RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ASXL2Q76L83 1435 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 hCG_1984214I3L0E3 225 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 AKAP10O43572 662 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 PIP5K1CO60331 668 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 USP2O75604 605 aaPredicted RBP5.01□□□□□ -1.61
VPS41-212ENST00000482217 HPXP02790 462 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 GLI1P08151 1106 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 LCP1P13796 627 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 SERPINB3P29508 390 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 TDO2P48775 406 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 MMP14P50281 582 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 HK2P52789 917 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 GEMIN4P57678 1058 aaKnown RBP5.01□□□□□ -1.61
VPS41-212ENST00000482217 RPL11P62913 178 aaKnown RBP5.01□□□□□ -1.61
VPS41-212ENST00000482217 MORC3Q14149 939 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 SLC14A2Q15849 920 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 KIZQ2M2Z5 673 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 MBLAC2Q68D91 279 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 IL31Q6EBC2 164 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 CCDC70Q6NSX1 233 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 LBX2Q6XYB7 198 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 CEP128Q6ZU80 1094 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 HDGFL2Q7Z4V5 671 aaPredicted RBP5.01□□□□□ -1.61
VPS41-212ENST00000482217 LILRA2Q8N149 483 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 KIRREL1Q96J84 757 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 JMJD8Q96S16 334 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 MYCBPQ99417 103 aaPredicted RBP5.01□□□□□ -1.61
VPS41-212ENST00000482217 ALG1Q9BT22 464 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 CENPOQ9BU64 300 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 RETREG1Q9H6L5 497 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 NGRNQ9NPE2 291 aaKnown RBP5.01□□□□□ -1.61
VPS41-212ENST00000482217 C19orf73Q9NVV2 129 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 ZIM2Q9NZV7 527 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 ZNF69Q9UC07 566 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 ISY1Q9ULR0 285 aaKnown RBP5.01□□□□□ -1.61
VPS41-212ENST00000482217 TRAF6Q9Y4K3 522 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 TAF6LQ9Y6J9 622 aa5.01□□□□□ -1.61
VPS41-212ENST00000482217 KRTAP4-8A0A0G2JLE6 195 aa5□□□□□ -1.61
VPS41-212ENST00000482217 B4E1Z4 1266 aa5□□□□□ -1.61
VPS41-212ENST00000482217 PRRT4C9JH25 899 aa5□□□□□ -1.61
VPS41-212ENST00000482217 ARVCFO00192 962 aa5□□□□□ -1.61
VPS41-212ENST00000482217 TCEA3O75764 348 aa5□□□□□ -1.61
VPS41-212ENST00000482217 FARP2O94887 1054 aaPredicted RBP5□□□□□ -1.61
VPS41-212ENST00000482217 CRTAMO95727 393 aa5□□□□□ -1.61
VPS41-212ENST00000482217 ASLP04424 464 aa5□□□□□ -1.61
VPS41-212ENST00000482217 CNGA1P29973 690 aa5□□□□□ -1.61
VPS41-212ENST00000482217 NEK3P51956 506 aa5□□□□□ -1.61
VPS41-212ENST00000482217 ZBED6P86452 979 aa5□□□□□ -1.61
VPS41-212ENST00000482217 GUCY1A3Q02108 690 aa5□□□□□ -1.61
VPS41-212ENST00000482217 LSAMPQ13449 338 aa5□□□□□ -1.61
VPS41-212ENST00000482217 SNX17Q15036 470 aa5□□□□□ -1.61
VPS41-212ENST00000482217 HSF5Q4G112 596 aaPredicted RBP5□□□□□ -1.61
VPS41-212ENST00000482217 ERICH6BQ5W0A0 696 aa5□□□□□ -1.61
VPS41-212ENST00000482217 C16orf54Q6UWD8 224 aa5□□□□□ -1.61
VPS41-212ENST00000482217 KRT77Q7Z794 578 aa5□□□□□ -1.61
VPS41-212ENST00000482217 MTDHQ86UE4 582 aaKnown RBP5□□□□□ -1.61
VPS41-212ENST00000482217 Q8N1Y9 231 aa5□□□□□ -1.61
VPS41-212ENST00000482217 OTUD6BQ8N6M0 293 aa5□□□□□ -1.61
VPS41-212ENST00000482217 KIAA1958Q8N8K9 716 aa5□□□□□ -1.61
VPS41-212ENST00000482217 RTFDC1Q9BY42 306 aaPredicted RBP5□□□□□ -1.61
VPS41-212ENST00000482217 SP110Q9HB58 689 aa5□□□□□ -1.61
VPS41-212ENST00000482217 C9orf78Q9NZ63 289 aaPredicted RBP5□□□□□ -1.61
VPS41-212ENST00000482217 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5□□□□□ -1.61
VPS41-212ENST00000482217 ACSL6Q9UKU0 697 aa5□□□□□ -1.61
VPS41-212ENST00000482217 NOB1Q9ULX3 412 aaKnown RBP5□□□□□ -1.61
VPS41-212ENST00000482217 PCDHA2Q9Y5H9 948 aa5□□□□□ -1.61
VPS41-212ENST00000482217 TCRBV16S1A1N1A0A5B0 115 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 NOTOA8MTQ0 251 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 H7BY64 318 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 IRS4O14654 1257 aaPredicted RBP4.99□□□□□ -1.61
VPS41-212ENST00000482217 WNT9AO14904 365 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 MSCO60682 206 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 DNAJC8O75937 253 aaPredicted RBP4.99□□□□□ -1.61
VPS41-212ENST00000482217 NPTXRO95502 500 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 F2P00734 622 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 SDSP20132 328 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 IGFALSP35858 605 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 FLT3P36888 993 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 PAK1Q13153 545 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 ALFQ53S48 1182 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 ANO1Q5XXA6 986 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 KRTAP19-1Q8IUB9 90 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 UBR7Q8N806 425 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 BHLHE22Q8NFJ8 381 aaPredicted RBP4.99□□□□□ -1.61
VPS41-212ENST00000482217 DPF3Q92784 378 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 SCLYQ96I15 445 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 SEZ6LQ9BYH1 1024 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 ASPSCR1Q9BZE9 553 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 PDLIM7Q9NR12 457 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 FEZ2Q9UHY8 353 aaPredicted RBP4.99□□□□□ -1.61
VPS41-212ENST00000482217 EVLQ9UI08 416 aaPredicted RBP4.99□□□□□ -1.61
VPS41-212ENST00000482217 PCDHA8Q9Y5H6 950 aa4.99□□□□□ -1.61
VPS41-212ENST00000482217 A0A087X0B3 334 aa4.98□□□□□ -1.61
VPS41-212ENST00000482217 A0A1W2PQ27 194 aa4.98□□□□□ -1.61
VPS41-212ENST00000482217 A0A1W2PQ64 194 aa4.98□□□□□ -1.61
VPS41-212ENST00000482217 A0A1W2PQC6 194 aa4.98□□□□□ -1.61
VPS41-212ENST00000482217 A0A1W2PQD8 194 aa4.98□□□□□ -1.61
VPS41-212ENST00000482217 ZNF503-AS2A6NEH8 195 aa4.98□□□□□ -1.61
VPS41-212ENST00000482217 LRRC10BA6NIK2 292 aa4.98□□□□□ -1.61
VPS41-212ENST00000482217 OPA1O60313 960 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms