RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ACTR2P61160 394 aa23.2■■□□□ 1.3
VARS-224ENST00000479051 KRT76Q01546 638 aa23.2■■□□□ 1.3
VARS-224ENST00000479051 PPP4R3AQ6IN85 833 aa23.2■■□□□ 1.3
VARS-224ENST00000479051 GLG1Q92896 1179 aa23.2■■□□□ 1.3
VARS-224ENST00000479051 TNFRSF25Q93038 417 aa23.2■■□□□ 1.3
VARS-224ENST00000479051 TRPV6Q9H1D0 765 aa23.2■■□□□ 1.3
VARS-224ENST00000479051 FOXP1Q9H334 677 aaPredicted RBP23.2■■□□□ 1.3
VARS-224ENST00000479051 SMARCAD1Q9H4L7 1026 aa23.2■■□□□ 1.3
VARS-224ENST00000479051 TRIM43BA6NCK2 446 aa23.19■■□□□ 1.3
VARS-224ENST00000479051 MSH4O15457 936 aa23.19■■□□□ 1.3
VARS-224ENST00000479051 EDIL3O43854 480 aa23.19■■□□□ 1.3
VARS-224ENST00000479051 CCNT1O60563 726 aaKnown RBP23.19■■□□□ 1.3
VARS-224ENST00000479051 GJB2P29033 226 aa23.19■■□□□ 1.3
VARS-224ENST00000479051 SH3RF1Q7Z6J0 888 aa23.19■■□□□ 1.3
VARS-224ENST00000479051 TRIM43Q96BQ3 446 aaPredicted RBP23.19■■□□□ 1.3
VARS-224ENST00000479051 MBOAT7Q96N66 472 aa23.19■■□□□ 1.3
VARS-224ENST00000479051 RIT2Q99578 217 aa23.19■■□□□ 1.3
VARS-224ENST00000479051 ERAP1Q9NZ08 941 aa23.19■■□□□ 1.3
VARS-224ENST00000479051 TBX21Q9UL17 535 aa23.19■■□□□ 1.3
VARS-224ENST00000479051 CEP290O15078 2479 aa23.18■■□□□ 1.3
VARS-224ENST00000479051 EMSYQ7Z589 1322 aa23.18■■□□□ 1.3
VARS-224ENST00000479051 GAS7O60861 476 aa23.18■■□□□ 1.3
VARS-224ENST00000479051 LRCH2Q5VUJ6 765 aa23.18■■□□□ 1.3
VARS-224ENST00000479051 ZNF746Q6NUN9 644 aaPredicted RBP23.18■■□□□ 1.3
VARS-224ENST00000479051 MIS18BP1Q6P0N0 1132 aa23.18■■□□□ 1.3
VARS-224ENST00000479051 TRIM50Q86XT4 487 aa23.18■■□□□ 1.3
VARS-224ENST00000479051 SMAP1Q8IYB5 467 aaPredicted RBP23.18■■□□□ 1.3
VARS-224ENST00000479051 TNPO1Q92973 898 aaKnown RBP23.18■■□□□ 1.3
VARS-224ENST00000479051 UIMC1Q96RL1 719 aa23.18■■□□□ 1.3
VARS-224ENST00000479051 TEKT3Q9BXF9 490 aa23.18■■□□□ 1.3
VARS-224ENST00000479051 TRMT13Q9NUP7 481 aaKnown RBP23.18■■□□□ 1.3
VARS-224ENST00000479051 HDAC6Q9UBN7 1215 aa23.18■■□□□ 1.3
VARS-224ENST00000479051 GTF2IRD1Q9UHL9 959 aa23.18■■□□□ 1.3
VARS-224ENST00000479051 DHX15O43143 795 aaKnown RBP23.17■■□□□ 1.3
VARS-224ENST00000479051 MARCH6O60337 910 aa23.17■■□□□ 1.3
VARS-224ENST00000479051 MAGEA10P43363 369 aaPredicted RBP23.17■■□□□ 1.3
VARS-224ENST00000479051 CUL4AQ13619 759 aa23.17■■□□□ 1.3
VARS-224ENST00000479051 PTGISQ16647 500 aa23.17■■□□□ 1.3
VARS-224ENST00000479051 EARS2Q5JPH6 523 aaKnown RBP23.17■■□□□ 1.3
VARS-224ENST00000479051 SLC5A5Q92911 643 aa23.17■■□□□ 1.3
VARS-224ENST00000479051 HIPK3Q9H422 1215 aa23.17■■□□□ 1.3
VARS-224ENST00000479051 TELO2Q9Y4R8 837 aa23.17■■□□□ 1.3
VARS-224ENST00000479051 FAM205CA6NFA0 338 aa23.16■■□□□ 1.3
VARS-224ENST00000479051 H3BQV1 296 aa23.16■■□□□ 1.3
VARS-224ENST00000479051 K7ELQ4 463 aaPredicted RBP23.16■■□□□ 1.3
VARS-224ENST00000479051 BACH1O14867 736 aa23.16■■□□□ 1.3
VARS-224ENST00000479051 LGR5O75473 907 aa23.16■■□□□ 1.3
VARS-224ENST00000479051 CCNE2O96020 404 aa23.16■■□□□ 1.3
VARS-224ENST00000479051 TIMP1P01033 207 aa23.16■■□□□ 1.3
VARS-224ENST00000479051 GNAT1P11488 350 aa23.16■■□□□ 1.3
VARS-224ENST00000479051 MDM2Q00987 491 aaPredicted RBP23.16■■□□□ 1.3
VARS-224ENST00000479051 FAM160B1Q5W0V3 765 aa23.16■■□□□ 1.3
VARS-224ENST00000479051 CHRDL2Q6WN34 429 aa23.16■■□□□ 1.3
VARS-224ENST00000479051 HSCBQ8IWL3 235 aa23.16■■□□□ 1.3
VARS-224ENST00000479051 CCDC155Q8N6L0 562 aa23.16■■□□□ 1.3
VARS-224ENST00000479051 PPP1R13LQ8WUF5 828 aa23.16■■□□□ 1.3
VARS-224ENST00000479051 SNX21Q969T3 373 aa23.16■■□□□ 1.3
VARS-224ENST00000479051 SAMM50Q9Y512 469 aa23.16■■□□□ 1.3
VARS-224ENST00000479051 C17orf102A2RUQ5 167 aa23.15■■□□□ 1.3
VARS-224ENST00000479051 WDR64B1ANS9 1081 aa23.15■■□□□ 1.3
VARS-224ENST00000479051 TBX3O15119 743 aa23.15■■□□□ 1.3
VARS-224ENST00000479051 ATG7O95352 703 aa23.15■■□□□ 1.3
VARS-224ENST00000479051 PSAPP07602 524 aa23.15■■□□□ 1.3
VARS-224ENST00000479051 SMIM10L2AP0DMW4 78 aa23.15■■□□□ 1.3
VARS-224ENST00000479051 SMIM10L2BP0DMW5 78 aa23.15■■□□□ 1.3
VARS-224ENST00000479051 SLC26A2P50443 739 aa23.15■■□□□ 1.3
VARS-224ENST00000479051 STAT5BP51692 787 aa23.15■■□□□ 1.3
VARS-224ENST00000479051 GDF6Q6KF10 455 aaPredicted RBP23.15■■□□□ 1.3
VARS-224ENST00000479051 BADQ92934 168 aa23.15■■□□□ 1.3
VARS-224ENST00000479051 FAM20AQ96MK3 541 aa23.15■■□□□ 1.3
VARS-224ENST00000479051 PCDHA10Q9Y5I2 948 aa23.15■■□□□ 1.3
VARS-224ENST00000479051 SLC37A4O43826 429 aa23.14■■□□□ 1.29
VARS-224ENST00000479051 BAG4O95429 457 aaKnown RBP23.14■■□□□ 1.29
VARS-224ENST00000479051 MARK3P27448 753 aa23.14■■□□□ 1.29
VARS-224ENST00000479051 SFNP31947 248 aa23.14■■□□□ 1.29
VARS-224ENST00000479051 JAK3P52333 1124 aa23.14■■□□□ 1.29
VARS-224ENST00000479051 BFSP2Q13515 415 aa23.14■■□□□ 1.29
VARS-224ENST00000479051 ABHD15Q6UXT9 468 aa23.14■■□□□ 1.29
VARS-224ENST00000479051 PLPPR4Q7Z2D5 763 aa23.14■■□□□ 1.29
VARS-224ENST00000479051 NOSTRINQ8IVI9 506 aa23.14■■□□□ 1.29
VARS-224ENST00000479051 ETNPPLQ8TBG4 499 aa23.14■■□□□ 1.29
VARS-224ENST00000479051 GDF15Q99988 308 aa23.14■■□□□ 1.29
VARS-224ENST00000479051 PPP1R12CQ9BZL4 782 aa23.14■■□□□ 1.29
VARS-224ENST00000479051 NOL7Q9UMY1 257 aaKnown RBP23.14■■□□□ 1.29
VARS-224ENST00000479051 PSMD10O75832 226 aa23.13■■□□□ 1.29
VARS-224ENST00000479051 CYP2C9P11712 490 aa23.13■■□□□ 1.29
VARS-224ENST00000479051 BMP8BP34820 402 aa23.13■■□□□ 1.29
VARS-224ENST00000479051 LARP1BQ659C4 914 aaKnown RBP23.13■■□□□ 1.29
VARS-224ENST00000479051 SLFN12Q8IYM2 578 aa23.13■■□□□ 1.29
VARS-224ENST00000479051 TMEM199Q8N511 208 aa23.13■■□□□ 1.29
VARS-224ENST00000479051 RDM1Q8NG50 284 aa23.13■■□□□ 1.29
VARS-224ENST00000479051 ATP6V0A1Q93050 837 aa23.13■■□□□ 1.29
VARS-224ENST00000479051 INTS4Q96HW7 963 aaKnown RBP23.13■■□□□ 1.29
VARS-224ENST00000479051 NOC4LQ9BVI4 516 aaKnown RBP23.13■■□□□ 1.29
VARS-224ENST00000479051 UBE2OQ9C0C9 1292 aaKnown RBP23.13■■□□□ 1.29
VARS-224ENST00000479051 ZNF302Q9NR11 478 aa23.13■■□□□ 1.29
VARS-224ENST00000479051 LTBP2Q14767 1821 aa23.12■■□□□ 1.29
VARS-224ENST00000479051 NRCAMQ92823 1304 aa23.12■■□□□ 1.29
VARS-224ENST00000479051 IGKV6D-21A0A0A0MT36 114 aa23.12■■□□□ 1.29
VARS-224ENST00000479051 CHMP2AO43633 222 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms