RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 EPHA10Q5JZY3 1008 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 EP400NLQ6ZTU2 488 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 ZNF579Q8NAF0 562 aaKnown RBP10.28□□□□□ -0.76
GARNL3-216ENST00000481242 KRT12Q99456 494 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 TTC1Q99614 292 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 HOMER3Q9NSC5 361 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 CPSF3Q9UKF6 684 aaKnown RBP10.28□□□□□ -0.76
GARNL3-216ENST00000481242 ANXA13P27216 316 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 ETF1P62495 437 aaKnown RBP10.28□□□□□ -0.76
GARNL3-216ENST00000481242 SPP2Q13103 211 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 PPP2R5DQ14738 602 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 MAPK6Q16659 721 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 TKFCQ3LXA3 575 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 SNRNP48Q6IEG0 339 aaKnown RBP10.28□□□□□ -0.76
GARNL3-216ENST00000481242 FAM84BQ96KN1 310 aaPredicted RBP10.28□□□□□ -0.76
GARNL3-216ENST00000481242 VPS37BQ9H9H4 285 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 ATP6V0A4Q9HBG4 840 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 PCDHA6Q9UN73 950 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 PCDHA8Q9Y5H6 950 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 CNTNAP4Q9C0A0 1308 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 FCER1AP12319 257 aa10.27□□□□□ -0.76
GARNL3-216ENST00000481242 U2AF2P26368 475 aaKnown RBP eCLIP10.27□□□□□ -0.76
GARNL3-216ENST00000481242 AFAP1L1Q8TED9 768 aa10.27□□□□□ -0.76
GARNL3-216ENST00000481242 PASKQ96RG2 1323 aa10.27□□□□□ -0.76
GARNL3-216ENST00000481242 F5H6K3 240 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 SORBS3O60504 671 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 TBC1D8O95759 1140 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 ARL4AP40617 200 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 ADKP55263 362 aaKnown RBP10.27□□□□□ -0.77
GARNL3-216ENST00000481242 KLRC3Q07444 240 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 NR5A1Q13285 461 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 GRM4Q14833 912 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 BRD3Q15059 726 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 ZNF827Q17R98 1081 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 SPATS2Q86XZ4 545 aaKnown RBP10.27□□□□□ -0.77
GARNL3-216ENST00000481242 CTAGE3PQ8IX95 158 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 CYP2D7A0A087X1C5 515 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 CIITAP33076 1130 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 ADCY8P40145 1251 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 PRELPP51888 382 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 GPSM2P81274 684 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 KYAT1Q16773 422 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 FAM83BQ5T0W9 1011 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 BZW1Q7L1Q6 419 aaKnown RBP10.27□□□□□ -0.77
GARNL3-216ENST00000481242 PSPC1Q8WXF1 523 aaKnown RBP10.27□□□□□ -0.77
GARNL3-216ENST00000481242 CALR3Q96L12 384 aaKnown RBP10.27□□□□□ -0.77
GARNL3-216ENST00000481242 DDX41Q9UJV9 622 aaKnown RBP10.27□□□□□ -0.77
GARNL3-216ENST00000481242 KCNQ2O43526 872 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 PPFIA4O75335 1185 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 STAT3P40763 770 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 GARSP41250 739 aaKnown RBP10.27□□□□□ -0.77
GARNL3-216ENST00000481242 ZSCAN26Q16670 478 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 STYK1Q6J9G0 422 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 HHIPL2Q6UWX4 724 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 LRRC8AQ8IWT6 810 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 ZNF34Q8IZ26 560 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 ZNF512BQ96KM6 892 aaPredicted RBP10.27□□□□□ -0.77
GARNL3-216ENST00000481242 BCL2L12Q9HB09 334 aa10.27□□□□□ -0.77
GARNL3-216ENST00000481242 BCORL1Q5H9F3 1711 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 PVALEFA0A1B0GWK0 134 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 CCDC170Q8IYT3 715 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 PROM2Q8N271 834 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 NME8Q8N427 588 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 CCHCR1Q8TD31 782 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 ZNF148Q9UQR1 794 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 PLCG1P19174 1290 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 USP11P51784 963 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 TPD52P55327 224 aaPredicted RBP10.26□□□□□ -0.77
GARNL3-216ENST00000481242 APBA1Q02410 837 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 KRT71Q3SY84 523 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 EEPD1Q7L9B9 569 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 SDCCAG8Q86SQ7 713 aaPredicted RBP10.26□□□□□ -0.77
GARNL3-216ENST00000481242 SIX6OS1Q8N1H7 587 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 RNF139Q8WU17 664 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 STMN2Q93045 179 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 MSTO1Q9BUK6 570 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 BHMT2Q9H2M3 363 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 P4HBP07237 508 aaKnown RBP10.26□□□□□ -0.77
GARNL3-216ENST00000481242 ELF2Q15723 593 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 CCDC62Q6P9F0 684 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 TBC1D16Q8TBP0 767 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.26□□□□□ -0.77
GARNL3-216ENST00000481242 WDR70Q9NW82 654 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 SPATA31A5Q5VU36 1347 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 SPATA31A7Q8IWB4 1347 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 FRMPD1Q5SYB0 1578 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 NRKQ7Z2Y5 1582 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 NBPF26B4DH59 902 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 ARHGAP25P42331 645 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 IRX5P78411 483 aaPredicted RBP10.26□□□□□ -0.77
GARNL3-216ENST00000481242 ZBED6P86452 979 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 UBE2SQ16763 222 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 NBPF10Q6P3W6 841 aaKnown RBP10.26□□□□□ -0.77
GARNL3-216ENST00000481242 UNC13DQ70J99 1090 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 SGMS1Q86VZ5 419 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 THEM5Q8N1Q8 247 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 NBPF15Q8N660 670 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 MTIF3Q9H2K0 278 aaKnown RBP10.26□□□□□ -0.77
GARNL3-216ENST00000481242 KCNH4Q9UQ05 1017 aa10.26□□□□□ -0.77
GARNL3-216ENST00000481242 RNF40O75150 1001 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms