RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 UBLCP1Q8WVY7 318 aaPredicted RBP10.03□□□□□ -0.8
CALD1-220ENST00000482470 RIN2Q8WYP3 895 aaPredicted RBP10.03□□□□□ -0.8
CALD1-220ENST00000482470 DUSP9Q99956 384 aaKnown RBP10.03□□□□□ -0.8
CALD1-220ENST00000482470 PDS5AQ29RF7 1337 aaKnown RBP10.03□□□□□ -0.8
CALD1-220ENST00000482470 ATP2C2O75185 946 aa10.03□□□□□ -0.8
CALD1-220ENST00000482470 FGRP09769 529 aa10.03□□□□□ -0.8
CALD1-220ENST00000482470 CCDC93Q567U6 631 aa10.03□□□□□ -0.8
CALD1-220ENST00000482470 PROCA1Q8NCQ7 364 aaPredicted RBP10.03□□□□□ -0.8
CALD1-220ENST00000482470 FAM212AQ96EL1 285 aa10.03□□□□□ -0.8
CALD1-220ENST00000482470 K7ENM7 598 aa10.03□□□□□ -0.8
CALD1-220ENST00000482470 N4BP1O75113 896 aaKnown RBP10.03□□□□□ -0.8
CALD1-220ENST00000482470 PALMO75781 387 aa10.03□□□□□ -0.8
CALD1-220ENST00000482470 AFPP02771 609 aaKnown RBP10.03□□□□□ -0.8
CALD1-220ENST00000482470 PSMD2Q13200 908 aa10.03□□□□□ -0.8
CALD1-220ENST00000482470 DAGLBQ8NCG7 672 aa10.03□□□□□ -0.8
CALD1-220ENST00000482470 MS4A14Q96JA4 679 aa10.03□□□□□ -0.8
CALD1-220ENST00000482470 GOLPH3Q9H4A6 298 aa10.03□□□□□ -0.8
CALD1-220ENST00000482470 EPB41L5Q9HCM4 733 aa10.03□□□□□ -0.8
CALD1-220ENST00000482470 GCNT4Q9P109 453 aa10.03□□□□□ -0.8
CALD1-220ENST00000482470 CTTNBP2NLQ9P2B4 639 aa10.03□□□□□ -0.8
CALD1-220ENST00000482470 COL1A1P02452 1464 aaPredicted RBP10.03□□□□□ -0.8
CALD1-220ENST00000482470 TRPM3Q9HCF6 1732 aaPredicted RBP10.03□□□□□ -0.8
CALD1-220ENST00000482470 LOC102724159A0A0B4J2E5 919 aa10.02□□□□□ -0.8
CALD1-220ENST00000482470 EIF3CLB5ME19 914 aaKnown RBP10.02□□□□□ -0.8
CALD1-220ENST00000482470 OPA1O60313 960 aa10.02□□□□□ -0.8
CALD1-220ENST00000482470 RNF40O75150 1001 aa10.02□□□□□ -0.8
CALD1-220ENST00000482470 TBC1D8O95759 1140 aa10.02□□□□□ -0.8
CALD1-220ENST00000482470 IL1R1P14778 569 aa10.02□□□□□ -0.8
CALD1-220ENST00000482470 PDIA5Q14554 519 aa10.02□□□□□ -0.8
CALD1-220ENST00000482470 PWP2Q15269 919 aaKnown RBP10.02□□□□□ -0.8
CALD1-220ENST00000482470 CCDC25Q86WR0 208 aa10.02□□□□□ -0.8
CALD1-220ENST00000482470 IFT20Q8IY31 132 aa10.02□□□□□ -0.8
CALD1-220ENST00000482470 FAM186BQ8IYM0 893 aa10.02□□□□□ -0.8
CALD1-220ENST00000482470 CERS5Q8N5B7 392 aa10.02□□□□□ -0.8
CALD1-220ENST00000482470 LMBR1Q8WVP7 490 aa10.02□□□□□ -0.8
CALD1-220ENST00000482470 EIF3CQ99613 913 aaKnown RBP10.02□□□□□ -0.8
CALD1-220ENST00000482470 TCHPQ9BT92 498 aa10.02□□□□□ -0.8
CALD1-220ENST00000482470 ZNF277Q9NRM2 450 aaPredicted RBP10.02□□□□□ -0.8
CALD1-220ENST00000482470 H2AFZP0C0S5 128 aa10.02□□□□□ -0.81
CALD1-220ENST00000482470 CCDC172P0C7W6 258 aa10.02□□□□□ -0.81
CALD1-220ENST00000482470 H2AFVQ71UI9 128 aa10.02□□□□□ -0.81
CALD1-220ENST00000482470 COL23A1Q86Y22 540 aaPredicted RBP10.02□□□□□ -0.81
CALD1-220ENST00000482470 C4orf32Q8N8J7 132 aa10.02□□□□□ -0.81
CALD1-220ENST00000482470 BANK1Q8NDB2 785 aa10.02□□□□□ -0.81
CALD1-220ENST00000482470 CYP2W1Q8TAV3 490 aa10.02□□□□□ -0.81
CALD1-220ENST00000482470 DYDC2Q96IM9 177 aa10.02□□□□□ -0.81
CALD1-220ENST00000482470 RPGRIP1Q96KN7 1286 aa10.02□□□□□ -0.81
CALD1-220ENST00000482470 NUCKS1Q9H1E3 243 aaKnown RBP10.02□□□□□ -0.81
CALD1-220ENST00000482470 DPH5Q9H2P9 285 aa10.02□□□□□ -0.81
CALD1-220ENST00000482470 RIOX1Q9H6W3 641 aa10.02□□□□□ -0.81
CALD1-220ENST00000482470 MARF1Q9Y4F3 1742 aaKnown RBP10.02□□□□□ -0.81
CALD1-220ENST00000482470 KRT5P13647 590 aa10.02□□□□□ -0.81
CALD1-220ENST00000482470 NMT1P30419 496 aaKnown RBP10.02□□□□□ -0.81
CALD1-220ENST00000482470 HNRNPH2P55795 449 aaKnown RBP10.02□□□□□ -0.81
CALD1-220ENST00000482470 IRF2BP1Q8IU81 584 aa10.02□□□□□ -0.81
CALD1-220ENST00000482470 PNMA5Q96PV4 448 aa10.02□□□□□ -0.81
CALD1-220ENST00000482470 AP1M1Q9BXS5 423 aa10.02□□□□□ -0.81
CALD1-220ENST00000482470 MRPL11Q9Y3B7 192 aaKnown RBP10.02□□□□□ -0.81
CALD1-220ENST00000482470 KLRC4O43908 158 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 HEXIM1O94992 359 aaKnown RBP10.01□□□□□ -0.81
CALD1-220ENST00000482470 EIF2AK2P19525 551 aaKnown RBP10.01□□□□□ -0.81
CALD1-220ENST00000482470 SHMT1P34896 483 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 ECE1P42892 770 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 SLC35G1Q2M3R5 365 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 SLC27A3Q5K4L6 730 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 FAM102BQ5T8I3 360 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 ALKBH5Q6P6C2 394 aaKnown RBP10.01□□□□□ -0.81
CALD1-220ENST00000482470 NIM1KQ8IY84 436 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 SH2D4AQ9H788 454 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 BLOC1S4Q9NUP1 217 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 ALS2Q96Q42 1657 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 RSPH10B2B2RC85 870 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 ATP8B1O43520 1251 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 SERPING1P05155 500 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 RSPH10BP0C881 870 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 SLC9A1P19634 815 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 HERVK_113P62684 666 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 GOLGA8IPA6NC78 632 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 GOLGA8JA6NMD2 632 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 KRIT1O00522 736 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 MED24O75448 989 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 SASH3O75995 380 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 TRIM49P0CI25 452 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 TRIM49CP0CI26 452 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 MYBP10242 640 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 NT5C2P49902 561 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 PSMC6P62333 389 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 KCTD19Q17RG1 926 aaPredicted RBP10.01□□□□□ -0.81
CALD1-220ENST00000482470 PPM1KQ8N3J5 372 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 UHMK1Q8TAS1 419 aaKnown RBP10.01□□□□□ -0.81
CALD1-220ENST00000482470 COG1Q8WTW3 980 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 PRMT6Q96LA8 375 aaPredicted RBP10.01□□□□□ -0.81
CALD1-220ENST00000482470 CAPN6Q9Y6Q1 641 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 GOLGA6L10A0A0M3HER8 536 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 GSTTP1A0A1W2PQM5 241 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 POLRMTO00411 1230 aaKnown RBP10.01□□□□□ -0.81
CALD1-220ENST00000482470 NR3C1P04150 777 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 XKR9Q5GH70 373 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 ACER1Q8TDN7 264 aa10.01□□□□□ -0.81
CALD1-220ENST00000482470 DCAF4Q8WV16 495 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms