RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 SPEGQ15772 3267 aa14.44□□□□□ -0.1
HDAC8-217ENST00000478743 ASPMQ8IZT6 3477 aa14.44□□□□□ -0.1
HDAC8-217ENST00000478743 ADRB1P08588 477 aa14.44□□□□□ -0.1
HDAC8-217ENST00000478743 LPIN1Q14693 890 aa14.44□□□□□ -0.1
HDAC8-217ENST00000478743 FAM26DQ5JW98 314 aa14.44□□□□□ -0.1
HDAC8-217ENST00000478743 KANK3Q6NY19 840 aa14.44□□□□□ -0.1
HDAC8-217ENST00000478743 BTNL9Q6UXG8 535 aa14.44□□□□□ -0.1
HDAC8-217ENST00000478743 CMTR2Q8IYT2 770 aaKnown RBP14.44□□□□□ -0.1
HDAC8-217ENST00000478743 FRAT1Q92837 279 aaPredicted RBP14.44□□□□□ -0.1
HDAC8-217ENST00000478743 OSBP2Q969R2 916 aa14.44□□□□□ -0.1
HDAC8-217ENST00000478743 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.44□□□□□ -0.1
HDAC8-217ENST00000478743 BCAS3Q9H6U6 928 aa14.44□□□□□ -0.1
HDAC8-217ENST00000478743 GPCPD1Q9NPB8 672 aa14.44□□□□□ -0.1
HDAC8-217ENST00000478743 LIMD1Q9UGP4 676 aa14.44□□□□□ -0.1
HDAC8-217ENST00000478743 NR2E1Q9Y466 385 aa14.44□□□□□ -0.1
HDAC8-217ENST00000478743 FRYQ5TBA9 3013 aa14.44□□□□□ -0.1
HDAC8-217ENST00000478743 FSCN2O14926 492 aa14.43□□□□□ -0.1
HDAC8-217ENST00000478743 MGAT3Q09327 533 aa14.43□□□□□ -0.1
HDAC8-217ENST00000478743 USH1GQ495M9 461 aa14.43□□□□□ -0.1
HDAC8-217ENST00000478743 NAALADL2Q58DX5 795 aa14.43□□□□□ -0.1
HDAC8-217ENST00000478743 PLPP4Q5VZY2 271 aa14.43□□□□□ -0.1
HDAC8-217ENST00000478743 CEP85Q6P2H3 762 aa14.43□□□□□ -0.1
HDAC8-217ENST00000478743 TMEM184AQ6ZMB5 413 aa14.43□□□□□ -0.1
HDAC8-217ENST00000478743 RUFY4Q6ZNE9 571 aa14.43□□□□□ -0.1
HDAC8-217ENST00000478743 RTN4RL1Q86UN2 441 aaPredicted RBP14.43□□□□□ -0.1
HDAC8-217ENST00000478743 SUMF1Q8NBK3 374 aa14.43□□□□□ -0.1
HDAC8-217ENST00000478743 MICAL1Q8TDZ2 1067 aa14.43□□□□□ -0.1
HDAC8-217ENST00000478743 GPKOWQ92917 476 aaPredicted RBP eCLIP14.43□□□□□ -0.1
HDAC8-217ENST00000478743 MPHOSPH6Q99547 160 aaKnown RBP14.43□□□□□ -0.1
HDAC8-217ENST00000478743 SEMA4AQ9H3S1 761 aa14.43□□□□□ -0.1
HDAC8-217ENST00000478743 EHMT1Q9H9B1 1298 aa14.43□□□□□ -0.1
HDAC8-217ENST00000478743 SETD4Q9NVD3 440 aa14.43□□□□□ -0.1
HDAC8-217ENST00000478743 TELO2Q9Y4R8 837 aa14.43□□□□□ -0.1
HDAC8-217ENST00000478743 FASNP49327 2511 aaKnown RBP14.43□□□□□ -0.1
HDAC8-217ENST00000478743 COL4A3Q01955 1670 aa14.42□□□□□ -0.1
HDAC8-217ENST00000478743 HIDE1A8MVS5 230 aa14.42□□□□□ -0.1
HDAC8-217ENST00000478743 CAND2O75155 1236 aa14.42□□□□□ -0.1
HDAC8-217ENST00000478743 CT47B1P0C2W7 299 aaPredicted RBP14.42□□□□□ -0.1
HDAC8-217ENST00000478743 EIF2AK2P19525 551 aaKnown RBP14.42□□□□□ -0.1
HDAC8-217ENST00000478743 TDO2P48775 406 aa14.42□□□□□ -0.1
HDAC8-217ENST00000478743 SIX5Q8N196 739 aa14.42□□□□□ -0.1
HDAC8-217ENST00000478743 SYTL5Q8TDW5 730 aaPredicted RBP14.42□□□□□ -0.1
HDAC8-217ENST00000478743 CHAMP1Q96JM3 812 aa14.42□□□□□ -0.1
HDAC8-217ENST00000478743 MRVI1Q9Y6F6 885 aa14.42□□□□□ -0.1
HDAC8-217ENST00000478743 M0R2C6 588 aa14.41□□□□□ -0.1
HDAC8-217ENST00000478743 SP2Q02086 613 aa14.41□□□□□ -0.1
HDAC8-217ENST00000478743 LAMC2Q13753 1193 aa14.41□□□□□ -0.1
HDAC8-217ENST00000478743 COL9A3Q14050 684 aaPredicted RBP14.41□□□□□ -0.1
HDAC8-217ENST00000478743 KIAA0319Q5VV43 1072 aa14.41□□□□□ -0.1
HDAC8-217ENST00000478743 MYSM1Q5VVJ2 828 aa14.41□□□□□ -0.1
HDAC8-217ENST00000478743 GIMAP6Q6P9H5 292 aa14.41□□□□□ -0.1
HDAC8-217ENST00000478743 TRIM50Q86XT4 487 aa14.41□□□□□ -0.1
HDAC8-217ENST00000478743 ZFP91Q96JP5 570 aaPredicted RBP14.41□□□□□ -0.1
HDAC8-217ENST00000478743 SPATA33Q96N06 139 aa14.41□□□□□ -0.1
HDAC8-217ENST00000478743 CDCA3Q99618 268 aaPredicted RBP14.41□□□□□ -0.1
HDAC8-217ENST00000478743 CPVLQ9H3G5 476 aa14.41□□□□□ -0.1
HDAC8-217ENST00000478743 POTEMA6NI47 508 aa14.4□□□□□ -0.1
HDAC8-217ENST00000478743 GGPS1O95749 300 aa14.4□□□□□ -0.1
HDAC8-217ENST00000478743 LGALS2P05162 132 aa14.4□□□□□ -0.1
HDAC8-217ENST00000478743 SP9P0CG40 484 aa14.4□□□□□ -0.1
HDAC8-217ENST00000478743 ADAM17P78536 824 aa14.4□□□□□ -0.1
HDAC8-217ENST00000478743 STXBP2Q15833 593 aa14.4□□□□□ -0.1
HDAC8-217ENST00000478743 POTEGQ6S5H5 508 aa14.4□□□□□ -0.1
HDAC8-217ENST00000478743 ERC1Q8IUD2 1116 aa14.4□□□□□ -0.1
HDAC8-217ENST00000478743 TDRD5Q8NAT2 981 aaKnown RBP14.4□□□□□ -0.1
HDAC8-217ENST00000478743 DCAF4Q8WV16 495 aa14.4□□□□□ -0.1
HDAC8-217ENST00000478743 RTP3Q9BQQ7 232 aa14.4□□□□□ -0.1
HDAC8-217ENST00000478743 AGO3Q9H9G7 860 aaKnown RBP14.4□□□□□ -0.1
HDAC8-217ENST00000478743 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.4□□□□□ -0.1
HDAC8-217ENST00000478743 PATJQ8NI35 1801 aa14.39□□□□□ -0.11
HDAC8-217ENST00000478743 ZFYVE26Q68DK2 2539 aa14.39□□□□□ -0.11
HDAC8-217ENST00000478743 KRBA1A5PL33 1030 aa14.39□□□□□ -0.11
HDAC8-217ENST00000478743 H3BRB1 525 aa14.39□□□□□ -0.11
HDAC8-217ENST00000478743 GPAA1O43292 621 aa14.39□□□□□ -0.11
HDAC8-217ENST00000478743 NARSO43776 548 aaKnown RBP14.39□□□□□ -0.11
HDAC8-217ENST00000478743 FGF18O76093 207 aa14.39□□□□□ -0.11
HDAC8-217ENST00000478743 IFIT2P09913 472 aaKnown RBP14.39□□□□□ -0.11
HDAC8-217ENST00000478743 IBSPP21815 317 aaPredicted RBP14.39□□□□□ -0.11
HDAC8-217ENST00000478743 UBA1P22314 1058 aaKnown RBP14.39□□□□□ -0.11
HDAC8-217ENST00000478743 CELF3Q5SZQ8 465 aaKnown RBP14.39□□□□□ -0.11
HDAC8-217ENST00000478743 ZDHHC14Q8IZN3 488 aa14.39□□□□□ -0.11
HDAC8-217ENST00000478743 C12orf76Q8N812 135 aaPredicted RBP14.39□□□□□ -0.11
HDAC8-217ENST00000478743 LMBR1Q8WVP7 490 aa14.39□□□□□ -0.11
HDAC8-217ENST00000478743 TUT1Q9H6E5 874 aaKnown RBP14.39□□□□□ -0.11
HDAC8-217ENST00000478743 C2orf16Q68DN1 1984 aa14.39□□□□□ -0.11
HDAC8-217ENST00000478743 ANKRD11Q6UB99 2663 aaPredicted RBP14.39□□□□□ -0.11
HDAC8-217ENST00000478743 SETXQ7Z333 2677 aaKnown RBP14.39□□□□□ -0.11
HDAC8-217ENST00000478743 WDR19Q8NEZ3 1342 aa14.39□□□□□ -0.11
HDAC8-217ENST00000478743 PPFIA4O75335 1185 aa14.38□□□□□ -0.11
HDAC8-217ENST00000478743 RLBP1P12271 317 aa14.38□□□□□ -0.11
HDAC8-217ENST00000478743 ATP5JP18859 108 aa14.38□□□□□ -0.11
HDAC8-217ENST00000478743 CD52P31358 61 aa14.38□□□□□ -0.11
HDAC8-217ENST00000478743 NOVP48745 357 aa14.38□□□□□ -0.11
HDAC8-217ENST00000478743 FBXO47Q5MNV8 452 aa14.38□□□□□ -0.11
HDAC8-217ENST00000478743 NPAS4Q8IUM7 802 aa14.38□□□□□ -0.11
HDAC8-217ENST00000478743 IFNL3Q8IZI9 196 aa14.38□□□□□ -0.11
HDAC8-217ENST00000478743 IL31RAQ8NI17 732 aa14.38□□□□□ -0.11
HDAC8-217ENST00000478743 ZBTB10Q96DT7 871 aa14.38□□□□□ -0.11
HDAC8-217ENST00000478743 RMDN3Q96TC7 470 aa14.38□□□□□ -0.11
HDAC8-217ENST00000478743 SH2B1Q9NRF2 756 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms