RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 LMAN2LQ9H0V9 348 aa15.34■□□□□ 0.05
ABCF1-206ENST00000479542 BCAS3Q9H6U6 928 aa15.34■□□□□ 0.05
ABCF1-206ENST00000479542 CD320Q9NPF0 282 aa15.34■□□□□ 0.05
ABCF1-206ENST00000479542 C11orf16Q9NQ32 467 aa15.34■□□□□ 0.05
ABCF1-206ENST00000479542 PRKAG3Q9UGI9 489 aa15.34■□□□□ 0.05
ABCF1-206ENST00000479542 MTUS1Q9ULD2 1270 aa15.34■□□□□ 0.05
ABCF1-206ENST00000479542 PRR33A8MZF0 331 aa15.33■□□□□ 0.04
ABCF1-206ENST00000479542 MEIS2O14770 477 aa15.33■□□□□ 0.04
ABCF1-206ENST00000479542 ALADP13716 330 aa15.33■□□□□ 0.04
ABCF1-206ENST00000479542 GSPT1P15170 499 aaKnown RBP15.33■□□□□ 0.04
ABCF1-206ENST00000479542 FAM117BQ6P1L5 589 aa15.33■□□□□ 0.04
ABCF1-206ENST00000479542 BANK1Q8NDB2 785 aa15.33■□□□□ 0.04
ABCF1-206ENST00000479542 CLP1Q92989 425 aaKnown RBP15.33■□□□□ 0.04
ABCF1-206ENST00000479542 RRP36Q96EU6 259 aaKnown RBP15.33■□□□□ 0.04
ABCF1-206ENST00000479542 IFIH1Q9BYX4 1025 aaKnown RBP15.33■□□□□ 0.04
ABCF1-206ENST00000479542 SETD4Q9NVD3 440 aa15.33■□□□□ 0.04
ABCF1-206ENST00000479542 MBLAC1A4D2B0 266 aaPredicted RBP15.32■□□□□ 0.04
ABCF1-206ENST00000479542 SGSM2O43147 1006 aa15.32■□□□□ 0.04
ABCF1-206ENST00000479542 KCNA5P22460 613 aa15.32■□□□□ 0.04
ABCF1-206ENST00000479542 PTH1RQ03431 593 aa15.32■□□□□ 0.04
ABCF1-206ENST00000479542 GPM6BQ13491 265 aa15.32■□□□□ 0.04
ABCF1-206ENST00000479542 PTCRAQ6ISU1 281 aaPredicted RBP15.32■□□□□ 0.04
ABCF1-206ENST00000479542 MB21D2Q8IYB1 491 aaPredicted RBP15.32■□□□□ 0.04
ABCF1-206ENST00000479542 SMARCC2Q8TAQ2 1214 aa15.32■□□□□ 0.04
ABCF1-206ENST00000479542 LMBR1Q8WVP7 490 aa15.32■□□□□ 0.04
ABCF1-206ENST00000479542 KHSRPQ92945 711 aaKnown RBP eCLIP15.32■□□□□ 0.04
ABCF1-206ENST00000479542 TNPO1Q92973 898 aaKnown RBP15.32■□□□□ 0.04
ABCF1-206ENST00000479542 IL17RAQ96F46 866 aa15.32■□□□□ 0.04
ABCF1-206ENST00000479542 NSUN3Q9H649 340 aaKnown RBP15.32■□□□□ 0.04
ABCF1-206ENST00000479542 SENP2Q9HC62 589 aa15.32■□□□□ 0.04
ABCF1-206ENST00000479542 POTEB3A0JP26 581 aa15.31■□□□□ 0.04
ABCF1-206ENST00000479542 CHRNA1P02708 482 aa15.31■□□□□ 0.04
ABCF1-206ENST00000479542 BMPR1AP36894 532 aa15.31■□□□□ 0.04
ABCF1-206ENST00000479542 ANTXR2P58335 489 aa15.31■□□□□ 0.04
ABCF1-206ENST00000479542 MGAT3Q09327 533 aa15.31■□□□□ 0.04
ABCF1-206ENST00000479542 CTC1Q2NKJ3 1217 aa15.31■□□□□ 0.04
ABCF1-206ENST00000479542 POTEBQ6S5H4 581 aa15.31■□□□□ 0.04
ABCF1-206ENST00000479542 RSPH3Q86UC2 560 aa15.31■□□□□ 0.04
ABCF1-206ENST00000479542 CTCFLQ8NI51 663 aaPredicted RBP15.31■□□□□ 0.04
ABCF1-206ENST00000479542 SEPT1Q8WYJ6 367 aa15.31■□□□□ 0.04
ABCF1-206ENST00000479542 ZNF689Q96CS4 500 aaPredicted RBP15.31■□□□□ 0.04
ABCF1-206ENST00000479542 OSBPL7Q9BZF2 842 aa15.31■□□□□ 0.04
ABCF1-206ENST00000479542 KCNH6Q9H252 994 aa15.31■□□□□ 0.04
ABCF1-206ENST00000479542 RC3H2Q9HBD1 1191 aaKnown RBP15.31■□□□□ 0.04
ABCF1-206ENST00000479542 ERAP1Q9NZ08 941 aa15.31■□□□□ 0.04
ABCF1-206ENST00000479542 RTEL1Q9NZ71 1219 aa15.31■□□□□ 0.04
ABCF1-206ENST00000479542 RALGAPA2Q2PPJ7 1873 aa15.31■□□□□ 0.04
ABCF1-206ENST00000479542 RRN3P2A6NIE6 340 aa15.3■□□□□ 0.04
ABCF1-206ENST00000479542 C19orf67A6NJJ6 358 aa15.3■□□□□ 0.04
ABCF1-206ENST00000479542 LINC00271P0C7V0 271 aa15.3■□□□□ 0.04
ABCF1-206ENST00000479542 KCNA2P16389 499 aa15.3■□□□□ 0.04
ABCF1-206ENST00000479542 PDE4AP27815 886 aa15.3■□□□□ 0.04
ABCF1-206ENST00000479542 LIFRP42702 1097 aa15.3■□□□□ 0.04
ABCF1-206ENST00000479542 ARHGAP4P98171 946 aa15.3■□□□□ 0.04
ABCF1-206ENST00000479542 NAALADL2Q58DX5 795 aa15.3■□□□□ 0.04
ABCF1-206ENST00000479542 USP17L6PQ6QN14 398 aa15.3■□□□□ 0.04
ABCF1-206ENST00000479542 ZNF654Q8IZM8 581 aa15.3■□□□□ 0.04
ABCF1-206ENST00000479542 FIBCD1Q8N539 461 aa15.3■□□□□ 0.04
ABCF1-206ENST00000479542 KAT6AQ92794 2004 aa15.3■□□□□ 0.04
ABCF1-206ENST00000479542 ZFP91Q96JP5 570 aaPredicted RBP15.3■□□□□ 0.04
ABCF1-206ENST00000479542 TMEM87BQ96K49 555 aa15.3■□□□□ 0.04
ABCF1-206ENST00000479542 C11orf84Q9BUA3 381 aaPredicted RBP15.3■□□□□ 0.04
ABCF1-206ENST00000479542 PLVAPQ9BX97 442 aa15.3■□□□□ 0.04
ABCF1-206ENST00000479542 SMARCAD1Q9H4L7 1026 aa15.3■□□□□ 0.04
ABCF1-206ENST00000479542 LY9Q9HBG7 655 aa15.3■□□□□ 0.04
ABCF1-206ENST00000479542 SEC63Q9UGP8 760 aaKnown RBP15.3■□□□□ 0.04
ABCF1-206ENST00000479542 UBIAD1Q9Y5Z9 338 aa15.3■□□□□ 0.04
ABCF1-206ENST00000479542 ENPP3O14638 875 aa15.29■□□□□ 0.04
ABCF1-206ENST00000479542 SORBS3O60504 671 aa15.29■□□□□ 0.04
ABCF1-206ENST00000479542 CALM1P0DP23 149 aa15.29■□□□□ 0.04
ABCF1-206ENST00000479542 CALM2P0DP24 149 aa15.29■□□□□ 0.04
ABCF1-206ENST00000479542 CALM3P0DP25 149 aa15.29■□□□□ 0.04
ABCF1-206ENST00000479542 TCF7P36402 384 aaPredicted RBP15.29■□□□□ 0.04
ABCF1-206ENST00000479542 CRIPAKQ8N1N5 446 aa15.29■□□□□ 0.04
ABCF1-206ENST00000479542 FTHL17Q9BXU8 183 aa15.29■□□□□ 0.04
ABCF1-206ENST00000479542 PSTPIP2Q9H939 334 aa15.29■□□□□ 0.04
ABCF1-206ENST00000479542 TTC3P53804 2025 aa15.29■□□□□ 0.04
ABCF1-206ENST00000479542 GSTTP1A0A1W2PQM5 241 aa15.28■□□□□ 0.04
ABCF1-206ENST00000479542 UPP2O95045 317 aa15.28■□□□□ 0.04
ABCF1-206ENST00000479542 CTSHP09668 335 aa15.28■□□□□ 0.04
ABCF1-206ENST00000479542 IL9P15248 144 aa15.28■□□□□ 0.04
ABCF1-206ENST00000479542 TCEAL5Q5H9L2 206 aa15.28■□□□□ 0.04
ABCF1-206ENST00000479542 FBXO47Q5MNV8 452 aa15.28■□□□□ 0.04
ABCF1-206ENST00000479542 CASC1Q6TDU7 716 aa15.28■□□□□ 0.04
ABCF1-206ENST00000479542 TSHZ1Q6ZSZ6 1077 aa15.28■□□□□ 0.04
ABCF1-206ENST00000479542 TRIM50Q86XT4 487 aa15.28■□□□□ 0.04
ABCF1-206ENST00000479542 P2RX5Q93086 422 aa15.28■□□□□ 0.04
ABCF1-206ENST00000479542 UPF3BQ9BZI7 483 aaKnown RBP15.28■□□□□ 0.04
ABCF1-206ENST00000479542 JADE2Q9NQC1 790 aa15.28■□□□□ 0.04
ABCF1-206ENST00000479542 ADGRA3Q8IWK6 1321 aa15.27■□□□□ 0.04
ABCF1-206ENST00000479542 ATP9AO75110 1047 aa15.27■□□□□ 0.04
ABCF1-206ENST00000479542 DGKIO75912 1065 aa15.27■□□□□ 0.04
ABCF1-206ENST00000479542 ITGB5P18084 799 aa15.27■□□□□ 0.04
ABCF1-206ENST00000479542 MCM5P33992 734 aa15.27■□□□□ 0.04
ABCF1-206ENST00000479542 PPFIA1Q13136 1202 aa15.27■□□□□ 0.04
ABCF1-206ENST00000479542 LPIN1Q14693 890 aa15.27■□□□□ 0.04
ABCF1-206ENST00000479542 MARCH8Q5T0T0 291 aa15.27■□□□□ 0.04
ABCF1-206ENST00000479542 UTP14CQ5TAP6 766 aaKnown RBP15.27■□□□□ 0.04
ABCF1-206ENST00000479542 ADHFE1Q8IWW8 467 aa15.27■□□□□ 0.04
ABCF1-206ENST00000479542 SRBD1Q8N5C6 995 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms