RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 MINPP1Q9UNW1 487 aa22.7■■□□□ 1.22
COL13A1-208ENST00000479733 CACNA1SQ13698 1873 aa22.7■■□□□ 1.22
COL13A1-208ENST00000479733 TOGARAM1Q9Y4F4 1720 aa22.69■■□□□ 1.22
COL13A1-208ENST00000479733 PVALEFA0A1B0GWK0 134 aa22.69■■□□□ 1.22
COL13A1-208ENST00000479733 KRIT1O00522 736 aa22.69■■□□□ 1.22
COL13A1-208ENST00000479733 SLC37A4O43826 429 aa22.69■■□□□ 1.22
COL13A1-208ENST00000479733 KIF4AO95239 1232 aa22.69■■□□□ 1.22
COL13A1-208ENST00000479733 TDP2O95551 362 aa22.69■■□□□ 1.22
COL13A1-208ENST00000479733 NTSR2O95665 410 aa22.69■■□□□ 1.22
COL13A1-208ENST00000479733 FKBP3Q00688 224 aaKnown RBP22.69■■□□□ 1.22
COL13A1-208ENST00000479733 UBE4AQ14139 1066 aa22.69■■□□□ 1.22
COL13A1-208ENST00000479733 ASIC2Q16515 512 aa22.69■■□□□ 1.22
COL13A1-208ENST00000479733 LRIG3Q6UXM1 1119 aa22.69■■□□□ 1.22
COL13A1-208ENST00000479733 RUFY4Q6ZNE9 571 aa22.69■■□□□ 1.22
COL13A1-208ENST00000479733 ZNF444Q8N0Y2 327 aaPredicted RBP22.69■■□□□ 1.22
COL13A1-208ENST00000479733 TBC1D31Q96DN5 1066 aa22.69■■□□□ 1.22
COL13A1-208ENST00000479733 VEZTQ9HBM0 779 aa22.69■■□□□ 1.22
COL13A1-208ENST00000479733 COL4A1P02462 1669 aa22.69■■□□□ 1.22
COL13A1-208ENST00000479733 SGSM3Q96HU1 749 aa22.69■■□□□ 1.22
COL13A1-208ENST00000479733 UBA5Q9GZZ9 404 aa22.69■■□□□ 1.22
COL13A1-208ENST00000479733 SAP30BPQ9UHR5 308 aaKnown RBP22.69■■□□□ 1.22
COL13A1-208ENST00000479733 MYBP10242 640 aa22.68■■□□□ 1.22
COL13A1-208ENST00000479733 DHX9Q08211 1270 aaKnown RBP22.68■■□□□ 1.22
COL13A1-208ENST00000479733 BYSLQ13895 437 aaKnown RBP22.68■■□□□ 1.22
COL13A1-208ENST00000479733 COBLL1Q53SF7 1204 aa22.68■■□□□ 1.22
COL13A1-208ENST00000479733 GGA2Q9UJY4 613 aa22.68■■□□□ 1.22
COL13A1-208ENST00000479733 TMEM59LQ9UK28 342 aa22.68■■□□□ 1.22
COL13A1-208ENST00000479733 PTK2Q05397 1052 aa22.68■■□□□ 1.22
COL13A1-208ENST00000479733 IFFO1Q0D2I5 559 aa22.68■■□□□ 1.22
COL13A1-208ENST00000479733 GKAP1Q5VSY0 366 aaPredicted RBP22.68■■□□□ 1.22
COL13A1-208ENST00000479733 C1orf131Q8NDD1 294 aaKnown RBP22.68■■□□□ 1.22
COL13A1-208ENST00000479733 EDEM3Q9BZQ6 932 aa22.68■■□□□ 1.22
COL13A1-208ENST00000479733 TTI1O43156 1089 aa22.68■■□□□ 1.22
COL13A1-208ENST00000479733 CHRM1P11229 460 aaPredicted RBP22.68■■□□□ 1.22
COL13A1-208ENST00000479733 DRP2Q13474 957 aa22.68■■□□□ 1.22
COL13A1-208ENST00000479733 CUL1Q13616 776 aa22.68■■□□□ 1.22
COL13A1-208ENST00000479733 METTL13Q8N6R0 699 aa22.68■■□□□ 1.22
COL13A1-208ENST00000479733 RAD54LQ92698 747 aa22.68■■□□□ 1.22
COL13A1-208ENST00000479733 CELF1Q92879 486 aaKnown RBP22.68■■□□□ 1.22
COL13A1-208ENST00000479733 HVCN1Q96D96 273 aa22.68■■□□□ 1.22
COL13A1-208ENST00000479733 ZHX3Q9H4I2 956 aa22.68■■□□□ 1.22
COL13A1-208ENST00000479733 NOC2LQ9Y3T9 749 aaKnown RBP22.68■■□□□ 1.22
COL13A1-208ENST00000479733 PPP1R12BO60237 982 aaPredicted RBP22.67■■□□□ 1.22
COL13A1-208ENST00000479733 BICDL1Q6ZP65 573 aa22.67■■□□□ 1.22
COL13A1-208ENST00000479733 ADAT2Q7Z6V5 191 aaKnown RBP22.67■■□□□ 1.22
COL13A1-208ENST00000479733 DZIP1Q86YF9 867 aaKnown RBP22.67■■□□□ 1.22
COL13A1-208ENST00000479733 PIGSQ96S52 555 aa22.67■■□□□ 1.22
COL13A1-208ENST00000479733 SMIM23A6NLE4 172 aa22.67■■□□□ 1.22
COL13A1-208ENST00000479733 GNA11P29992 359 aa22.67■■□□□ 1.22
COL13A1-208ENST00000479733 ECM1Q16610 540 aa22.67■■□□□ 1.22
COL13A1-208ENST00000479733 SCFD2Q8WU76 684 aa22.67■■□□□ 1.22
COL13A1-208ENST00000479733 NUCKS1Q9H1E3 243 aaKnown RBP22.67■■□□□ 1.22
COL13A1-208ENST00000479733 ATP8A1Q9Y2Q0 1164 aa22.67■■□□□ 1.22
COL13A1-208ENST00000479733 PALM3A6NDB9 673 aaPredicted RBP22.66■■□□□ 1.22
COL13A1-208ENST00000479733 COASYQ13057 564 aa22.66■■□□□ 1.22
COL13A1-208ENST00000479733 BIRC3Q13489 604 aa22.66■■□□□ 1.22
COL13A1-208ENST00000479733 ERFEQ4G0M1 354 aa22.66■■□□□ 1.22
COL13A1-208ENST00000479733 SBK1Q52WX2 424 aa22.66■■□□□ 1.22
COL13A1-208ENST00000479733 C12orf60Q5U649 245 aa22.66■■□□□ 1.22
COL13A1-208ENST00000479733 REXO1Q8N1G1 1221 aaKnown RBP22.66■■□□□ 1.22
COL13A1-208ENST00000479733 BAIAP2L1Q9UHR4 511 aa22.66■■□□□ 1.22
COL13A1-208ENST00000479733 ABCB11O95342 1321 aa22.66■■□□□ 1.22
COL13A1-208ENST00000479733 KRT79Q5XKE5 535 aa22.66■■□□□ 1.22
COL13A1-208ENST00000479733 STK17AQ9UEE5 414 aa22.66■■□□□ 1.22
COL13A1-208ENST00000479733 NPHP3-ACAD11A0A0J9YXS1 232 aa22.65■■□□□ 1.22
COL13A1-208ENST00000479733 PGRMC1O00264 195 aaKnown RBP22.65■■□□□ 1.22
COL13A1-208ENST00000479733 CAMTA2O94983 1202 aa22.65■■□□□ 1.22
COL13A1-208ENST00000479733 EZRP15311 586 aaKnown RBP22.65■■□□□ 1.22
COL13A1-208ENST00000479733 CRKLP46109 303 aaKnown RBP22.65■■□□□ 1.22
COL13A1-208ENST00000479733 USP11P51784 963 aa22.65■■□□□ 1.22
COL13A1-208ENST00000479733 TMEM266Q2M3C6 531 aa22.65■■□□□ 1.22
COL13A1-208ENST00000479733 WLSQ5T9L3 541 aa22.65■■□□□ 1.22
COL13A1-208ENST00000479733 INTS5Q6P9B9 1019 aaKnown RBP22.65■■□□□ 1.22
COL13A1-208ENST00000479733 BRINP3Q76B58 766 aa22.65■■□□□ 1.22
COL13A1-208ENST00000479733 ZNF571Q7Z3V5 609 aaPredicted RBP22.65■■□□□ 1.22
COL13A1-208ENST00000479733 SPAG5Q96R06 1193 aa22.65■■□□□ 1.22
COL13A1-208ENST00000479733 RIC8AQ9NPQ8 531 aa22.65■■□□□ 1.22
COL13A1-208ENST00000479733 SEC63Q9UGP8 760 aaKnown RBP22.65■■□□□ 1.22
COL13A1-208ENST00000479733 TLDC2A0PJX2 215 aa22.65■■□□□ 1.22
COL13A1-208ENST00000479733 PPP1R7Q15435 360 aa22.65■■□□□ 1.22
COL13A1-208ENST00000479733 PARP10Q53GL7 1025 aa22.65■■□□□ 1.22
COL13A1-208ENST00000479733 HIBCHQ6NVY1 386 aaPredicted RBP22.65■■□□□ 1.22
COL13A1-208ENST00000479733 TATDN2Q93075 761 aa22.65■■□□□ 1.22
COL13A1-208ENST00000479733 GOPCQ9HD26 462 aa22.65■■□□□ 1.22
COL13A1-208ENST00000479733 PANK4Q9NVE7 773 aa22.65■■□□□ 1.22
COL13A1-208ENST00000479733 PNMA2Q9UL42 364 aa22.65■■□□□ 1.22
COL13A1-208ENST00000479733 FAM26FQ5R3K3 315 aa22.64■■□□□ 1.22
COL13A1-208ENST00000479733 MSL1Q68DK7 614 aa22.64■■□□□ 1.22
COL13A1-208ENST00000479733 SH3RF3Q8TEJ3 882 aaPredicted RBP22.64■■□□□ 1.22
COL13A1-208ENST00000479733 SYN2Q92777 582 aaPredicted RBP22.64■■□□□ 1.22
COL13A1-208ENST00000479733 COA7Q96BR5 231 aa22.64■■□□□ 1.22
COL13A1-208ENST00000479733 CTNND1O60716 968 aaKnown RBP22.64■■□□□ 1.21
COL13A1-208ENST00000479733 SLC9A1P19634 815 aa22.64■■□□□ 1.21
COL13A1-208ENST00000479733 COPB2P35606 906 aa22.64■■□□□ 1.21
COL13A1-208ENST00000479733 PEX26Q7Z412 305 aa22.64■■□□□ 1.21
COL13A1-208ENST00000479733 TRIM51Q9BSJ1 452 aa22.64■■□□□ 1.21
COL13A1-208ENST00000479733 C21orf2O43822 256 aa22.64■■□□□ 1.21
COL13A1-208ENST00000479733 MARCH6O60337 910 aa22.64■■□□□ 1.21
COL13A1-208ENST00000479733 HIBADHP31937 336 aaKnown RBP22.64■■□□□ 1.21
COL13A1-208ENST00000479733 RPAINQ86UA6 219 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms