RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 TGFB2P61812 414 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 CCDC40Q4G0X9 1142 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 DALRD3Q5D0E6 543 aaKnown RBP14.4□□□□□ -0.1
SEC13-216ENST00000479868 SFR1Q86XK3 245 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 AGBL1Q96MI9 1066 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 TEPSINQ96N21 525 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 RUSC1Q9BVN2 902 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 TANGO6Q9C0B7 1094 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 EPC1Q9H2F5 836 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 POLD4Q9HCU8 107 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 MYO1AQ9UBC5 1043 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 PLAGL2Q9UPG8 496 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 STK24Q9Y6E0 443 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 BRCA1P38398 1863 aaKnown RBP14.4□□□□□ -0.1
SEC13-216ENST00000479868 RSPH10B2B2RC85 870 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 TFRCP02786 760 aaKnown RBP14.39□□□□□ -0.11
SEC13-216ENST00000479868 RSPH10BP0C881 870 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 PTGER2P43116 358 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 DGKZQ13574 1117 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 CTTNQ14247 550 aaKnown RBP14.39□□□□□ -0.11
SEC13-216ENST00000479868 LRCH2Q5VUJ6 765 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 TEX2Q8IWB9 1127 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 SMCR8Q8TEV9 937 aaPredicted RBP14.39□□□□□ -0.11
SEC13-216ENST00000479868 IQCDQ96DY2 449 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 CEP63Q96MT8 703 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 FEZ1Q99689 392 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 HSD17B14Q9BPX1 270 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 HAUS4Q9H6D7 363 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 RABGAP1Q9Y3P9 1069 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 RCCD1A6NED2 376 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 NFKBIEO00221 500 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 HNRNPH3P31942 346 aaKnown RBP14.39□□□□□ -0.11
SEC13-216ENST00000479868 CYLC1P35663 651 aaPredicted RBP14.39□□□□□ -0.11
SEC13-216ENST00000479868 CBX1P83916 185 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 CDK17Q00537 523 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 KCNMA1Q12791 1236 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 CEP55Q53EZ4 464 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 RSRC2Q7L4I2 434 aaKnown RBP14.39□□□□□ -0.11
SEC13-216ENST00000479868 CCDC170Q8IYT3 715 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 PIGOQ8TEQ8 1089 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 SLC5A5Q92911 643 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 NAPGQ99747 312 aaPredicted RBP14.39□□□□□ -0.11
SEC13-216ENST00000479868 ZMYND15Q9H091 742 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 ZNF446Q9NWS9 450 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 CDC23Q9UJX2 597 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 ZNF536O15090 1300 aa14.39□□□□□ -0.11
SEC13-216ENST00000479868 EIF3CLB5ME19 914 aaKnown RBP14.38□□□□□ -0.11
SEC13-216ENST00000479868 SLITRK3O94933 977 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 KIF20AO95235 890 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 EYA4O95677 639 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 HOXD13P35453 343 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 KRT83P78385 493 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 CYP27A1Q02318 531 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 GPIHBP1Q8IV16 184 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 ZC3H3Q8IXZ2 948 aaKnown RBP14.38□□□□□ -0.11
SEC13-216ENST00000479868 DYDC2Q96IM9 177 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 EIF3CQ99613 913 aaKnown RBP14.38□□□□□ -0.11
SEC13-216ENST00000479868 ZSWIM4Q9H7M6 989 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 ARHGAP20Q9P2F6 1191 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 LRRC53A6NM62 1247 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 ZNF263O14978 683 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 ZBTB39O15060 712 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 MYBP10242 640 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 ARP10275 920 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 POLD1P28340 1107 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 CLCN6P51797 869 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 MARSP56192 900 aaKnown RBP14.38□□□□□ -0.11
SEC13-216ENST00000479868 PPP2R5CQ13362 524 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 ADAM9Q13443 819 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 TEX35Q5T0J7 233 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 CCDC122Q5T0U0 273 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 EPM2AIP1Q7L775 607 aaPredicted RBP14.38□□□□□ -0.11
SEC13-216ENST00000479868 TRIM59Q8IWR1 403 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 TPH2Q8IWU9 490 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 BAP1Q92560 729 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 LACRTQ9GZZ8 138 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 DDX41Q9UJV9 622 aaKnown RBP14.38□□□□□ -0.11
SEC13-216ENST00000479868 CCPG1Q9ULG6 757 aa14.38□□□□□ -0.11
SEC13-216ENST00000479868 ASTN2O75129 1339 aaPredicted RBP14.38□□□□□ -0.11
SEC13-216ENST00000479868 ICAM1P05362 532 aa14.37□□□□□ -0.11
SEC13-216ENST00000479868 ZNF280AP59817 542 aaPredicted RBP14.37□□□□□ -0.11
SEC13-216ENST00000479868 EDRF1Q3B7T1 1238 aa14.37□□□□□ -0.11
SEC13-216ENST00000479868 RINT1Q6NUQ1 792 aa14.37□□□□□ -0.11
SEC13-216ENST00000479868 RRAGAQ7L523 313 aa14.37□□□□□ -0.11
SEC13-216ENST00000479868 KRT26Q7Z3Y9 468 aa14.37□□□□□ -0.11
SEC13-216ENST00000479868 KIAA1328Q86T90 577 aa14.37□□□□□ -0.11
SEC13-216ENST00000479868 PPP1R1BQ9UD71 204 aaPredicted RBP14.37□□□□□ -0.11
SEC13-216ENST00000479868 NFIBO00712 420 aa14.37□□□□□ -0.11
SEC13-216ENST00000479868 GAS7O60861 476 aa14.37□□□□□ -0.11
SEC13-216ENST00000479868 PRPF6O94906 941 aaKnown RBP14.37□□□□□ -0.11
SEC13-216ENST00000479868 GNA14O95837 355 aa14.37□□□□□ -0.11
SEC13-216ENST00000479868 NR2F2P24468 414 aa14.37□□□□□ -0.11
SEC13-216ENST00000479868 TNIP1Q15025 636 aa14.37□□□□□ -0.11
SEC13-216ENST00000479868 KNOP1Q1ED39 458 aaKnown RBP14.37□□□□□ -0.11
SEC13-216ENST00000479868 PPP4R3CPQ6ZMV5 832 aa14.37□□□□□ -0.11
SEC13-216ENST00000479868 ZNF662Q6ZS27 426 aa14.37□□□□□ -0.11
SEC13-216ENST00000479868 JAKMIP2Q96AA8 810 aa14.37□□□□□ -0.11
SEC13-216ENST00000479868 CCDC42Q96M95 316 aa14.37□□□□□ -0.11
SEC13-216ENST00000479868 ZNF577Q9BSK1 485 aa14.37□□□□□ -0.11
SEC13-216ENST00000479868 EHMT1Q9H9B1 1298 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms