RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ARHGAP4P98171 946 aa21.27■■□□□ 1
CLK1-211ENST00000481641 MTMR1Q13613 665 aa21.27■■□□□ 1
CLK1-211ENST00000481641 KRT32Q14532 448 aa21.27■■□□□ 1
CLK1-211ENST00000481641 GIMAP8Q8ND71 665 aaPredicted RBP21.27■■□□□ 1
CLK1-211ENST00000481641 CYP2W1Q8TAV3 490 aa21.27■■□□□ 1
CLK1-211ENST00000481641 LMBR1Q8WVP7 490 aa21.27■■□□□ 1
CLK1-211ENST00000481641 CCDC136Q96JN2 1154 aa21.27■■□□□ 1
CLK1-211ENST00000481641 JADE2Q9NQC1 790 aa21.27■■□□□ 1
CLK1-211ENST00000481641 MTCH2Q9Y6C9 303 aa21.27■■□□□ 1
CLK1-211ENST00000481641 KAT6AQ92794 2004 aa21.27■■□□□ 1
CLK1-211ENST00000481641 TTC28Q96AY4 2481 aa21.27■□□□□ 0.99
CLK1-211ENST00000481641 STXBP3O00186 592 aa21.26■□□□□ 0.99
CLK1-211ENST00000481641 MARK3P27448 753 aa21.26■□□□□ 0.99
CLK1-211ENST00000481641 ADAM17P78536 824 aa21.26■□□□□ 0.99
CLK1-211ENST00000481641 TJAP1Q5JTD0 557 aa21.26■□□□□ 0.99
CLK1-211ENST00000481641 SEPT1Q8WYJ6 367 aa21.26■□□□□ 0.99
CLK1-211ENST00000481641 CDHR1Q96JP9 859 aa21.26■□□□□ 0.99
CLK1-211ENST00000481641 RIC8AQ9NPQ8 531 aa21.26■□□□□ 0.99
CLK1-211ENST00000481641 TMEM260Q9NX78 707 aa21.26■□□□□ 0.99
CLK1-211ENST00000481641 THEGQ9P2T0 379 aa21.26■□□□□ 0.99
CLK1-211ENST00000481641 GJB5O95377 273 aa21.25■□□□□ 0.99
CLK1-211ENST00000481641 GNAT1P11488 350 aa21.25■□□□□ 0.99
CLK1-211ENST00000481641 ADD1P35611 737 aaKnown RBP21.25■□□□□ 0.99
CLK1-211ENST00000481641 APOBRQ0VD83 1088 aa21.25■□□□□ 0.99
CLK1-211ENST00000481641 PLEKHG4Q58EX7 1191 aa21.25■□□□□ 0.99
CLK1-211ENST00000481641 RUFY4Q6ZNE9 571 aa21.25■□□□□ 0.99
CLK1-211ENST00000481641 Q6ZUG5 572 aa21.25■□□□□ 0.99
CLK1-211ENST00000481641 JAKMIP1Q96N16 626 aaKnown RBP21.25■□□□□ 0.99
CLK1-211ENST00000481641 SNX14Q9Y5W7 946 aa21.25■□□□□ 0.99
CLK1-211ENST00000481641 EMSYQ7Z589 1322 aa21.25■□□□□ 0.99
CLK1-211ENST00000481641 MICAL3Q7RTP6 2002 aa21.24■□□□□ 0.99
CLK1-211ENST00000481641 SMCO2A6NFE2 343 aa21.24■□□□□ 0.99
CLK1-211ENST00000481641 EFCAB14O75071 495 aa21.24■□□□□ 0.99
CLK1-211ENST00000481641 ADCY7P51828 1080 aa21.24■□□□□ 0.99
CLK1-211ENST00000481641 FGD1P98174 961 aa21.24■□□□□ 0.99
CLK1-211ENST00000481641 GRB10Q13322 594 aa21.24■□□□□ 0.99
CLK1-211ENST00000481641 KCNB2Q92953 911 aa21.24■□□□□ 0.99
CLK1-211ENST00000481641 RAD9AQ99638 391 aa21.24■□□□□ 0.99
CLK1-211ENST00000481641 MXRA8Q9BRK3 442 aa21.24■□□□□ 0.99
CLK1-211ENST00000481641 ANO3Q9BYT9 981 aa21.24■□□□□ 0.99
CLK1-211ENST00000481641 EHMT1Q9H9B1 1298 aa21.24■□□□□ 0.99
CLK1-211ENST00000481641 MTUS1Q9ULD2 1270 aa21.24■□□□□ 0.99
CLK1-211ENST00000481641 GTPBP6O43824 516 aaPredicted RBP21.23■□□□□ 0.99
CLK1-211ENST00000481641 HMGB1P09429 215 aaKnown RBP21.23■□□□□ 0.99
CLK1-211ENST00000481641 ARP10275 920 aa21.23■□□□□ 0.99
CLK1-211ENST00000481641 MKRN4PQ13434 485 aaPredicted RBP21.23■□□□□ 0.99
CLK1-211ENST00000481641 PPP1R18Q6NYC8 613 aa21.23■□□□□ 0.99
CLK1-211ENST00000481641 MYOCDQ8IZQ8 938 aa21.23■□□□□ 0.99
CLK1-211ENST00000481641 ATXN2LQ8WWM7 1075 aaKnown RBP21.23■□□□□ 0.99
CLK1-211ENST00000481641 SYMPKQ92797 1274 aaKnown RBP21.23■□□□□ 0.99
CLK1-211ENST00000481641 GLG1Q92896 1179 aa21.23■□□□□ 0.99
CLK1-211ENST00000481641 BRF1Q92994 677 aa21.23■□□□□ 0.99
CLK1-211ENST00000481641 ZBTB10Q96DT7 871 aa21.23■□□□□ 0.99
CLK1-211ENST00000481641 KCNH7Q9NS40 1196 aa21.23■□□□□ 0.99
CLK1-211ENST00000481641 BARHL2Q9NY43 387 aa21.23■□□□□ 0.99
CLK1-211ENST00000481641 NRCAMQ92823 1304 aa21.23■□□□□ 0.99
CLK1-211ENST00000481641 LINC01553A4QN01 128 aa21.22■□□□□ 0.99
CLK1-211ENST00000481641 ADAMTS3O15072 1205 aa21.22■□□□□ 0.99
CLK1-211ENST00000481641 LPXNO60711 386 aa21.22■□□□□ 0.99
CLK1-211ENST00000481641 POU3F3P20264 500 aaPredicted RBP21.22■□□□□ 0.99
CLK1-211ENST00000481641 HSPA4P34932 840 aa21.22■□□□□ 0.99
CLK1-211ENST00000481641 METAP2P50579 478 aaKnown RBP eCLIP21.22■□□□□ 0.99
CLK1-211ENST00000481641 PPFIA1Q13136 1202 aa21.22■□□□□ 0.99
CLK1-211ENST00000481641 SKIV2LQ15477 1246 aaKnown RBP21.22■□□□□ 0.99
CLK1-211ENST00000481641 GDPD5Q8WTR4 605 aa21.22■□□□□ 0.99
CLK1-211ENST00000481641 ASB2Q96Q27 587 aa21.22■□□□□ 0.99
CLK1-211ENST00000481641 PCYT2Q99447 389 aa21.22■□□□□ 0.99
CLK1-211ENST00000481641 COL4A4P53420 1690 aaPredicted RBP21.21■□□□□ 0.99
CLK1-211ENST00000481641 MAFGO15525 162 aa21.21■□□□□ 0.99
CLK1-211ENST00000481641 PPFIA3O75145 1194 aa21.21■□□□□ 0.99
CLK1-211ENST00000481641 CAND2O75155 1236 aa21.21■□□□□ 0.99
CLK1-211ENST00000481641 CHRNA1P02708 482 aa21.21■□□□□ 0.99
CLK1-211ENST00000481641 AMHP03971 560 aa21.21■□□□□ 0.99
CLK1-211ENST00000481641 MRPS5P82675 430 aaKnown RBP21.21■□□□□ 0.99
CLK1-211ENST00000481641 TFF2Q03403 129 aa21.21■□□□□ 0.99
CLK1-211ENST00000481641 GRIK4Q16099 956 aa21.21■□□□□ 0.99
CLK1-211ENST00000481641 JAKMIP3Q5VZ66 844 aa21.21■□□□□ 0.99
CLK1-211ENST00000481641 BLOC1S2Q6QNY1 142 aa21.21■□□□□ 0.99
CLK1-211ENST00000481641 SEPT8Q92599 483 aa21.21■□□□□ 0.99
CLK1-211ENST00000481641 JPH1Q9HDC5 661 aaPredicted RBP21.21■□□□□ 0.99
CLK1-211ENST00000481641 ERAP1Q9NZ08 941 aa21.21■□□□□ 0.99
CLK1-211ENST00000481641 SLC9A2Q9UBY0 812 aa21.21■□□□□ 0.99
CLK1-211ENST00000481641 FOSP01100 380 aaPredicted RBP21.2■□□□□ 0.98
CLK1-211ENST00000481641 CLK2P49760 499 aaKnown RBP21.2■□□□□ 0.98
CLK1-211ENST00000481641 IGBP1P78318 339 aa21.2■□□□□ 0.98
CLK1-211ENST00000481641 FAM26DQ5JW98 314 aa21.2■□□□□ 0.98
CLK1-211ENST00000481641 MARCH8Q5T0T0 291 aa21.2■□□□□ 0.98
CLK1-211ENST00000481641 UIMC1Q96RL1 719 aa21.2■□□□□ 0.98
CLK1-211ENST00000481641 SMARCAD1Q9H4L7 1026 aa21.2■□□□□ 0.98
CLK1-211ENST00000481641 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.19■□□□□ 0.98
CLK1-211ENST00000481641 hCG_1984214I3L0E3 225 aa21.19■□□□□ 0.98
CLK1-211ENST00000481641 UPP2O95045 317 aa21.19■□□□□ 0.98
CLK1-211ENST00000481641 RCAN1P53805 252 aa21.19■□□□□ 0.98
CLK1-211ENST00000481641 ERVK-21P61565 698 aa21.19■□□□□ 0.98
CLK1-211ENST00000481641 ITGB3BPQ13352 177 aaPredicted RBP21.19■□□□□ 0.98
CLK1-211ENST00000481641 PFKFB3Q16875 520 aaPredicted RBP21.19■□□□□ 0.98
CLK1-211ENST00000481641 CEP55Q53EZ4 464 aa21.19■□□□□ 0.98
CLK1-211ENST00000481641 ZNF713Q8N859 430 aaPredicted RBP21.19■□□□□ 0.98
CLK1-211ENST00000481641 DNAJB3Q8WWF6 145 aa21.19■□□□□ 0.98
CLK1-211ENST00000481641 TGS1Q96RS0 853 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms