RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 NID2Q14112 1375 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 NRCAMQ92823 1304 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 ESYT2A0FGR8 921 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 RSPH10B2B2RC85 870 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 RSPH10BP0C881 870 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 SREBF1P36956 1147 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 RABGGTBP53611 331 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 CCT2P78371 535 aaKnown RBP22.69■■□□□ 1.22
MSH5-215ENST00000482280 ARHGAP4P98171 946 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 IKBKEQ14164 716 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 ZNF618Q5T7W0 954 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 JAKMIP3Q5VZ66 844 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 PHKBQ93100 1093 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 ZBED2Q9BTP6 218 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 TM6SF1Q9BZW5 370 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 RNPEPQ9H4A4 650 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 SETD4Q9NVD3 440 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 TMEM260Q9NX78 707 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 SLC9A2Q9UBY0 812 aa22.69■■□□□ 1.22
MSH5-215ENST00000482280 CAND2O75155 1236 aa22.68■■□□□ 1.22
MSH5-215ENST00000482280 PDIA3P30101 505 aaKnown RBP22.68■■□□□ 1.22
MSH5-215ENST00000482280 TANC1Q9C0D5 1861 aa22.68■■□□□ 1.22
MSH5-215ENST00000482280 ABHD14A-ACY1A0A1B0GW23 586 aa22.67■■□□□ 1.22
MSH5-215ENST00000482280 TREHO43280 583 aa22.67■■□□□ 1.22
MSH5-215ENST00000482280 MARK3P27448 753 aa22.67■■□□□ 1.22
MSH5-215ENST00000482280 RSPH3Q86UC2 560 aa22.67■■□□□ 1.22
MSH5-215ENST00000482280 UPF3BQ9BZI7 483 aaKnown RBP22.67■■□□□ 1.22
MSH5-215ENST00000482280 ZMYND12Q9H0C1 365 aa22.67■■□□□ 1.22
MSH5-215ENST00000482280 PDRG1Q9NUG6 133 aa22.67■■□□□ 1.22
MSH5-215ENST00000482280 IFNAR1P17181 557 aa22.66■■□□□ 1.22
MSH5-215ENST00000482280 SSRP1Q08945 709 aaKnown RBP22.66■■□□□ 1.22
MSH5-215ENST00000482280 PPFIA1Q13136 1202 aa22.66■■□□□ 1.22
MSH5-215ENST00000482280 HERC6Q8IVU3 1022 aa22.66■■□□□ 1.22
MSH5-215ENST00000482280 VWCEQ96DN2 955 aa22.66■■□□□ 1.22
MSH5-215ENST00000482280 PRDM12Q9H4Q4 367 aa22.66■■□□□ 1.22
MSH5-215ENST00000482280 YBX2Q9Y2T7 364 aaKnown RBP22.66■■□□□ 1.22
MSH5-215ENST00000482280 NFASCO94856 1347 aa22.65■■□□□ 1.22
MSH5-215ENST00000482280 TLL1O43897 1013 aa22.65■■□□□ 1.22
MSH5-215ENST00000482280 NBNO60934 754 aa22.65■■□□□ 1.22
MSH5-215ENST00000482280 LGR5O75473 907 aa22.65■■□□□ 1.22
MSH5-215ENST00000482280 CXCL10P02778 98 aa22.65■■□□□ 1.22
MSH5-215ENST00000482280 CLK2P49760 499 aaKnown RBP22.65■■□□□ 1.22
MSH5-215ENST00000482280 EVCP57679 992 aa22.65■■□□□ 1.22
MSH5-215ENST00000482280 TRIM71Q2Q1W2 868 aaKnown RBP22.65■■□□□ 1.22
MSH5-215ENST00000482280 TAF2Q6P1X5 1199 aa22.65■■□□□ 1.22
MSH5-215ENST00000482280 NIPA1Q7RTP0 329 aa22.65■■□□□ 1.22
MSH5-215ENST00000482280 PLA2G4DQ86XP0 818 aa22.65■■□□□ 1.22
MSH5-215ENST00000482280 LMBR1Q8WVP7 490 aa22.65■■□□□ 1.22
MSH5-215ENST00000482280 ZNF274Q96GC6 653 aaPredicted RBP22.65■■□□□ 1.22
MSH5-215ENST00000482280 NCOA5Q9HCD5 579 aaKnown RBP22.65■■□□□ 1.22
MSH5-215ENST00000482280 TRPC6Q9Y210 931 aa22.65■■□□□ 1.22
MSH5-215ENST00000482280 GSTTP1A0A1W2PQM5 241 aa22.64■■□□□ 1.21
MSH5-215ENST00000482280 PPFIA3O75145 1194 aa22.64■■□□□ 1.21
MSH5-215ENST00000482280 CTSHP09668 335 aa22.64■■□□□ 1.21
MSH5-215ENST00000482280 IGFBP4P22692 258 aa22.64■■□□□ 1.21
MSH5-215ENST00000482280 HOXC8P31273 242 aa22.64■■□□□ 1.21
MSH5-215ENST00000482280 NLRP5P59047 1200 aa22.64■■□□□ 1.21
MSH5-215ENST00000482280 WDR5P61964 334 aaKnown RBP22.64■■□□□ 1.21
MSH5-215ENST00000482280 SETQ01105 290 aaPredicted RBP22.64■■□□□ 1.21
MSH5-215ENST00000482280 HIC1Q14526 733 aa22.64■■□□□ 1.21
MSH5-215ENST00000482280 CYP2W1Q8TAV3 490 aa22.64■■□□□ 1.21
MSH5-215ENST00000482280 SEPT8Q92599 483 aa22.64■■□□□ 1.21
MSH5-215ENST00000482280 WNT8BQ93098 351 aa22.64■■□□□ 1.21
MSH5-215ENST00000482280 AGO4Q9HCK5 861 aaKnown RBP22.64■■□□□ 1.21
MSH5-215ENST00000482280 MEIS1O00470 390 aa22.63■■□□□ 1.21
MSH5-215ENST00000482280 CDKL5O76039 1030 aa22.63■■□□□ 1.21
MSH5-215ENST00000482280 RPLP2P05387 115 aaKnown RBP22.63■■□□□ 1.21
MSH5-215ENST00000482280 CA3P07451 260 aa22.63■■□□□ 1.21
MSH5-215ENST00000482280 ARP10275 920 aa22.63■■□□□ 1.21
MSH5-215ENST00000482280 MYOGP15173 224 aa22.63■■□□□ 1.21
MSH5-215ENST00000482280 ACTR2P61160 394 aa22.63■■□□□ 1.21
MSH5-215ENST00000482280 STK3Q13188 491 aa22.63■■□□□ 1.21
MSH5-215ENST00000482280 TOB2Q14106 344 aaPredicted RBP22.63■■□□□ 1.21
MSH5-215ENST00000482280 GRIK4Q16099 956 aa22.63■■□□□ 1.21
MSH5-215ENST00000482280 PKN1Q16512 942 aa22.63■■□□□ 1.21
MSH5-215ENST00000482280 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.63■■□□□ 1.21
MSH5-215ENST00000482280 SH3GLB2Q9NR46 395 aa22.63■■□□□ 1.21
MSH5-215ENST00000482280 TUBE1Q9UJT0 475 aa22.63■■□□□ 1.21
MSH5-215ENST00000482280 TELO2Q9Y4R8 837 aa22.63■■□□□ 1.21
MSH5-215ENST00000482280 SCN5AQ14524 2016 aa22.62■■□□□ 1.21
MSH5-215ENST00000482280 RRN3P2A6NIE6 340 aa22.62■■□□□ 1.21
MSH5-215ENST00000482280 DDX39AO00148 427 aaKnown RBP22.62■■□□□ 1.21
MSH5-215ENST00000482280 BACH1O14867 736 aa22.62■■□□□ 1.21
MSH5-215ENST00000482280 AMHP03971 560 aa22.62■■□□□ 1.21
MSH5-215ENST00000482280 IGBP1P78318 339 aa22.62■■□□□ 1.21
MSH5-215ENST00000482280 NTRK3Q16288 839 aa22.62■■□□□ 1.21
MSH5-215ENST00000482280 FAM160B1Q5W0V3 765 aa22.62■■□□□ 1.21
MSH5-215ENST00000482280 ZNF577Q9BSK1 485 aa22.62■■□□□ 1.21
MSH5-215ENST00000482280 VPS54Q9P1Q0 977 aa22.62■■□□□ 1.21
MSH5-215ENST00000482280 IPO5O00410 1097 aaKnown RBP22.61■■□□□ 1.21
MSH5-215ENST00000482280 DEXIO95424 95 aa22.61■■□□□ 1.21
MSH5-215ENST00000482280 CYP3A4P08684 503 aa22.61■■□□□ 1.21
MSH5-215ENST00000482280 SLC26A2P50443 739 aa22.61■■□□□ 1.21
MSH5-215ENST00000482280 STAT5BP51692 787 aa22.61■■□□□ 1.21
MSH5-215ENST00000482280 ANKRD1Q15327 319 aa22.61■■□□□ 1.21
MSH5-215ENST00000482280 C22orf23Q9BZE7 217 aa22.61■■□□□ 1.21
MSH5-215ENST00000482280 M0QZ92 97 aa22.6■■□□□ 1.21
MSH5-215ENST00000482280 ANAPC15P60006 121 aa22.6■■□□□ 1.21
MSH5-215ENST00000482280 GPNMBQ14956 572 aa22.6■■□□□ 1.21
MSH5-215ENST00000482280 MIS18BP1Q6P0N0 1132 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms