RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 CYP3A7-CYP3A51PA0A087WV96 503 aa13.68□□□□□ -0.22
CCM2-212ENST00000480382 H3BRB1 525 aa13.68□□□□□ -0.22
CCM2-212ENST00000480382 DHX15O43143 795 aaKnown RBP13.68□□□□□ -0.22
CCM2-212ENST00000480382 SLC37A4O43826 429 aa13.68□□□□□ -0.22
CCM2-212ENST00000480382 CCNT1O60563 726 aaKnown RBP13.68□□□□□ -0.22
CCM2-212ENST00000480382 CCNE2O96020 404 aa13.68□□□□□ -0.22
CCM2-212ENST00000480382 CYP3A7P24462 503 aa13.68□□□□□ -0.22
CCM2-212ENST00000480382 MAGEA10P43363 369 aaPredicted RBP13.68□□□□□ -0.22
CCM2-212ENST00000480382 MDM2Q00987 491 aaPredicted RBP13.68□□□□□ -0.22
CCM2-212ENST00000480382 CUL4AQ13619 759 aa13.68□□□□□ -0.22
CCM2-212ENST00000480382 SAFBQ15424 915 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCM2-212ENST00000480382 GDF6Q6KF10 455 aaPredicted RBP13.68□□□□□ -0.22
CCM2-212ENST00000480382 CHRDL2Q6WN34 429 aa13.68□□□□□ -0.22
CCM2-212ENST00000480382 C7orf31Q8N865 590 aa13.68□□□□□ -0.22
CCM2-212ENST00000480382 GJA10Q969M2 543 aa13.68□□□□□ -0.22
CCM2-212ENST00000480382 MBOAT7Q96N66 472 aa13.68□□□□□ -0.22
CCM2-212ENST00000480382 TUT1Q9H6E5 874 aaKnown RBP13.68□□□□□ -0.22
CCM2-212ENST00000480382 HDAC6Q9UBN7 1215 aa13.68□□□□□ -0.22
CCM2-212ENST00000480382 DDX25Q9UHL0 483 aaKnown RBP13.68□□□□□ -0.22
CCM2-212ENST00000480382 TBX21Q9UL17 535 aa13.68□□□□□ -0.22
CCM2-212ENST00000480382 ZNF215Q9UL58 517 aaPredicted RBP13.68□□□□□ -0.22
CCM2-212ENST00000480382 MYH9P35579 1960 aaKnown RBP13.67□□□□□ -0.22
CCM2-212ENST00000480382 KIAA0355O15063 1070 aa13.67□□□□□ -0.22
CCM2-212ENST00000480382 RAG1P15918 1043 aa13.67□□□□□ -0.22
CCM2-212ENST00000480382 ITGB8P26012 769 aa13.67□□□□□ -0.22
CCM2-212ENST00000480382 MARK3P27448 753 aa13.67□□□□□ -0.22
CCM2-212ENST00000480382 PTPN11Q06124 597 aaPredicted RBP13.67□□□□□ -0.22
CCM2-212ENST00000480382 SESTD1Q86VW0 696 aa13.67□□□□□ -0.22
CCM2-212ENST00000480382 SLC5A5Q92911 643 aa13.67□□□□□ -0.22
CCM2-212ENST00000480382 PCYT2Q99447 389 aa13.67□□□□□ -0.22
CCM2-212ENST00000480382 PPP1R12CQ9BZL4 782 aa13.67□□□□□ -0.22
CCM2-212ENST00000480382 TBC1D22BQ9NU19 505 aa13.67□□□□□ -0.22
CCM2-212ENST00000480382 GTF2IRD1Q9UHL9 959 aa13.67□□□□□ -0.22
CCM2-212ENST00000480382 TCEAL9Q9UHQ7 104 aa13.67□□□□□ -0.22
CCM2-212ENST00000480382 SMC3Q9UQE7 1217 aa13.67□□□□□ -0.22
CCM2-212ENST00000480382 KIF3AQ9Y496 699 aa13.67□□□□□ -0.22
CCM2-212ENST00000480382 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.67□□□□□ -0.22
CCM2-212ENST00000480382 UMODL1Q5DID0 1318 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 KAT6AQ92794 2004 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 KIF28PB7ZC32 967 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 K7ELQ4 463 aaPredicted RBP13.66□□□□□ -0.22
CCM2-212ENST00000480382 WNT7AO00755 349 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 LGR5O75473 907 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 SUPT20HL2P0C7V6 817 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 SMIM10L2AP0DMW4 78 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 SMIM10L2BP0DMW5 78 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 CYP2C9P11712 490 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 GCFC2P16383 781 aaKnown RBP13.66□□□□□ -0.22
CCM2-212ENST00000480382 GNL2Q13823 731 aaKnown RBP13.66□□□□□ -0.22
CCM2-212ENST00000480382 HIC1Q14526 733 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 LRCH2Q5VUJ6 765 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 PPP4R3AQ6IN85 833 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 POTEDQ86YR6 584 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 ETNPPLQ8TBG4 499 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 GLG1Q92896 1179 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 BADQ92934 168 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 NAP1L4Q99733 375 aaKnown RBP13.66□□□□□ -0.22
CCM2-212ENST00000480382 TEKT3Q9BXF9 490 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 FOXP1Q9H334 677 aaPredicted RBP13.66□□□□□ -0.22
CCM2-212ENST00000480382 NOD1Q9Y239 953 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 SCN5AQ14524 2016 aa13.66□□□□□ -0.22
CCM2-212ENST00000480382 C17orf102A2RUQ5 167 aa13.65□□□□□ -0.22
CCM2-212ENST00000480382 CHMP2AO43633 222 aa13.65□□□□□ -0.22
CCM2-212ENST00000480382 GAS7O60861 476 aa13.65□□□□□ -0.22
CCM2-212ENST00000480382 ATG7O95352 703 aa13.65□□□□□ -0.22
CCM2-212ENST00000480382 TIMP1P01033 207 aa13.65□□□□□ -0.22
CCM2-212ENST00000480382 ZNF200P98182 395 aaPredicted RBP13.65□□□□□ -0.22
CCM2-212ENST00000480382 KRT76Q01546 638 aa13.65□□□□□ -0.22
CCM2-212ENST00000480382 PTGISQ16647 500 aa13.65□□□□□ -0.22
CCM2-212ENST00000480382 ZNF746Q6NUN9 644 aaPredicted RBP13.65□□□□□ -0.22
CCM2-212ENST00000480382 ABHD15Q6UXT9 468 aa13.65□□□□□ -0.22
CCM2-212ENST00000480382 CCDC60Q8IWA6 550 aaPredicted RBP13.65□□□□□ -0.22
CCM2-212ENST00000480382 CTAGE1Q96RT6 745 aa13.65□□□□□ -0.22
CCM2-212ENST00000480382 RIT2Q99578 217 aa13.65□□□□□ -0.22
CCM2-212ENST00000480382 GDF15Q99988 308 aa13.65□□□□□ -0.22
CCM2-212ENST00000480382 LBHD1Q9BQE6 289 aaPredicted RBP13.65□□□□□ -0.22
CCM2-212ENST00000480382 UNC45AQ9H3U1 944 aa13.65□□□□□ -0.22
CCM2-212ENST00000480382 HIPK3Q9H422 1215 aa13.65□□□□□ -0.22
CCM2-212ENST00000480382 RNPEPQ9H4A4 650 aa13.65□□□□□ -0.22
CCM2-212ENST00000480382 SMARCAD1Q9H4L7 1026 aa13.65□□□□□ -0.22
CCM2-212ENST00000480382 AZI2Q9H6S1 392 aa13.65□□□□□ -0.22
CCM2-212ENST00000480382 ERAP1Q9NZ08 941 aa13.65□□□□□ -0.22
CCM2-212ENST00000480382 IGKV6D-21A0A0A0MT36 114 aa13.64□□□□□ -0.23
CCM2-212ENST00000480382 BACH1O14867 736 aa13.64□□□□□ -0.23
CCM2-212ENST00000480382 PSMD10O75832 226 aa13.64□□□□□ -0.23
CCM2-212ENST00000480382 ATP2B1P20020 1258 aa13.64□□□□□ -0.23
CCM2-212ENST00000480382 HOXC8P31273 242 aa13.64□□□□□ -0.23
CCM2-212ENST00000480382 MIS18BP1Q6P0N0 1132 aa13.64□□□□□ -0.23
CCM2-212ENST00000480382 NOSTRINQ8IVI9 506 aa13.64□□□□□ -0.23
CCM2-212ENST00000480382 HSCBQ8IWL3 235 aa13.64□□□□□ -0.23
CCM2-212ENST00000480382 SMAP1Q8IYB5 467 aaPredicted RBP13.64□□□□□ -0.23
CCM2-212ENST00000480382 DHX38Q92620 1227 aaKnown RBP13.64□□□□□ -0.23
CCM2-212ENST00000480382 SNX21Q969T3 373 aa13.64□□□□□ -0.23
CCM2-212ENST00000480382 NOC4LQ9BVI4 516 aaKnown RBP13.64□□□□□ -0.23
CCM2-212ENST00000480382 PRO3102Q9H379 93 aa13.64□□□□□ -0.23
CCM2-212ENST00000480382 KCNMB3Q9NPA1 279 aa13.64□□□□□ -0.23
CCM2-212ENST00000480382 FOXD4L1Q9NU39 408 aa13.64□□□□□ -0.23
CCM2-212ENST00000480382 COLQQ9Y215 455 aaPredicted RBP13.64□□□□□ -0.23
CCM2-212ENST00000480382 SAMM50Q9Y512 469 aa13.64□□□□□ -0.23
CCM2-212ENST00000480382 SIP14410 1827 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms