RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 IREB2P48200 963 aaKnown RBP9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 ZNF174Q15697 407 aa9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 HHIPL2Q6UWX4 724 aa9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 CHST15Q7LFX5 561 aaPredicted RBP9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 PTRH1Q86Y79 214 aaKnown RBP9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 FAM20CQ8IXL6 584 aa9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 WFDC12Q8WWY7 111 aa9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 GATA6Q92908 595 aa9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 LENG1Q96BZ8 264 aaPredicted RBP9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 ORAI2Q96SN7 254 aa9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 ATG3Q9NT62 314 aa9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 TCFL5Q9UL49 500 aa9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 CEP164Q9UPV0 1460 aa9.28□□□□□ -0.92
GAPVD1-217ENST00000479511 NRDCO43847 1150 aa9.28□□□□□ -0.92
GAPVD1-217ENST00000479511 KDM1AO60341 852 aa9.28□□□□□ -0.92
GAPVD1-217ENST00000479511 CTNND1O60716 968 aaKnown RBP9.28□□□□□ -0.92
GAPVD1-217ENST00000479511 MYL3P08590 195 aa9.28□□□□□ -0.92
GAPVD1-217ENST00000479511 PTX3P26022 381 aaPredicted RBP9.28□□□□□ -0.92
GAPVD1-217ENST00000479511 RPL11P62913 178 aaKnown RBP9.28□□□□□ -0.92
GAPVD1-217ENST00000479511 GPR19Q15760 415 aa9.28□□□□□ -0.92
GAPVD1-217ENST00000479511 ESRP1Q6NXG1 681 aaKnown RBP9.28□□□□□ -0.92
GAPVD1-217ENST00000479511 ZPBP2Q6X784 338 aa9.28□□□□□ -0.92
GAPVD1-217ENST00000479511 ARHGAP36Q6ZRI8 547 aa9.28□□□□□ -0.92
GAPVD1-217ENST00000479511 TOGARAM2Q6ZUX3 1019 aa9.28□□□□□ -0.92
GAPVD1-217ENST00000479511 TSPYL5Q86VY4 417 aaPredicted RBP9.28□□□□□ -0.92
GAPVD1-217ENST00000479511 NOSTRINQ8IVI9 506 aa9.28□□□□□ -0.92
GAPVD1-217ENST00000479511 UTP4Q969X6 686 aaKnown RBP9.28□□□□□ -0.92
GAPVD1-217ENST00000479511 NAA15Q9BXJ9 866 aaKnown RBP9.28□□□□□ -0.92
GAPVD1-217ENST00000479511 GTF2IRD1Q9UHL9 959 aa9.28□□□□□ -0.92
GAPVD1-217ENST00000479511 IGF2BP3O00425 579 aaKnown RBP eCLIP9.27□□□□□ -0.93
GAPVD1-217ENST00000479511 WDHD1O75717 1129 aaPredicted RBP9.27□□□□□ -0.93
GAPVD1-217ENST00000479511 RHCEP18577 417 aa9.27□□□□□ -0.93
GAPVD1-217ENST00000479511 AKAP5P24588 427 aa9.27□□□□□ -0.93
GAPVD1-217ENST00000479511 TRAPPC10P48553 1259 aa9.27□□□□□ -0.93
GAPVD1-217ENST00000479511 KIF11P52732 1056 aa9.27□□□□□ -0.93
GAPVD1-217ENST00000479511 PCBP3P57721 371 aaKnown RBP9.27□□□□□ -0.93
GAPVD1-217ENST00000479511 RHDQ02161 417 aa9.27□□□□□ -0.93
GAPVD1-217ENST00000479511 IFI16Q16666 785 aaKnown RBP9.27□□□□□ -0.93
GAPVD1-217ENST00000479511 PRRT3Q5FWE3 981 aa9.27□□□□□ -0.93
GAPVD1-217ENST00000479511 ZNF385CQ66K41 422 aaPredicted RBP9.27□□□□□ -0.93
GAPVD1-217ENST00000479511 PAOXQ6QHF9 649 aa9.27□□□□□ -0.93
GAPVD1-217ENST00000479511 CATIPQ7Z7H3 387 aa9.27□□□□□ -0.93
GAPVD1-217ENST00000479511 VPS37AQ8NEZ2 397 aa9.27□□□□□ -0.93
GAPVD1-217ENST00000479511 GJA10Q969M2 543 aa9.27□□□□□ -0.93
GAPVD1-217ENST00000479511 CDADC1Q9BWV3 514 aa9.27□□□□□ -0.93
GAPVD1-217ENST00000479511 U3KQE9 123 aa9.27□□□□□ -0.93
GAPVD1-217ENST00000479511 WTIPA6NIX2 430 aaPredicted RBP9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 MAN2B1O00754 1011 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 NKRFO15226 690 aaKnown RBP eCLIP9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 OFD1O75665 1012 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 TCEA3O75764 348 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 C5AR1P21730 350 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 ADMP35318 185 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 FXR1P51114 621 aaKnown RBP eCLIP9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 SRSF2Q01130 221 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 ADCY1Q08828 1119 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 SEC23AQ15436 765 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 UVSSAQ2YD98 709 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 HABP4Q5JVS0 413 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 SKAP1Q86WV1 359 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 SHISA5Q8N114 240 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 ZBTB34Q8NCN2 500 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 TMEM52Q8NDY8 209 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 GIMAP7Q8NHV1 300 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 SH3RF2Q8TEC5 729 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 PNISRQ8TF01 805 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 PPM1EQ8WY54 764 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 GTPBP4Q9BZE4 634 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 PCIF1Q9H4Z3 704 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 SP110Q9HB58 689 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 KLHL11Q9NVR0 708 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 BTG4Q9NY30 223 aa9.26□□□□□ -0.93
GAPVD1-217ENST00000479511 GNAT1P11488 350 aa9.25□□□□□ -0.93
GAPVD1-217ENST00000479511 SLC5A1P13866 664 aa9.25□□□□□ -0.93
GAPVD1-217ENST00000479511 LORP23490 312 aaPredicted RBP9.25□□□□□ -0.93
GAPVD1-217ENST00000479511 TMEM95Q3KNT9 176 aa9.25□□□□□ -0.93
GAPVD1-217ENST00000479511 ZFYVE27Q5T4F4 411 aa9.25□□□□□ -0.93
GAPVD1-217ENST00000479511 CPZQ66K79 652 aa9.25□□□□□ -0.93
GAPVD1-217ENST00000479511 LILRA6Q6PI73 481 aa9.25□□□□□ -0.93
GAPVD1-217ENST00000479511 OGFOD3Q6PK18 319 aa9.25□□□□□ -0.93
GAPVD1-217ENST00000479511 FRMD7Q6ZUT3 714 aa9.25□□□□□ -0.93
GAPVD1-217ENST00000479511 FAM43AQ8N2R8 423 aa9.25□□□□□ -0.93
GAPVD1-217ENST00000479511 TMEM169Q96HH4 297 aa9.25□□□□□ -0.93
GAPVD1-217ENST00000479511 MEGF10Q96KG7 1140 aa9.25□□□□□ -0.93
GAPVD1-217ENST00000479511 ACO2Q99798 780 aaKnown RBP9.25□□□□□ -0.93
GAPVD1-217ENST00000479511 RNF38Q9H0F5 515 aa9.25□□□□□ -0.93
GAPVD1-217ENST00000479511 KCNF1Q9H3M0 494 aa9.25□□□□□ -0.93
GAPVD1-217ENST00000479511 DNAJC28Q9NX36 388 aa9.25□□□□□ -0.93
GAPVD1-217ENST00000479511 TMEM82A0PJX8 343 aa9.24□□□□□ -0.93
GAPVD1-217ENST00000479511 FAM155AB1AL88 458 aaPredicted RBP9.24□□□□□ -0.93
GAPVD1-217ENST00000479511 H7BY64 318 aa9.24□□□□□ -0.93
GAPVD1-217ENST00000479511 SCDO00767 359 aa9.24□□□□□ -0.93
GAPVD1-217ENST00000479511 AGXTP21549 392 aa9.24□□□□□ -0.93
GAPVD1-217ENST00000479511 FPR2P25090 351 aa9.24□□□□□ -0.93
GAPVD1-217ENST00000479511 CEBPAP49715 358 aaPredicted RBP9.24□□□□□ -0.93
GAPVD1-217ENST00000479511 RAPGEF1Q13905 1077 aa9.24□□□□□ -0.93
GAPVD1-217ENST00000479511 GAB4Q2WGN9 574 aa9.24□□□□□ -0.93
GAPVD1-217ENST00000479511 PLA2G4EQ3MJ16 856 aa9.24□□□□□ -0.93
GAPVD1-217ENST00000479511 ATAT1Q5SQI0 421 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms