -1
SNX13-208ENST00000482558 CCDC69A6NI79 296 aa8.81□□□□□ -1
SNX13-208ENST00000482558 MBD4O95243 580 aa8.81□□□□□ -1
SNX13-208ENST00000482558 CHGBP05060 677 aa8.81□□□□□ -1
SNX13-208ENST00000482558 EDN3P14138 238 aa8.81□□□□□ -1
SNX13-208ENST00000482558 ETFBP38117 255 aa8.81□□□□□ -1
SNX13-208ENST00000482558 ANTXR2P58335 489 aa8.81□□□□□ -1
SNX13-208ENST00000482558 HAND2P61296 217 aa8.81□□□□□ -1
SNX13-208ENST00000482558 FAM160A1Q05DH4 1040 aa8.81□□□□□ -1
SNX13-208ENST00000482558 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.81□□□□□ -1
SNX13-208ENST00000482558 ERMP1Q7Z2K6 904 aa8.81□□□□□ -1
SNX13-208ENST00000482558 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.81□□□□□ -1
SNX13-208ENST00000482558 GALNT12Q8IXK2 581 aa8.81□□□□□ -1
SNX13-208ENST00000482558 ARMC10Q8N2F6 343 aa8.81□□□□□ -1
SNX13-208ENST00000482558 RNF214Q8ND24 703 aa8.81□□□□□ -1
SNX13-208ENST00000482558 MPHOSPH6Q99547 160 aaKnown RBP8.81□□□□□ -1
SNX13-208ENST00000482558 KANSL2Q9H9L4 492 aa8.81□□□□□ -1
SNX13-208ENST00000482558 SFMBT1Q9UHJ3 866 aa8.81□□□□□ -1
SNX13-208ENST00000482558 SLC12A7Q9Y666 1083 aa8.81□□□□□ -1
SNX13-208ENST00000482558 RPS6KL1Q9Y6S9 549 aa8.81□□□□□ -1
SNX13-208ENST00000482558 BCL9LQ86UU0 1499 aa8.81□□□□□ -1
SNX13-208ENST00000482558 SCN7AQ01118 1682 aa8.81□□□□□ -1
SNX13-208ENST00000482558 ADAMTS4O75173 837 aa8.8□□□□□ -1
SNX13-208ENST00000482558 KIF4AO95239 1232 aa8.8□□□□□ -1
SNX13-208ENST00000482558 SLC3A2P08195 630 aaKnown RBP8.8□□□□□ -1
SNX13-208ENST00000482558 CALM1P0DP23 149 aa8.8□□□□□ -1
SNX13-208ENST00000482558 CALM2P0DP24 149 aa8.8□□□□□ -1
SNX13-208ENST00000482558 CALM3P0DP25 149 aa8.8□□□□□ -1
SNX13-208ENST00000482558 FDPSP14324 419 aaKnown RBP8.8□□□□□ -1
SNX13-208ENST00000482558 XBP1P17861 261 aa8.8□□□□□ -1
SNX13-208ENST00000482558 IARSP41252 1262 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms