RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 PDE6BP35913 854 aa7.22□□□□□ -1.25
CCDC171-207ENST00000478913 LBX1P52954 281 aa7.22□□□□□ -1.25
CCDC171-207ENST00000478913 KIZQ2M2Z5 673 aa7.22□□□□□ -1.25
CCDC171-207ENST00000478913 HABP4Q5JVS0 413 aaKnown RBP7.22□□□□□ -1.25
CCDC171-207ENST00000478913 LBX2Q6XYB7 198 aa7.22□□□□□ -1.25
CCDC171-207ENST00000478913 CEP68Q76N32 757 aa7.22□□□□□ -1.25
CCDC171-207ENST00000478913 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.22□□□□□ -1.25
CCDC171-207ENST00000478913 TRMT2BQ96GJ1 504 aaKnown RBP7.22□□□□□ -1.25
CCDC171-207ENST00000478913 TMEM169Q96HH4 297 aa7.22□□□□□ -1.25
CCDC171-207ENST00000478913 MTA3Q9BTC8 594 aa7.22□□□□□ -1.25
CCDC171-207ENST00000478913 TNFRSF12AQ9NP84 129 aa7.22□□□□□ -1.25
CCDC171-207ENST00000478913 FBXL7Q9UJT9 491 aa7.22□□□□□ -1.25
CCDC171-207ENST00000478913 MLH3Q9UHC1 1453 aa7.22□□□□□ -1.25
CCDC171-207ENST00000478913 DHX57Q6P158 1386 aaKnown RBP7.21□□□□□ -1.25
CCDC171-207ENST00000478913 MAST1Q9Y2H9 1570 aa7.21□□□□□ -1.25
CCDC171-207ENST00000478913 C22orf46C9J442 243 aa7.21□□□□□ -1.26
CCDC171-207ENST00000478913 NAT1P18440 290 aa7.21□□□□□ -1.26
CCDC171-207ENST00000478913 CBX2Q14781 532 aaPredicted RBP7.21□□□□□ -1.26
CCDC171-207ENST00000478913 FNDC3BQ53EP0 1204 aaKnown RBP7.21□□□□□ -1.26
CCDC171-207ENST00000478913 TRIM61Q5EBN2 209 aa7.21□□□□□ -1.26
CCDC171-207ENST00000478913 NLRP10Q86W26 655 aa7.21□□□□□ -1.26
CCDC171-207ENST00000478913 ALG1Q9BT22 464 aa7.21□□□□□ -1.26
CCDC171-207ENST00000478913 CLDND1Q9NY35 253 aa7.21□□□□□ -1.26
CCDC171-207ENST00000478913 COA3Q9Y2R0 106 aaPredicted RBP7.21□□□□□ -1.26
CCDC171-207ENST00000478913 PDE4DIPQ5VU43 2346 aa7.21□□□□□ -1.26
CCDC171-207ENST00000478913 PARD3Q8TEW0 1356 aa7.2□□□□□ -1.26
CCDC171-207ENST00000478913 CACNA1AO00555 2505 aa7.2□□□□□ -1.26
CCDC171-207ENST00000478913 OR14I1A6ND48 311 aa7.2□□□□□ -1.26
CCDC171-207ENST00000478913 H7BY64 318 aa7.2□□□□□ -1.26
CCDC171-207ENST00000478913 MPOP05164 745 aa7.2□□□□□ -1.26
CCDC171-207ENST00000478913 SDHBP21912 280 aa7.2□□□□□ -1.26
CCDC171-207ENST00000478913 CTCFP49711 727 aaPredicted RBP7.2□□□□□ -1.26
CCDC171-207ENST00000478913 ERVFRD-1P60508 538 aa7.2□□□□□ -1.26
CCDC171-207ENST00000478913 GUCY1A3Q02108 690 aa7.2□□□□□ -1.26
CCDC171-207ENST00000478913 TKFCQ3LXA3 575 aa7.2□□□□□ -1.26
CCDC171-207ENST00000478913 BRAPQ7Z569 592 aa7.2□□□□□ -1.26
CCDC171-207ENST00000478913 IRF2BP1Q8IU81 584 aa7.2□□□□□ -1.26
CCDC171-207ENST00000478913 GSTCDQ8NEC7 633 aa7.2□□□□□ -1.26
CCDC171-207ENST00000478913 SLC7A14Q8TBB6 771 aa7.2□□□□□ -1.26
CCDC171-207ENST00000478913 PLEKHO2Q8TD55 490 aa7.2□□□□□ -1.26
CCDC171-207ENST00000478913 LIN37Q96GY3 246 aaPredicted RBP7.2□□□□□ -1.26
CCDC171-207ENST00000478913 FEZ1Q99689 392 aa7.2□□□□□ -1.26
CCDC171-207ENST00000478913 FBLN5Q9UBX5 448 aa7.2□□□□□ -1.26
CCDC171-207ENST00000478913 CD2APQ9Y5K6 639 aa7.2□□□□□ -1.26
CCDC171-207ENST00000478913 FMN1Q68DA7 1419 aa7.19□□□□□ -1.26
CCDC171-207ENST00000478913 NLRP1Q9C000 1473 aa7.19□□□□□ -1.26
CCDC171-207ENST00000478913 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.19□□□□□ -1.26
CCDC171-207ENST00000478913 ZNF503-AS2A6NEH8 195 aa7.19□□□□□ -1.26
CCDC171-207ENST00000478913 NUDT19A8MXV4 375 aa7.19□□□□□ -1.26
CCDC171-207ENST00000478913 SRGAP3O43295 1099 aa7.19□□□□□ -1.26
CCDC171-207ENST00000478913 CLSTN1O94985 981 aa7.19□□□□□ -1.26
CCDC171-207ENST00000478913 CRTAMO95727 393 aa7.19□□□□□ -1.26
CCDC171-207ENST00000478913 DBHP09172 617 aa7.19□□□□□ -1.26
CCDC171-207ENST00000478913 GRK2P25098 689 aa7.19□□□□□ -1.26
CCDC171-207ENST00000478913 HSD3B2P26439 372 aa7.19□□□□□ -1.26
CCDC171-207ENST00000478913 GRK3P35626 688 aa7.19□□□□□ -1.26
CCDC171-207ENST00000478913 PLEKHG4Q58EX7 1191 aa7.19□□□□□ -1.26
CCDC171-207ENST00000478913 MROH9Q5TGP6 573 aa7.19□□□□□ -1.26
CCDC171-207ENST00000478913 WWC2Q6AWC2 1192 aa7.19□□□□□ -1.26
CCDC171-207ENST00000478913 Q8N1Y9 231 aa7.19□□□□□ -1.26
CCDC171-207ENST00000478913 MAGEB10Q96LZ2 347 aaPredicted RBP7.19□□□□□ -1.26
CCDC171-207ENST00000478913 PPARGC1AQ9UBK2 798 aaKnown RBP7.19□□□□□ -1.26
CCDC171-207ENST00000478913 PCDHA9Q9Y5H5 950 aa7.19□□□□□ -1.26
CCDC171-207ENST00000478913 X6R8D5 127 aa7.19□□□□□ -1.26
CCDC171-207ENST00000478913 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.18□□□□□ -1.26
CCDC171-207ENST00000478913 SOD2P04179 222 aa7.18□□□□□ -1.26
CCDC171-207ENST00000478913 NTRK1P04629 796 aa7.18□□□□□ -1.26
CCDC171-207ENST00000478913 CYBBP04839 570 aa7.18□□□□□ -1.26
CCDC171-207ENST00000478913 GLI4P10075 376 aa7.18□□□□□ -1.26
CCDC171-207ENST00000478913 TMEM62Q0P6H9 643 aa7.18□□□□□ -1.26
CCDC171-207ENST00000478913 PAK1Q13153 545 aa7.18□□□□□ -1.26
CCDC171-207ENST00000478913 PABPC4Q13310 644 aaKnown RBP eCLIP7.18□□□□□ -1.26
CCDC171-207ENST00000478913 RAB3GAP1Q15042 981 aa7.18□□□□□ -1.26
CCDC171-207ENST00000478913 TAF7LQ5H9L4 462 aa7.18□□□□□ -1.26
CCDC171-207ENST00000478913 PAQR3Q6TCH7 311 aa7.18□□□□□ -1.26
CCDC171-207ENST00000478913 KIAA0907Q7Z7F0 614 aaPredicted RBP7.18□□□□□ -1.26
CCDC171-207ENST00000478913 NETO2Q8NC67 525 aa7.18□□□□□ -1.26
CCDC171-207ENST00000478913 GCC1Q96CN9 775 aa7.18□□□□□ -1.26
CCDC171-207ENST00000478913 CLUHP3Q96NS8 147 aa7.18□□□□□ -1.26
CCDC171-207ENST00000478913 FAM53CQ9NYF3 392 aa7.18□□□□□ -1.26
CCDC171-207ENST00000478913 DBR1Q9UK59 544 aaKnown RBP7.18□□□□□ -1.26
CCDC171-207ENST00000478913 PCDHA8Q9Y5H6 950 aa7.18□□□□□ -1.26
CCDC171-207ENST00000478913 ADCY9O60503 1353 aa7.18□□□□□ -1.26
CCDC171-207ENST00000478913 SPHKAPQ2M3C7 1700 aa7.18□□□□□ -1.26
CCDC171-207ENST00000478913 KDM5AP29375 1690 aaKnown RBP7.17□□□□□ -1.26
CCDC171-207ENST00000478913 FAM47E-STBD1D6RA91 191 aa7.17□□□□□ -1.26
CCDC171-207ENST00000478913 RFPL3O75679 317 aa7.17□□□□□ -1.26
CCDC171-207ENST00000478913 RASGRP1O95267 797 aa7.17□□□□□ -1.26
CCDC171-207ENST00000478913 NR1I3Q14994 352 aa7.17□□□□□ -1.26
CCDC171-207ENST00000478913 C21orf62-AS1Q17RA5 79 aa7.17□□□□□ -1.26
CCDC171-207ENST00000478913 DCP2Q8IU60 420 aaKnown RBP7.17□□□□□ -1.26
CCDC171-207ENST00000478913 RIOX2Q8IUF8 465 aa7.17□□□□□ -1.26
CCDC171-207ENST00000478913 C16orf71Q8IYS4 520 aaPredicted RBP7.17□□□□□ -1.26
CCDC171-207ENST00000478913 SNX27Q96L92 541 aa7.17□□□□□ -1.26
CCDC171-207ENST00000478913 SLKQ9H2G2 1235 aaPredicted RBP7.17□□□□□ -1.26
CCDC171-207ENST00000478913 EPB41L1Q9H4G0 881 aa7.17□□□□□ -1.26
CCDC171-207ENST00000478913 TRIM39Q9HCM9 518 aa7.17□□□□□ -1.26
CCDC171-207ENST00000478913 NUDT5Q9UKK9 219 aa7.17□□□□□ -1.26
CCDC171-207ENST00000478913 NCOA2Q15596 1464 aa7.17□□□□□ -1.26
CCDC171-207ENST00000478913 LRRC10BA6NIK2 292 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms