RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 C16orf70Q9BSU1 422 aa17.13■□□□□ 0.33
ABCF3-213ENST00000480539 KATNAL1Q9BW62 490 aa17.13■□□□□ 0.33
ABCF3-213ENST00000480539 TEKT3Q9BXF9 490 aa17.13■□□□□ 0.33
ABCF3-213ENST00000480539 KCNMB3Q9NPA1 279 aa17.13■□□□□ 0.33
ABCF3-213ENST00000480539 TBC1D22BQ9NU19 505 aa17.13■□□□□ 0.33
ABCF3-213ENST00000480539 NEMFO60524 1076 aa17.12■□□□□ 0.33
ABCF3-213ENST00000480539 PPFIA4O75335 1185 aa17.12■□□□□ 0.33
ABCF3-213ENST00000480539 MCM7P33993 719 aa17.12■□□□□ 0.33
ABCF3-213ENST00000480539 TLE2Q04725 743 aa17.12■□□□□ 0.33
ABCF3-213ENST00000480539 KIAA0753Q2KHM9 967 aa17.12■□□□□ 0.33
ABCF3-213ENST00000480539 TTC38Q5R3I4 469 aa17.12■□□□□ 0.33
ABCF3-213ENST00000480539 C1orf53Q5VUE5 145 aa17.12■□□□□ 0.33
ABCF3-213ENST00000480539 SLC43A3Q8NBI5 491 aa17.12■□□□□ 0.33
ABCF3-213ENST00000480539 UNC45AQ9H3U1 944 aa17.12■□□□□ 0.33
ABCF3-213ENST00000480539 NOL7Q9UMY1 257 aaKnown RBP17.12■□□□□ 0.33
ABCF3-213ENST00000480539 DNAH12Q6ZR08 3092 aa17.12■□□□□ 0.33
ABCF3-213ENST00000480539 PSMD10O75832 226 aa17.11■□□□□ 0.33
ABCF3-213ENST00000480539 SYT1P21579 422 aa17.11■□□□□ 0.33
ABCF3-213ENST00000480539 MARK3P27448 753 aa17.11■□□□□ 0.33
ABCF3-213ENST00000480539 KRT76Q01546 638 aa17.11■□□□□ 0.33
ABCF3-213ENST00000480539 ZNF746Q6NUN9 644 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-213ENST00000480539 FERMT3Q86UX7 667 aa17.11■□□□□ 0.33
ABCF3-213ENST00000480539 HAS1Q92839 578 aa17.11■□□□□ 0.33
ABCF3-213ENST00000480539 PCYT2Q99447 389 aa17.11■□□□□ 0.33
ABCF3-213ENST00000480539 RIT2Q99578 217 aa17.11■□□□□ 0.33
ABCF3-213ENST00000480539 PRDM5Q9NQX1 630 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-213ENST00000480539 PDLIM7Q9NR12 457 aa17.11■□□□□ 0.33
ABCF3-213ENST00000480539 ZNF215Q9UL58 517 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-213ENST00000480539 ZMYND8Q9ULU4 1186 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-213ENST00000480539 MROH7Q68CQ1 1323 aa17.11■□□□□ 0.33
ABCF3-213ENST00000480539 EMSYQ7Z589 1322 aa17.11■□□□□ 0.33
ABCF3-213ENST00000480539 H3BRB1 525 aa17.1■□□□□ 0.33
ABCF3-213ENST00000480539 HAS3O00219 553 aa17.1■□□□□ 0.33
ABCF3-213ENST00000480539 MARCH6O60337 910 aa17.1■□□□□ 0.33
ABCF3-213ENST00000480539 B4GALT4O60513 344 aa17.1■□□□□ 0.33
ABCF3-213ENST00000480539 SUPT20HL2P0C7V6 817 aa17.1■□□□□ 0.33
ABCF3-213ENST00000480539 SYN1P17600 705 aa17.1■□□□□ 0.33
ABCF3-213ENST00000480539 CDK7P50613 346 aa17.1■□□□□ 0.33
ABCF3-213ENST00000480539 ZNF174Q15697 407 aa17.1■□□□□ 0.33
ABCF3-213ENST00000480539 CALCRLQ16602 461 aa17.1■□□□□ 0.33
ABCF3-213ENST00000480539 ABHD15Q6UXT9 468 aa17.1■□□□□ 0.33
ABCF3-213ENST00000480539 ANKRD33Q7Z3H0 272 aa17.1■□□□□ 0.33
ABCF3-213ENST00000480539 CCDC60Q8IWA6 550 aaPredicted RBP17.1■□□□□ 0.33
ABCF3-213ENST00000480539 FAM126BQ8IXS8 530 aa17.1■□□□□ 0.33
ABCF3-213ENST00000480539 GLG1Q92896 1179 aa17.1■□□□□ 0.33
ABCF3-213ENST00000480539 TUT1Q9H6E5 874 aaKnown RBP17.1■□□□□ 0.33
ABCF3-213ENST00000480539 SAMM50Q9Y512 469 aa17.1■□□□□ 0.33
ABCF3-213ENST00000480539 DCDC2CA8MYV0 355 aa17.09■□□□□ 0.33
ABCF3-213ENST00000480539 WDR64B1ANS9 1081 aa17.09■□□□□ 0.33
ABCF3-213ENST00000480539 BACH1O14867 736 aa17.09■□□□□ 0.33
ABCF3-213ENST00000480539 LGR5O75473 907 aa17.09■□□□□ 0.33
ABCF3-213ENST00000480539 CLTBP09497 229 aa17.09■□□□□ 0.33
ABCF3-213ENST00000480539 TRAPPC10P48553 1259 aa17.09■□□□□ 0.33
ABCF3-213ENST00000480539 TOB1P50616 345 aaPredicted RBP17.09■□□□□ 0.33
ABCF3-213ENST00000480539 MIS18BP1Q6P0N0 1132 aa17.09■□□□□ 0.33
ABCF3-213ENST00000480539 NFRKBQ6P4R8 1299 aa17.09■□□□□ 0.33
ABCF3-213ENST00000480539 SMAP1Q8IYB5 467 aaPredicted RBP17.09■□□□□ 0.33
ABCF3-213ENST00000480539 C7orf31Q8N865 590 aa17.09■□□□□ 0.33
ABCF3-213ENST00000480539 TRPV6Q9H1D0 765 aa17.09■□□□□ 0.33
ABCF3-213ENST00000480539 TMEM60Q9H2L4 133 aa17.09■□□□□ 0.33
ABCF3-213ENST00000480539 AZI2Q9H6S1 392 aa17.09■□□□□ 0.33
ABCF3-213ENST00000480539 TRMT13Q9NUP7 481 aaKnown RBP17.09■□□□□ 0.33
ABCF3-213ENST00000480539 HDAC6Q9UBN7 1215 aa17.09■□□□□ 0.33
ABCF3-213ENST00000480539 VAV3Q9UKW4 847 aa17.09■□□□□ 0.33
ABCF3-213ENST00000480539 PCDHB6Q9Y5E3 794 aa17.09■□□□□ 0.33
ABCF3-213ENST00000480539 TBX3O15119 743 aa17.08■□□□□ 0.32
ABCF3-213ENST00000480539 TLR3O15455 904 aaKnown RBP17.08■□□□□ 0.32
ABCF3-213ENST00000480539 STX6O43752 255 aa17.08■□□□□ 0.32
ABCF3-213ENST00000480539 ATG7O95352 703 aa17.08■□□□□ 0.32
ABCF3-213ENST00000480539 SMIM10L2AP0DMW4 78 aa17.08■□□□□ 0.32
ABCF3-213ENST00000480539 SMIM10L2BP0DMW5 78 aa17.08■□□□□ 0.32
ABCF3-213ENST00000480539 FAAP100Q0VG06 881 aa17.08■□□□□ 0.32
ABCF3-213ENST00000480539 BECN1Q14457 450 aa17.08■□□□□ 0.32
ABCF3-213ENST00000480539 MIER3Q7Z3K6 550 aa17.08■□□□□ 0.32
ABCF3-213ENST00000480539 SH3RF1Q7Z6J0 888 aa17.08■□□□□ 0.32
ABCF3-213ENST00000480539 SLFN12Q8IYM2 578 aa17.08■□□□□ 0.32
ABCF3-213ENST00000480539 FAM20AQ96MK3 541 aa17.08■□□□□ 0.32
ABCF3-213ENST00000480539 DISC1Q9NRI5 854 aa17.08■□□□□ 0.32
ABCF3-213ENST00000480539 GTF2IRD1Q9UHL9 959 aa17.08■□□□□ 0.32
ABCF3-213ENST00000480539 MTMR6Q9Y217 621 aa17.08■□□□□ 0.32
ABCF3-213ENST00000480539 NR2E3Q9Y5X4 410 aa17.08■□□□□ 0.32
ABCF3-213ENST00000480539 IGSF9BQ9UPX0 1349 aa17.07■□□□□ 0.32
ABCF3-213ENST00000480539 BAG4O95429 457 aaKnown RBP17.07■□□□□ 0.32
ABCF3-213ENST00000480539 CD4P01730 458 aa17.07■□□□□ 0.32
ABCF3-213ENST00000480539 PSAPP07602 524 aa17.07■□□□□ 0.32
ABCF3-213ENST00000480539 JAK3P52333 1124 aa17.07■□□□□ 0.32
ABCF3-213ENST00000480539 RESTQ13127 1097 aa17.07■□□□□ 0.32
ABCF3-213ENST00000480539 FAM160B1Q5W0V3 765 aa17.07■□□□□ 0.32
ABCF3-213ENST00000480539 NCAPH2Q6IBW4 605 aa17.07■□□□□ 0.32
ABCF3-213ENST00000480539 GDF6Q6KF10 455 aaPredicted RBP17.07■□□□□ 0.32
ABCF3-213ENST00000480539 SWSAP1Q6NVH7 229 aa17.07■□□□□ 0.32
ABCF3-213ENST00000480539 B3GNT9Q6UX72 402 aa17.07■□□□□ 0.32
ABCF3-213ENST00000480539 BRAPQ7Z569 592 aa17.07■□□□□ 0.32
ABCF3-213ENST00000480539 TOX2Q96NM4 488 aa17.07■□□□□ 0.32
ABCF3-213ENST00000480539 RNPEPQ9H4A4 650 aa17.07■□□□□ 0.32
ABCF3-213ENST00000480539 SMARCAD1Q9H4L7 1026 aa17.07■□□□□ 0.32
ABCF3-213ENST00000480539 ZNF302Q9NR11 478 aa17.07■□□□□ 0.32
ABCF3-213ENST00000480539 ERAP1Q9NZ08 941 aa17.07■□□□□ 0.32
ABCF3-213ENST00000480539 PCDHA10Q9Y5I2 948 aa17.07■□□□□ 0.32
ABCF3-213ENST00000480539 LTBP2Q14767 1821 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms