RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 SH3BP1Q9Y3L3 701 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 DHX15O43143 795 aaKnown RBP13.05□□□□□ -0.32
HPS4-212ENST00000481910 PSMD10O75832 226 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 GGPS1O95749 300 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 PRPHP41219 470 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 TECP42680 631 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 DTHD1Q6ZMT9 781 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 CYFIP1Q7L576 1253 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 KCNG4Q8TDN1 519 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 COPS5Q92905 334 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 TEKT3Q9BXF9 490 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 BCAS3Q9H6U6 928 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 MLXIPQ9HAP2 919 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 GDPD2Q9HCC8 539 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 HMX1Q9NP08 348 aaPredicted RBP13.05□□□□□ -0.32
HPS4-212ENST00000481910 RCOR1Q9UKL0 485 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 DOCK5Q9H7D0 1870 aa13.05□□□□□ -0.32
HPS4-212ENST00000481910 VWA3AA6NCI4 1184 aa13.04□□□□□ -0.32
HPS4-212ENST00000481910 NKRFO15226 690 aaKnown RBP eCLIP13.04□□□□□ -0.32
HPS4-212ENST00000481910 SEPT4O43236 478 aa13.04□□□□□ -0.32
HPS4-212ENST00000481910 ADCY6O43306 1168 aa13.04□□□□□ -0.32
HPS4-212ENST00000481910 TMEM266Q2M3C6 531 aa13.04□□□□□ -0.32
HPS4-212ENST00000481910 CELF3Q5SZQ8 465 aaKnown RBP13.04□□□□□ -0.32
HPS4-212ENST00000481910 GJC2Q5T442 439 aaPredicted RBP13.04□□□□□ -0.32
HPS4-212ENST00000481910 TCEAL9Q9UHQ7 104 aa13.04□□□□□ -0.32
HPS4-212ENST00000481910 NFASCO94856 1347 aa13.04□□□□□ -0.32
HPS4-212ENST00000481910 PPP6R2O75170 966 aa13.03□□□□□ -0.32
HPS4-212ENST00000481910 FARP2O94887 1054 aaPredicted RBP13.03□□□□□ -0.32
HPS4-212ENST00000481910 MYCP01106 439 aaPredicted RBP13.03□□□□□ -0.32
HPS4-212ENST00000481910 GH1P01241 217 aa13.03□□□□□ -0.32
HPS4-212ENST00000481910 PTGS1P23219 599 aa13.03□□□□□ -0.32
HPS4-212ENST00000481910 SP4Q02446 784 aa13.03□□□□□ -0.32
HPS4-212ENST00000481910 IL17AQ16552 155 aa13.03□□□□□ -0.32
HPS4-212ENST00000481910 LEO1Q8WVC0 666 aaPredicted RBP13.03□□□□□ -0.32
HPS4-212ENST00000481910 FERMT2Q96AC1 680 aa13.03□□□□□ -0.32
HPS4-212ENST00000481910 JPH1Q9HDC5 661 aaPredicted RBP13.03□□□□□ -0.32
HPS4-212ENST00000481910 SLC9A2Q9UBY0 812 aa13.03□□□□□ -0.32
HPS4-212ENST00000481910 GNEQ9Y223 722 aaKnown RBP13.03□□□□□ -0.32
HPS4-212ENST00000481910 DYNC1LI2O43237 492 aaPredicted RBP13.03□□□□□ -0.32
HPS4-212ENST00000481910 CHMP2AO43633 222 aa13.03□□□□□ -0.32
HPS4-212ENST00000481910 ME1P48163 572 aa13.03□□□□□ -0.32
HPS4-212ENST00000481910 LAMC2Q13753 1193 aa13.03□□□□□ -0.32
HPS4-212ENST00000481910 L1TD1Q5T7N2 865 aaKnown RBP13.03□□□□□ -0.32
HPS4-212ENST00000481910 METTL7BQ6UX53 244 aa13.03□□□□□ -0.32
HPS4-212ENST00000481910 KRI1Q8N9T8 703 aaKnown RBP13.03□□□□□ -0.32
HPS4-212ENST00000481910 LENG1Q96BZ8 264 aaPredicted RBP13.03□□□□□ -0.32
HPS4-212ENST00000481910 SPATA33Q96N06 139 aa13.03□□□□□ -0.32
HPS4-212ENST00000481910 RAB34Q9BZG1 259 aa13.03□□□□□ -0.32
HPS4-212ENST00000481910 SRPRBQ9Y5M8 271 aaKnown RBP13.03□□□□□ -0.32
HPS4-212ENST00000481910 DUSP11O75319 330 aaKnown RBP13.02□□□□□ -0.32
HPS4-212ENST00000481910 RARBP10826 455 aa13.02□□□□□ -0.32
HPS4-212ENST00000481910 FXR2P51116 673 aaKnown RBP eCLIP13.02□□□□□ -0.32
HPS4-212ENST00000481910 KRT76Q01546 638 aa13.02□□□□□ -0.32
HPS4-212ENST00000481910 PPP2R5CQ13362 524 aa13.02□□□□□ -0.32
HPS4-212ENST00000481910 PDIA5Q14554 519 aa13.02□□□□□ -0.32
HPS4-212ENST00000481910 CLEC17AQ6ZS10 378 aa13.02□□□□□ -0.32
HPS4-212ENST00000481910 TLK2Q86UE8 772 aa13.02□□□□□ -0.32
HPS4-212ENST00000481910 OR6J1Q8NGC5 347 aa13.02□□□□□ -0.32
HPS4-212ENST00000481910 CLIC6Q96NY7 704 aa13.02□□□□□ -0.32
HPS4-212ENST00000481910 GBP4Q96PP9 640 aa13.02□□□□□ -0.32
HPS4-212ENST00000481910 AP5M1Q9H0R1 490 aa13.02□□□□□ -0.32
HPS4-212ENST00000481910 DDX20Q9UHI6 824 aaKnown RBP13.02□□□□□ -0.32
HPS4-212ENST00000481910 FBXO2Q9UK22 296 aaPredicted RBP13.02□□□□□ -0.32
HPS4-212ENST00000481910 VAV3Q9UKW4 847 aa13.02□□□□□ -0.32
HPS4-212ENST00000481910 PCDHA7Q9UN72 937 aa13.02□□□□□ -0.32
HPS4-212ENST00000481910 Q9Y3F1 56 aa13.02□□□□□ -0.32
HPS4-212ENST00000481910 SAMM50Q9Y512 469 aa13.02□□□□□ -0.32
HPS4-212ENST00000481910 MORC2Q9Y6X9 1032 aaPredicted RBP13.02□□□□□ -0.32
HPS4-212ENST00000481910 POTEMA6NI47 508 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 NOP56O00567 594 aaKnown RBP13.01□□□□□ -0.33
HPS4-212ENST00000481910 CCNE2O96020 404 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 GRIN1Q05586 938 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 ARHGAP1Q07960 439 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 SPIRE1Q08AE8 756 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 MTFR1Q15390 333 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 CSPP1Q1MSJ5 1256 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 HSDL1Q3SXM5 330 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 NCAPH2Q6IBW4 605 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 UNC93B1Q9H1C4 597 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 UNC45AQ9H3U1 944 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 LRWD1Q9UFC0 647 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 MSCO60682 206 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 ACTR2P61160 394 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 ZNF746Q6NUN9 644 aaPredicted RBP13.01□□□□□ -0.33
HPS4-212ENST00000481910 B3GNT9Q6UX72 402 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 MIER3Q7Z3K6 550 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 IGSF22Q8N9C0 903 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 EMID1Q96A84 441 aaPredicted RBP13.01□□□□□ -0.33
HPS4-212ENST00000481910 MCOLN1Q9GZU1 580 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.01□□□□□ -0.33
HPS4-212ENST00000481910 RNF208Q9H0X6 261 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 CSRNP2Q9H175 543 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 DISC1Q9NRI5 854 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 TELO2Q9Y4R8 837 aa13.01□□□□□ -0.33
HPS4-212ENST00000481910 ELP1O95163 1332 aa13□□□□□ -0.33
HPS4-212ENST00000481910 POTEFA5A3E0 1075 aa13□□□□□ -0.33
HPS4-212ENST00000481910 WDR64B1ANS9 1081 aa13□□□□□ -0.33
HPS4-212ENST00000481910 EML1O00423 815 aa13□□□□□ -0.33
HPS4-212ENST00000481910 CUTAO60888 179 aa13□□□□□ -0.33
HPS4-212ENST00000481910 CCL5P13501 91 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms