RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ZNF200P98182 395 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-213ENST00000482192 HIC1Q14526 733 aa13.54□□□□□ -0.24
HMGN1-213ENST00000482192 SERINC5Q86VE9 423 aa13.54□□□□□ -0.24
HMGN1-213ENST00000482192 FAM177A1Q8N128 213 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-213ENST00000482192 ATP6V0A1Q93050 837 aa13.54□□□□□ -0.24
HMGN1-213ENST00000482192 VWCEQ96DN2 955 aa13.54□□□□□ -0.24
HMGN1-213ENST00000482192 ERAP1Q9NZ08 941 aa13.54□□□□□ -0.24
HMGN1-213ENST00000482192 CXXC1Q9P0U4 656 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-213ENST00000482192 SLC9A2Q9UBY0 812 aa13.54□□□□□ -0.24
HMGN1-213ENST00000482192 TPCN1Q9ULQ1 816 aa13.54□□□□□ -0.24
HMGN1-213ENST00000482192 EMSYQ7Z589 1322 aa13.54□□□□□ -0.24
HMGN1-213ENST00000482192 TANC1Q9C0D5 1861 aa13.54□□□□□ -0.24
HMGN1-213ENST00000482192 LAMA3Q16787 3333 aa13.53□□□□□ -0.24
HMGN1-213ENST00000482192 MYH7BA7E2Y1 1941 aa13.53□□□□□ -0.24
HMGN1-213ENST00000482192 FAM86B1E9PN63 330 aa13.53□□□□□ -0.24
HMGN1-213ENST00000482192 ADAMTS3O15072 1205 aa13.53□□□□□ -0.24
HMGN1-213ENST00000482192 PFKFB2O60825 505 aa13.53□□□□□ -0.24
HMGN1-213ENST00000482192 FAM86B2P0C5J1 330 aa13.53□□□□□ -0.24
HMGN1-213ENST00000482192 AK2P54819 239 aa13.53□□□□□ -0.24
HMGN1-213ENST00000482192 SETQ01105 290 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-213ENST00000482192 SCRN1Q12765 414 aa13.53□□□□□ -0.24
HMGN1-213ENST00000482192 ITGB3BPQ13352 177 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-213ENST00000482192 TRIM71Q2Q1W2 868 aaKnown RBP13.53□□□□□ -0.24
HMGN1-213ENST00000482192 PLA2G4DQ86XP0 818 aa13.53□□□□□ -0.24
HMGN1-213ENST00000482192 GLG1Q92896 1179 aa13.53□□□□□ -0.24
HMGN1-213ENST00000482192 FTOQ9C0B1 505 aaKnown RBP eCLIP13.53□□□□□ -0.24
HMGN1-213ENST00000482192 RNPEPQ9H4A4 650 aa13.53□□□□□ -0.24
HMGN1-213ENST00000482192 SMARCAD1Q9H4L7 1026 aa13.53□□□□□ -0.24
HMGN1-213ENST00000482192 SLC4A7Q9Y6M7 1214 aa13.53□□□□□ -0.24
HMGN1-213ENST00000482192 IGLV3-22A0A075B6J6 115 aa13.52□□□□□ -0.25
HMGN1-213ENST00000482192 ZBBXA8MT70 800 aa13.52□□□□□ -0.25
HMGN1-213ENST00000482192 SEC24BO95487 1268 aa13.52□□□□□ -0.25
HMGN1-213ENST00000482192 DNAJB2P25686 324 aa13.52□□□□□ -0.25
HMGN1-213ENST00000482192 THPOP40225 353 aa13.52□□□□□ -0.25
HMGN1-213ENST00000482192 ACTR2P61160 394 aa13.52□□□□□ -0.25
HMGN1-213ENST00000482192 GALNT17Q6IS24 598 aa13.52□□□□□ -0.25
HMGN1-213ENST00000482192 RASGRP4Q8TDF6 673 aa13.52□□□□□ -0.25
HMGN1-213ENST00000482192 LMBR1Q8WVP7 490 aa13.52□□□□□ -0.25
HMGN1-213ENST00000482192 WNT8BQ93098 351 aa13.52□□□□□ -0.25
HMGN1-213ENST00000482192 FAM161BQ96MY7 647 aa13.52□□□□□ -0.25
HMGN1-213ENST00000482192 C22orf23Q9BZE7 217 aa13.52□□□□□ -0.25
HMGN1-213ENST00000482192 AZI2Q9H6S1 392 aa13.52□□□□□ -0.25
HMGN1-213ENST00000482192 SETD4Q9NVD3 440 aa13.52□□□□□ -0.25
HMGN1-213ENST00000482192 PCDHA4Q9UN74 947 aa13.52□□□□□ -0.25
HMGN1-213ENST00000482192 NRCAMQ92823 1304 aa13.52□□□□□ -0.25
HMGN1-213ENST00000482192 STK36Q9NRP7 1315 aa13.52□□□□□ -0.25
HMGN1-213ENST00000482192 IPO5O00410 1097 aaKnown RBP13.51□□□□□ -0.25
HMGN1-213ENST00000482192 TREHO43280 583 aa13.51□□□□□ -0.25
HMGN1-213ENST00000482192 CAND2O75155 1236 aa13.51□□□□□ -0.25
HMGN1-213ENST00000482192 LGR5O75473 907 aa13.51□□□□□ -0.25
HMGN1-213ENST00000482192 BAIAP3O94812 1187 aa13.51□□□□□ -0.25
HMGN1-213ENST00000482192 MARK3P27448 753 aa13.51□□□□□ -0.25
HMGN1-213ENST00000482192 CIITAP33076 1130 aa13.51□□□□□ -0.25
HMGN1-213ENST00000482192 NEK4P51957 841 aa13.51□□□□□ -0.25
HMGN1-213ENST00000482192 PPFIA1Q13136 1202 aa13.51□□□□□ -0.25
HMGN1-213ENST00000482192 RAB30Q15771 203 aa13.51□□□□□ -0.25
HMGN1-213ENST00000482192 ZNF618Q5T7W0 954 aa13.51□□□□□ -0.25
HMGN1-213ENST00000482192 DAGLBQ8NCG7 672 aa13.51□□□□□ -0.25
HMGN1-213ENST00000482192 TIFAQ96CG3 184 aa13.51□□□□□ -0.25
HMGN1-213ENST00000482192 GUCD1Q96NT3 240 aa13.51□□□□□ -0.25
HMGN1-213ENST00000482192 ZNF577Q9BSK1 485 aa13.51□□□□□ -0.25
HMGN1-213ENST00000482192 PBX4Q9BYU1 374 aa13.51□□□□□ -0.25
HMGN1-213ENST00000482192 SEMA6BQ9H3T3 888 aa13.51□□□□□ -0.25
HMGN1-213ENST00000482192 STXBP5LQ9Y2K9 1186 aa13.51□□□□□ -0.25
HMGN1-213ENST00000482192 DOCK5Q9H7D0 1870 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 GRXCR1A8MXD5 290 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 NBNO60934 754 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 CXCL10P02778 98 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 ATP2A2P16615 1042 aaKnown RBP13.5□□□□□ -0.25
HMGN1-213ENST00000482192 XBP1P17861 261 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 PBX2P40425 430 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 SLC26A2P50443 739 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 USP11P51784 963 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 ADAM17P78536 824 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 GPNMBQ14956 572 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 PRR16Q569H4 304 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 TAF2Q6P1X5 1199 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 TRAF7Q6Q0C0 670 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 PLPPR4Q7Z2D5 763 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 BLIDQ8IZY5 108 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 TNPO1Q92973 898 aaKnown RBP13.5□□□□□ -0.25
HMGN1-213ENST00000482192 AIFM3Q96NN9 605 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 SLC9A7Q96T83 725 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 TTYH1Q9H313 450 aaPredicted RBP13.5□□□□□ -0.25
HMGN1-213ENST00000482192 TBC1D22BQ9NU19 505 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 TCEAL9Q9UHQ7 104 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 MSRAQ9UJ68 235 aa13.5□□□□□ -0.25
HMGN1-213ENST00000482192 RSPH10B2B2RC85 870 aa13.49□□□□□ -0.25
HMGN1-213ENST00000482192 DDX39AO00148 427 aaKnown RBP13.49□□□□□ -0.25
HMGN1-213ENST00000482192 DHX15O43143 795 aaKnown RBP13.49□□□□□ -0.25
HMGN1-213ENST00000482192 ATG7O95352 703 aa13.49□□□□□ -0.25
HMGN1-213ENST00000482192 CCNE2O96020 404 aa13.49□□□□□ -0.25
HMGN1-213ENST00000482192 RSPH10BP0C881 870 aa13.49□□□□□ -0.25
HMGN1-213ENST00000482192 STAT5BP51692 787 aa13.49□□□□□ -0.25
HMGN1-213ENST00000482192 GRIK4Q16099 956 aa13.49□□□□□ -0.25
HMGN1-213ENST00000482192 ME3Q16798 604 aa13.49□□□□□ -0.25
HMGN1-213ENST00000482192 C8orf34Q49A92 452 aa13.49□□□□□ -0.25
HMGN1-213ENST00000482192 MIS18BP1Q6P0N0 1132 aa13.49□□□□□ -0.25
HMGN1-213ENST00000482192 CNKSR3Q6P9H4 555 aa13.49□□□□□ -0.25
HMGN1-213ENST00000482192 PHOSPHO2Q8TCD6 241 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms