RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 MPSTP25325 297 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 RCAN1P53805 252 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 GRB14Q14449 540 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 TKFCQ3LXA3 575 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 GPATCH4Q5T3I0 446 aaKnown RBP5.76□□□□□ -1.49
PTCD3-213ENST00000480102 OLFML2BQ68BL8 750 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 ELMSAN1Q6PJG2 1045 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 MFSD6Q6ZSS7 791 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 HFE2Q6ZVN8 426 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 ZNF589Q86UQ0 364 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-213ENST00000480102 FAM160B2Q86V87 743 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 IQCA1Q86XH1 822 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 RIOX2Q8IUF8 465 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 FBXL16Q8N461 479 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 SAMD3Q8N6K7 520 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 SLC44A5Q8NCS7 719 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 REPS2Q8NFH8 660 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 CD99L2Q8TCZ2 262 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 ACER1Q8TDN7 264 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 CHURC1Q8WUH1 139 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 CEP95Q96GE4 821 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 TEX13BQ9BXU2 312 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 SPATC1LQ9H0A9 340 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 RPAP3Q9H6T3 665 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-213ENST00000480102 SLC5A4Q9NY91 659 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 FBXO40Q9UH90 709 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 CPA4Q9UI42 421 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 FEM1BQ9UK73 627 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 MTMR7Q9Y216 660 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 MYH2Q9UKX2 1941 aa5.76□□□□□ -1.49
PTCD3-213ENST00000480102 WDR19Q8NEZ3 1342 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 OTOFQ9HC10 1997 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 TSPY2A6NKD2 308 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 MINDY4BA8MYZ0 360 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 VWA5AO00534 786 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 MPHOSPH10O00566 681 aaKnown RBP5.75□□□□□ -1.49
PTCD3-213ENST00000480102 TNPO2O14787 897 aaKnown RBP5.75□□□□□ -1.49
PTCD3-213ENST00000480102 CNMDO75829 334 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 NDUFB10O96000 172 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 HMGCRP04035 888 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 EIF2AK2P19525 551 aaKnown RBP5.75□□□□□ -1.49
PTCD3-213ENST00000480102 SMARCA1P28370 1054 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 CTGFP29279 349 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 GRK4P32298 578 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 RGS2P41220 211 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 UBXN2AP68543 259 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 TFAP4Q01664 338 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 GHRHRQ02643 423 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 TRAF1Q13077 416 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 MTMR3Q13615 1198 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 SLC9C1Q4G0N8 1177 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 VPS53Q5VIR6 699 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 CASC1Q6TDU7 716 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 CWC27Q6UX04 472 aaKnown RBP5.75□□□□□ -1.49
PTCD3-213ENST00000480102 MAMDC4Q6UXC1 1216 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 GPR142Q7Z601 462 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 PLEKHH3Q7Z736 793 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 UBE2Q1Q7Z7E8 422 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 TMTC2Q8N394 836 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 RGS22Q8NE09 1264 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 CHST13Q8NET6 341 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 OR13H1Q8NG92 308 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 DCAF4Q8WV16 495 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 TTC9Q92623 222 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 RILPL2Q969X0 211 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 NSUN5Q96P11 429 aaKnown RBP5.75□□□□□ -1.49
PTCD3-213ENST00000480102 APBA2Q99767 749 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 SLF1Q9BQI6 1058 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 SMG9Q9H0W8 520 aaKnown RBP5.75□□□□□ -1.49
PTCD3-213ENST00000480102 SLC38A10Q9HBR0 1119 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 PAK6Q9NQU5 681 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-213ENST00000480102 IL17RBQ9NRM6 502 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 MAP3K20Q9NYL2 800 aaKnown RBP5.75□□□□□ -1.49
PTCD3-213ENST00000480102 ZNF214Q9UL59 606 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-213ENST00000480102 FOCADQ5VW36 1801 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 MYH13Q9UKX3 1938 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 LOC285556D6RIA3 1793 aa5.75□□□□□ -1.49
PTCD3-213ENST00000480102 RPTORQ8N122 1335 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 DNAJC25-GNG10A0A024R161 153 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 CYP2D7A0A087X1C5 515 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 A0A0A0MRY4 1105 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 FLOT1O75955 427 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 GHRHP01286 108 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 NEFLP07196 543 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 HMGB1P09429 215 aaKnown RBP5.74□□□□□ -1.49
PTCD3-213ENST00000480102 BMP3P12645 472 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 NPR3P17342 541 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 EIF1AXP47813 144 aaKnown RBP5.74□□□□□ -1.49
PTCD3-213ENST00000480102 GJA8P48165 433 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 FLT3LGP49771 235 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 STAT2P52630 851 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 NKX3-2P78367 333 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 CAP1Q01518 475 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 PRKCZQ05513 592 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 TRDNQ13061 729 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 PPP2R5BQ15173 497 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 SHROOM1Q2M3G4 852 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-213ENST00000480102 PDE12Q6L8Q7 609 aaKnown RBP5.74□□□□□ -1.49
PTCD3-213ENST00000480102 CCDC84Q86UT8 332 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-213ENST00000480102 ANKRD13CQ8N6S4 541 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms