RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 HSPBP1Q9NZL4 362 aa7.61□□□□□ -1.19
CALD1-219ENST00000480638 KCNK3O14649 394 aa7.6□□□□□ -1.19
CALD1-219ENST00000480638 DLX2Q07687 328 aaPredicted RBP7.6□□□□□ -1.19
CALD1-219ENST00000480638 TMEM177Q53S58 311 aa7.6□□□□□ -1.19
CALD1-219ENST00000480638 HHIPL2Q6UWX4 724 aa7.6□□□□□ -1.19
CALD1-219ENST00000480638 SAPCD2Q86UD0 394 aa7.6□□□□□ -1.19
CALD1-219ENST00000480638 PROSER1Q86XN7 944 aa7.6□□□□□ -1.19
CALD1-219ENST00000480638 NINJ1Q92982 152 aa7.6□□□□□ -1.19
CALD1-219ENST00000480638 ZBTB8AQ96BR9 441 aa7.6□□□□□ -1.19
CALD1-219ENST00000480638 INTS7Q9NVH2 962 aaKnown RBP7.6□□□□□ -1.19
CALD1-219ENST00000480638 SAMD15Q9P1V8 674 aa7.6□□□□□ -1.19
CALD1-219ENST00000480638 MAGEC2Q9UBF1 373 aaPredicted RBP7.6□□□□□ -1.19
CALD1-219ENST00000480638 WASF3Q9UPY6 502 aa7.6□□□□□ -1.19
CALD1-219ENST00000480638 ATP23Q9Y6H3 246 aa7.6□□□□□ -1.19
CALD1-219ENST00000480638 ACOT7O00154 380 aa7.59□□□□□ -1.19
CALD1-219ENST00000480638 FFAR3O14843 346 aa7.59□□□□□ -1.19
CALD1-219ENST00000480638 GLRX3O76003 335 aaKnown RBP7.59□□□□□ -1.19
CALD1-219ENST00000480638 ZSCAN22P10073 491 aaPredicted RBP7.59□□□□□ -1.19
CALD1-219ENST00000480638 PTPN1P18031 435 aaKnown RBP7.59□□□□□ -1.19
CALD1-219ENST00000480638 SMAD4Q13485 552 aaKnown RBP7.59□□□□□ -1.19
CALD1-219ENST00000480638 SDE2Q6IQ49 451 aa7.59□□□□□ -1.19
CALD1-219ENST00000480638 DDX53Q86TM3 631 aaKnown RBP7.59□□□□□ -1.19
CALD1-219ENST00000480638 STK32CQ86UX6 486 aa7.59□□□□□ -1.19
CALD1-219ENST00000480638 NOSTRINQ8IVI9 506 aa7.59□□□□□ -1.19
CALD1-219ENST00000480638 NIM1KQ8IY84 436 aa7.59□□□□□ -1.19
CALD1-219ENST00000480638 KYQ8NBH2 561 aa7.59□□□□□ -1.19
CALD1-219ENST00000480638 RBPJLQ9UBG7 517 aa7.59□□□□□ -1.19
CALD1-219ENST00000480638 PLAAQ9Y263 795 aa7.59□□□□□ -1.19
CALD1-219ENST00000480638 FAM90A27PA6NNH2 459 aa7.58□□□□□ -1.2
CALD1-219ENST00000480638 CLASP2O75122 1294 aaKnown RBP7.58□□□□□ -1.2
CALD1-219ENST00000480638 GJA4P35212 333 aa7.58□□□□□ -1.2
CALD1-219ENST00000480638 ADAM9Q13443 819 aa7.58□□□□□ -1.2
CALD1-219ENST00000480638 VMACQ2NL98 169 aa7.58□□□□□ -1.2
CALD1-219ENST00000480638 KRTAP19-4Q3LI73 84 aa7.58□□□□□ -1.2
CALD1-219ENST00000480638 PLEKHG4Q58EX7 1191 aa7.58□□□□□ -1.2
CALD1-219ENST00000480638 DALRD3Q5D0E6 543 aaKnown RBP7.58□□□□□ -1.2
CALD1-219ENST00000480638 BTBD8Q5XKL5 378 aa7.58□□□□□ -1.2
CALD1-219ENST00000480638 FSTL4Q6MZW2 842 aa7.58□□□□□ -1.2
CALD1-219ENST00000480638 TMC5Q6UXY8 1006 aa7.58□□□□□ -1.2
CALD1-219ENST00000480638 LCNL1Q6ZST4 164 aa7.58□□□□□ -1.2
CALD1-219ENST00000480638 EP400NLQ6ZTU2 488 aa7.58□□□□□ -1.2
CALD1-219ENST00000480638 LINC01356Q8N9X3 169 aa7.58□□□□□ -1.2
CALD1-219ENST00000480638 SH3D21A4FU49 640 aa7.57□□□□□ -1.2
CALD1-219ENST00000480638 M0R2C6 588 aa7.57□□□□□ -1.2
CALD1-219ENST00000480638 THBS2P35442 1172 aa7.57□□□□□ -1.2
CALD1-219ENST00000480638 FLT3P36888 993 aa7.57□□□□□ -1.2
CALD1-219ENST00000480638 MECP2P51608 486 aaKnown RBP7.57□□□□□ -1.2
CALD1-219ENST00000480638 PIK3R6Q5UE93 754 aa7.57□□□□□ -1.2
CALD1-219ENST00000480638 CD276Q5ZPR3 534 aa7.57□□□□□ -1.2
CALD1-219ENST00000480638 LIPIQ6XZB0 460 aa7.57□□□□□ -1.2
CALD1-219ENST00000480638 TTLL6Q8N841 843 aa7.57□□□□□ -1.2
CALD1-219ENST00000480638 TP53I13Q8NBR0 393 aaPredicted RBP7.57□□□□□ -1.2
CALD1-219ENST00000480638 ZNF526Q8TF50 670 aaPredicted RBP7.57□□□□□ -1.2
CALD1-219ENST00000480638 ZSWIM3Q96MP5 696 aa7.57□□□□□ -1.2
CALD1-219ENST00000480638 TMEM209Q96SK2 561 aa7.57□□□□□ -1.2
CALD1-219ENST00000480638 RIC8BQ9NVN3 520 aa7.57□□□□□ -1.2
CALD1-219ENST00000480638 SPATA6Q9NWH7 488 aaPredicted RBP7.57□□□□□ -1.2
CALD1-219ENST00000480638 SMARCA5O60264 1052 aaPredicted RBP7.56□□□□□ -1.2
CALD1-219ENST00000480638 JMJD7P0C870 316 aa7.56□□□□□ -1.2
CALD1-219ENST00000480638 CPZQ66K79 652 aa7.56□□□□□ -1.2
CALD1-219ENST00000480638 VASNQ6EMK4 673 aa7.56□□□□□ -1.2
CALD1-219ENST00000480638 SIAH1Q8IUQ4 282 aa7.56□□□□□ -1.2
CALD1-219ENST00000480638 DHX37Q8IY37 1157 aaKnown RBP7.56□□□□□ -1.2
CALD1-219ENST00000480638 ADGRG2Q8IZP9 1017 aa7.56□□□□□ -1.2
CALD1-219ENST00000480638 C2orf69Q8N8R5 385 aa7.56□□□□□ -1.2
CALD1-219ENST00000480638 MFSD3Q96ES6 412 aa7.56□□□□□ -1.2
CALD1-219ENST00000480638 A0A1B0GTL3 188 aa7.55□□□□□ -1.2
CALD1-219ENST00000480638 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.55□□□□□ -1.2
CALD1-219ENST00000480638 SLC12A8A0AV02 714 aa7.55□□□□□ -1.2
CALD1-219ENST00000480638 FAM83GA6ND36 823 aa7.55□□□□□ -1.2
CALD1-219ENST00000480638 SCDO00767 359 aa7.55□□□□□ -1.2
CALD1-219ENST00000480638 C4BPAP04003 597 aaKnown RBP7.55□□□□□ -1.2
CALD1-219ENST00000480638 HSD3B2P26439 372 aa7.55□□□□□ -1.2
CALD1-219ENST00000480638 SEC23AQ15436 765 aa7.55□□□□□ -1.2
CALD1-219ENST00000480638 TM4SF20Q53R12 229 aa7.55□□□□□ -1.2
CALD1-219ENST00000480638 LCE3BQ5TA77 95 aa7.55□□□□□ -1.2
CALD1-219ENST00000480638 CDCA2Q69YH5 1023 aaPredicted RBP7.55□□□□□ -1.2
CALD1-219ENST00000480638 UBE2R2Q712K3 238 aaPredicted RBP7.55□□□□□ -1.2
CALD1-219ENST00000480638 OTOP1Q7RTM1 612 aa7.55□□□□□ -1.2
CALD1-219ENST00000480638 LRRTM3Q86VH5 581 aa7.55□□□□□ -1.2
CALD1-219ENST00000480638 DTX3Q8N9I9 347 aa7.55□□□□□ -1.2
CALD1-219ENST00000480638 CHST14Q8NCH0 376 aa7.55□□□□□ -1.2
CALD1-219ENST00000480638 DLL4Q9NR61 685 aa7.55□□□□□ -1.2
CALD1-219ENST00000480638 PRAMEF25A6NGN4 478 aa7.54□□□□□ -1.2
CALD1-219ENST00000480638 RTP5Q14D33 572 aa7.54□□□□□ -1.2
CALD1-219ENST00000480638 CFAP100Q494V2 611 aa7.54□□□□□ -1.2
CALD1-219ENST00000480638 PRR31Q5SQ13 230 aa7.54□□□□□ -1.2
CALD1-219ENST00000480638 CLIC6Q96NY7 704 aa7.54□□□□□ -1.2
CALD1-219ENST00000480638 BOCQ9BWV1 1114 aa7.54□□□□□ -1.2
CALD1-219ENST00000480638 NTMQ9P121 344 aa7.54□□□□□ -1.2
CALD1-219ENST00000480638 ZNF839A8K0R7 811 aa7.53□□□□□ -1.2
CALD1-219ENST00000480638 CBX4O00257 560 aa7.53□□□□□ -1.2
CALD1-219ENST00000480638 TRAF5O00463 557 aa7.53□□□□□ -1.2
CALD1-219ENST00000480638 TRIM13O60858 407 aa7.53□□□□□ -1.2
CALD1-219ENST00000480638 ENO2P09104 434 aaPredicted RBP7.53□□□□□ -1.2
CALD1-219ENST00000480638 POU3F2P20265 443 aaPredicted RBP7.53□□□□□ -1.2
CALD1-219ENST00000480638 RPL13P26373 211 aaKnown RBP7.53□□□□□ -1.2
CALD1-219ENST00000480638 IRF9Q00978 393 aa7.53□□□□□ -1.2
CALD1-219ENST00000480638 DBPQ10586 325 aaPredicted RBP7.53□□□□□ -1.2
CALD1-219ENST00000480638 FZD5Q13467 585 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms