RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 ENAHQ8N8S7 591 aaPredicted RBP10.99□□□□□ -0.65
SMARCE1-210ENST00000481231 NSUN6Q8TEA1 469 aaKnown RBP10.99□□□□□ -0.65
SMARCE1-210ENST00000481231 TAAR1Q96RJ0 339 aa10.99□□□□□ -0.65
SMARCE1-210ENST00000481231 KATNAL1Q9BW62 490 aa10.99□□□□□ -0.65
SMARCE1-210ENST00000481231 SMOC2Q9H3U7 446 aa10.99□□□□□ -0.65
SMARCE1-210ENST00000481231 ABCB11O95342 1321 aa10.99□□□□□ -0.65
SMARCE1-210ENST00000481231 ZNF292O60281 2723 aa10.99□□□□□ -0.65
SMARCE1-210ENST00000481231 ZNF213O14771 459 aa10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 SORBS3O60504 671 aa10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 NT5C2P49902 561 aa10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 QRICH1Q2TAL8 776 aa10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 ASPRV1Q53RT3 343 aa10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 IQCA1Q86XH1 822 aa10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 SMC5Q8IY18 1101 aa10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 KIAA2013Q8IYS2 634 aa10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 KREMEN2Q8NCW0 462 aa10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 CLP1Q92989 425 aaKnown RBP10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 ZSCAN10Q96SZ4 725 aaPredicted RBP10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 RMDN3Q96TC7 470 aa10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 MAF1Q9H063 256 aa10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 KAT14Q9H8E8 782 aa10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 RC3H2Q9HBD1 1191 aaKnown RBP10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 PLAGL2Q9UPG8 496 aa10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 RWDD3Q9Y3V2 267 aa10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 CFAP47Q6ZTR5 3102 aa10.98□□□□□ -0.65
SMARCE1-210ENST00000481231 B4E1Z4 1266 aa10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 BRD1O95696 1058 aa10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 ITGB1P05556 798 aa10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 ARP10275 920 aa10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 EIF2AK2P19525 551 aaKnown RBP10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 BTG3Q14201 252 aaPredicted RBP10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 STXBP2Q15833 593 aa10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 CCDC178Q5BJE1 867 aa10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 B4GALNT3Q6L9W6 998 aa10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 CWC27Q6UX04 472 aaKnown RBP10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 MCF2L2Q86YR7 1114 aa10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 PLEKHM2Q8IWE5 1019 aa10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 VN1R2Q8NFZ6 395 aa10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 SUSD6Q92537 303 aa10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 PPP2R3CQ969Q6 453 aa10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 EMID1Q96A84 441 aaPredicted RBP10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 IWS1Q96ST2 819 aa10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 JMJD4Q9H9V9 463 aa10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 DDX41Q9UJV9 622 aaKnown RBP10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 MRPL11Q9Y3B7 192 aaKnown RBP10.97□□□□□ -0.65
SMARCE1-210ENST00000481231 OPLAHO14841 1288 aa10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 PER2O15055 1255 aa10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 DHX16O60231 1041 aaKnown RBP10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 EIF3JO75822 258 aaKnown RBP10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 PARP1P09874 1014 aaKnown RBP10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 ATF7P17544 494 aaPredicted RBP10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 ARHGEF16Q5VV41 709 aa10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 ASTLQ6HA08 431 aaPredicted RBP10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 CHD1LQ86WJ1 897 aa10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 ATP6V0A1Q93050 837 aa10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 APOL5Q9BWW9 433 aa10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 OSBPL3Q9H4L5 887 aa10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 VAT1LQ9HCJ6 419 aa10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 PXMP2Q9NR77 195 aa10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 DIAPH3Q9NSV4 1193 aa10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 ZSWIM5Q9P217 1185 aa10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 MRVI1Q9Y6F6 885 aa10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 MRPL42Q9Y6G3 142 aaKnown RBP10.96□□□□□ -0.65
SMARCE1-210ENST00000481231 TPRP12270 2363 aaKnown RBP10.96□□□□□ -0.66
SMARCE1-210ENST00000481231 EP300Q09472 2414 aaPredicted RBP10.95□□□□□ -0.66
SMARCE1-210ENST00000481231 TREHO43280 583 aa10.95□□□□□ -0.66
SMARCE1-210ENST00000481231 CFBP00751 764 aa10.95□□□□□ -0.66
SMARCE1-210ENST00000481231 NR3C2P08235 984 aa10.95□□□□□ -0.66
SMARCE1-210ENST00000481231 NUCB1Q02818 461 aa10.95□□□□□ -0.66
SMARCE1-210ENST00000481231 MTMR3Q13615 1198 aa10.95□□□□□ -0.66
SMARCE1-210ENST00000481231 LAMC2Q13753 1193 aa10.95□□□□□ -0.66
SMARCE1-210ENST00000481231 PPTC7Q8NI37 304 aa10.95□□□□□ -0.66
SMARCE1-210ENST00000481231 SPPL3Q8TCT6 385 aa10.95□□□□□ -0.66
SMARCE1-210ENST00000481231 KCNG4Q8TDN1 519 aa10.95□□□□□ -0.66
SMARCE1-210ENST00000481231 POF1BQ8WVV4 589 aa10.95□□□□□ -0.66
SMARCE1-210ENST00000481231 DSCC1Q9BVC3 393 aa10.95□□□□□ -0.66
SMARCE1-210ENST00000481231 PLVAPQ9BX97 442 aa10.95□□□□□ -0.66
SMARCE1-210ENST00000481231 RWDD1Q9H446 243 aaPredicted RBP10.95□□□□□ -0.66
SMARCE1-210ENST00000481231 TSHZ2Q9NRE2 1034 aa10.95□□□□□ -0.66
SMARCE1-210ENST00000481231 CDH22Q9UJ99 828 aa10.95□□□□□ -0.66
SMARCE1-210ENST00000481231 ACACBO00763 2458 aa10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 FRYLO94915 3013 aa10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 C17orf102A2RUQ5 167 aa10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 PPP1R11O60927 126 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 IGHDP01880 384 aa10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 HOXD8P13378 290 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 HSD17B4P51659 736 aa10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 GHRHRQ02643 423 aa10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 PUM1Q14671 1186 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 IMMTQ16891 758 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 STAG2Q8N3U4 1231 aa10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 KLHL23Q8NBE8 558 aa10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 APBB2Q92870 758 aa10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 ZNF689Q96CS4 500 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 UBAC1Q9BSL1 405 aa10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 AMNQ9BXJ7 453 aa10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 MFSD1Q9H3U5 465 aa10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 TLE6Q9H808 572 aa10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 SORCS3Q9UPU3 1222 aa10.94□□□□□ -0.66
SMARCE1-210ENST00000481231 BAHCC1Q9P281 2608 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms