RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 HOXD8P13378 290 aaPredicted RBP14.08□□□□□ -0.16
USP11-208ENST00000480104 KCNA4P22459 653 aa14.08□□□□□ -0.16
USP11-208ENST00000480104 RFX1P22670 979 aa14.08□□□□□ -0.16
USP11-208ENST00000480104 HOXC8P31273 242 aa14.08□□□□□ -0.16
USP11-208ENST00000480104 UBE3AQ05086 875 aa14.08□□□□□ -0.16
USP11-208ENST00000480104 TBC1D8BQ0IIM8 1120 aa14.08□□□□□ -0.16
USP11-208ENST00000480104 TDGQ13569 410 aa14.08□□□□□ -0.16
USP11-208ENST00000480104 TPRNQ4KMQ1 711 aa14.08□□□□□ -0.16
USP11-208ENST00000480104 PLPP4Q5VZY2 271 aa14.08□□□□□ -0.16
USP11-208ENST00000480104 C1orf210Q8IVY1 113 aa14.08□□□□□ -0.16
USP11-208ENST00000480104 RASGRP4Q8TDF6 673 aa14.08□□□□□ -0.16
USP11-208ENST00000480104 EMID1Q96A84 441 aaPredicted RBP14.08□□□□□ -0.16
USP11-208ENST00000480104 DNAJC2Q99543 621 aaKnown RBP14.08□□□□□ -0.16
USP11-208ENST00000480104 RANBP17Q9H2T7 1088 aaKnown RBP14.08□□□□□ -0.16
USP11-208ENST00000480104 CHGBP05060 677 aa14.07□□□□□ -0.16
USP11-208ENST00000480104 PROS1P07225 676 aa14.07□□□□□ -0.16
USP11-208ENST00000480104 DCNP07585 359 aaKnown RBP14.07□□□□□ -0.16
USP11-208ENST00000480104 TGM1P22735 817 aa14.07□□□□□ -0.16
USP11-208ENST00000480104 ADD2P35612 726 aa14.07□□□□□ -0.16
USP11-208ENST00000480104 PLCD3Q8N3E9 789 aa14.07□□□□□ -0.16
USP11-208ENST00000480104 LINC01599Q8WXQ3 324 aa14.07□□□□□ -0.16
USP11-208ENST00000480104 PARD6AQ9NPB6 346 aa14.07□□□□□ -0.16
USP11-208ENST00000480104 DMXL2Q8TDJ6 3036 aa14.07□□□□□ -0.16
USP11-208ENST00000480104 KRBA1A5PL33 1030 aa14.06□□□□□ -0.16
USP11-208ENST00000480104 B4DLN1 442 aa14.06□□□□□ -0.16
USP11-208ENST00000480104 SPTLC1O15269 473 aa14.06□□□□□ -0.16
USP11-208ENST00000480104 SMIM10L2AP0DMW4 78 aa14.06□□□□□ -0.16
USP11-208ENST00000480104 SMIM10L2BP0DMW5 78 aa14.06□□□□□ -0.16
USP11-208ENST00000480104 PMLP29590 882 aa14.06□□□□□ -0.16
USP11-208ENST00000480104 MTHFRP42898 656 aa14.06□□□□□ -0.16
USP11-208ENST00000480104 GATMP50440 423 aa14.06□□□□□ -0.16
USP11-208ENST00000480104 MRPL12P52815 198 aaKnown RBP14.06□□□□□ -0.16
USP11-208ENST00000480104 ITIH3Q06033 890 aa14.06□□□□□ -0.16
USP11-208ENST00000480104 APOBRQ0VD83 1088 aa14.06□□□□□ -0.16
USP11-208ENST00000480104 FAM26DQ5JW98 314 aa14.06□□□□□ -0.16
USP11-208ENST00000480104 RCSD1Q6JBY9 416 aa14.06□□□□□ -0.16
USP11-208ENST00000480104 AACSQ86V21 672 aa14.06□□□□□ -0.16
USP11-208ENST00000480104 SECISBP2LQ93073 1101 aaKnown RBP14.06□□□□□ -0.16
USP11-208ENST00000480104 TBC1D17Q9HA65 648 aa14.06□□□□□ -0.16
USP11-208ENST00000480104 CYP26B1Q9NR63 512 aa14.06□□□□□ -0.16
USP11-208ENST00000480104 DLGAP2Q9P1A6 1054 aa14.06□□□□□ -0.16
USP11-208ENST00000480104 SMG5Q9UPR3 1016 aaKnown RBP14.06□□□□□ -0.16
USP11-208ENST00000480104 PLIN4Q96Q06 1357 aa14.06□□□□□ -0.16
USP11-208ENST00000480104 POTEMA6NI47 508 aa14.05□□□□□ -0.16
USP11-208ENST00000480104 HIDE1A8MVS5 230 aa14.05□□□□□ -0.16
USP11-208ENST00000480104 MINDY4BA8MYZ0 360 aa14.05□□□□□ -0.16
USP11-208ENST00000480104 SLC30A4O14863 429 aa14.05□□□□□ -0.16
USP11-208ENST00000480104 NARSO43776 548 aaKnown RBP14.05□□□□□ -0.16
USP11-208ENST00000480104 SORBS3O60504 671 aa14.05□□□□□ -0.16
USP11-208ENST00000480104 BCAR3O75815 825 aa14.05□□□□□ -0.16
USP11-208ENST00000480104 FGF18O76093 207 aa14.05□□□□□ -0.16
USP11-208ENST00000480104 CHRNA1P02708 482 aa14.05□□□□□ -0.16
USP11-208ENST00000480104 SHC2P98077 582 aa14.05□□□□□ -0.16
USP11-208ENST00000480104 LAMC2Q13753 1193 aa14.05□□□□□ -0.16
USP11-208ENST00000480104 LPIN1Q14693 890 aa14.05□□□□□ -0.16
USP11-208ENST00000480104 SBK1Q52WX2 424 aa14.05□□□□□ -0.16
USP11-208ENST00000480104 PDE12Q6L8Q7 609 aaKnown RBP14.05□□□□□ -0.16
USP11-208ENST00000480104 POTEGQ6S5H5 508 aa14.05□□□□□ -0.16
USP11-208ENST00000480104 MAML2Q8IZL2 1156 aaPredicted RBP14.05□□□□□ -0.16
USP11-208ENST00000480104 SSH3Q8TE77 659 aa14.05□□□□□ -0.16
USP11-208ENST00000480104 CASP10Q92851 521 aa14.05□□□□□ -0.16
USP11-208ENST00000480104 DDX41Q9UJV9 622 aaKnown RBP14.05□□□□□ -0.16
USP11-208ENST00000480104 DBR1Q9UK59 544 aaKnown RBP14.05□□□□□ -0.16
USP11-208ENST00000480104 ZMIZ1Q9ULJ6 1067 aa14.05□□□□□ -0.16
USP11-208ENST00000480104 USTQ9Y2C2 406 aa14.05□□□□□ -0.16
USP11-208ENST00000480104 EOMESO95936 686 aa14.04□□□□□ -0.16
USP11-208ENST00000480104 CFHP08603 1231 aa14.04□□□□□ -0.16
USP11-208ENST00000480104 SLC16A2P36021 539 aa14.04□□□□□ -0.16
USP11-208ENST00000480104 NPAS4Q8IUM7 802 aa14.04□□□□□ -0.16
USP11-208ENST00000480104 ZNF444Q8N0Y2 327 aaPredicted RBP14.04□□□□□ -0.16
USP11-208ENST00000480104 C16orf70Q9BSU1 422 aa14.04□□□□□ -0.16
USP11-208ENST00000480104 EHMT1Q9H9B1 1298 aa14.04□□□□□ -0.16
USP11-208ENST00000480104 TMEM260Q9NX78 707 aa14.04□□□□□ -0.16
USP11-208ENST00000480104 MTMR7Q9Y216 660 aa14.04□□□□□ -0.16
USP11-208ENST00000480104 PCDHB12Q9Y5F1 795 aa14.04□□□□□ -0.16
USP11-208ENST00000480104 PPFIA4O75335 1185 aa14.03□□□□□ -0.16
USP11-208ENST00000480104 CCDC96Q2M329 555 aa14.03□□□□□ -0.16
USP11-208ENST00000480104 HSDL1Q3SXM5 330 aa14.03□□□□□ -0.16
USP11-208ENST00000480104 RARS2Q5T160 578 aaKnown RBP14.03□□□□□ -0.16
USP11-208ENST00000480104 TTBK2Q6IQ55 1244 aa14.03□□□□□ -0.16
USP11-208ENST00000480104 KIAA1841Q6NSI8 718 aa14.03□□□□□ -0.16
USP11-208ENST00000480104 NETO1Q8TDF5 533 aa14.03□□□□□ -0.16
USP11-208ENST00000480104 RNPEPQ9H4A4 650 aa14.03□□□□□ -0.16
USP11-208ENST00000480104 ENTPD7Q9NQZ7 604 aa14.03□□□□□ -0.16
USP11-208ENST00000480104 CA14Q9ULX7 337 aa14.03□□□□□ -0.16
USP11-208ENST00000480104 NOP58Q9Y2X3 529 aaKnown RBP14.03□□□□□ -0.16
USP11-208ENST00000480104 HCFC2Q9Y5Z7 792 aa14.03□□□□□ -0.16
USP11-208ENST00000480104 TSPY3P0CV98 308 aa14.02□□□□□ -0.17
USP11-208ENST00000480104 TSPY8P0CW00 308 aa14.02□□□□□ -0.17
USP11-208ENST00000480104 SPOUT1Q5T280 376 aaKnown RBP14.02□□□□□ -0.17
USP11-208ENST00000480104 SYDE2Q5VT97 1194 aa14.02□□□□□ -0.17
USP11-208ENST00000480104 KANK3Q6NY19 840 aa14.02□□□□□ -0.17
USP11-208ENST00000480104 XRRA1Q6P2D8 792 aa14.02□□□□□ -0.17
USP11-208ENST00000480104 THNSL1Q8IYQ7 743 aa14.02□□□□□ -0.17
USP11-208ENST00000480104 C12orf76Q8N812 135 aaPredicted RBP14.02□□□□□ -0.17
USP11-208ENST00000480104 NEDD1Q8NHV4 660 aa14.02□□□□□ -0.17
USP11-208ENST00000480104 SPATA33Q96N06 139 aa14.02□□□□□ -0.17
USP11-208ENST00000480104 TCF25Q9BQ70 676 aa14.02□□□□□ -0.17
USP11-208ENST00000480104 KCNK12Q9HB15 430 aa14.02□□□□□ -0.17
USP11-208ENST00000480104 AAASQ9NRG9 546 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms