RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 A0A087X0T9 212 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 TLDC2A0PJX2 215 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 CEP104O60308 925 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 SMIM24O75264 130 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 PDHA1P08559 390 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 FAM228BP0C875 321 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 NEFHP12036 1026 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 XBP1P17861 261 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 ALX1Q15699 326 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 TOM1L2Q6ZVM7 507 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 DRAXINQ8NBI3 349 aaPredicted RBP10.76□□□□□ -0.69
COL13A1-207ENST00000478219 FAM89AQ96GI7 184 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 EPAS1Q99814 870 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 TRIM51Q9BSJ1 452 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 CNNM2Q9H8M5 875 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 KBTBD4Q9NVX7 518 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 G3BP2Q9UN86 482 aaKnown RBP10.76□□□□□ -0.69
COL13A1-207ENST00000478219 IQSEC3Q9UPP2 1182 aaPredicted RBP10.76□□□□□ -0.69
COL13A1-207ENST00000478219 NR2E1Q9Y466 385 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 SLIT3O75094 1523 aa10.76□□□□□ -0.69
COL13A1-207ENST00000478219 LIN7AO14910 233 aaPredicted RBP10.75□□□□□ -0.69
COL13A1-207ENST00000478219 PRPF3O43395 683 aaKnown RBP10.75□□□□□ -0.69
COL13A1-207ENST00000478219 ATP2A2P16615 1042 aaKnown RBP10.75□□□□□ -0.69
COL13A1-207ENST00000478219 KCNMA1Q12791 1236 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 USP4Q13107 963 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 KIAA0753Q2KHM9 967 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 GALNTL6Q49A17 601 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 TTC5Q8N0Z6 440 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 ENAHQ8N8S7 591 aaPredicted RBP10.75□□□□□ -0.69
COL13A1-207ENST00000478219 PHC3Q8NDX5 983 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 UHMK1Q8TAS1 419 aaKnown RBP10.75□□□□□ -0.69
COL13A1-207ENST00000478219 TBC1D5Q92609 795 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 CENPTQ96BT3 561 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 KLHL29Q96CT2 875 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 KANSL2Q9H9L4 492 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 RBAK-RBAKDNI3L0D1 243 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 ZBTB48P10074 688 aaPredicted RBP10.75□□□□□ -0.69
COL13A1-207ENST00000478219 MSH2P43246 934 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 MMP13P45452 471 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 LAMB3Q13751 1172 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 PLS1Q14651 629 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 SLMAPQ14BN4 828 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 METTL24Q5JXM2 366 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 CNBD1Q8NA66 436 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 MIGA1Q8NAN2 632 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 NUCKS1Q9H1E3 243 aaKnown RBP10.75□□□□□ -0.69
COL13A1-207ENST00000478219 LMCD1Q9NZU5 365 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 ABCC12Q96J65 1359 aa10.75□□□□□ -0.69
COL13A1-207ENST00000478219 A0A0G2JS52 829 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 SNX3O60493 162 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 COPB2P35606 906 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 LONP1P36776 959 aaKnown RBP10.74□□□□□ -0.69
COL13A1-207ENST00000478219 ADAM9Q13443 819 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 LRRC14Q15048 493 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 SRBD1Q8N5C6 995 aaKnown RBP10.74□□□□□ -0.69
COL13A1-207ENST00000478219 TTLL11Q8NHH1 800 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 ANKS1AQ92625 1134 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 EZH1Q92800 747 aaPredicted RBP10.74□□□□□ -0.69
COL13A1-207ENST00000478219 UTP4Q969X6 686 aaKnown RBP10.74□□□□□ -0.69
COL13A1-207ENST00000478219 AZI2Q9H6S1 392 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 CNOT10Q9H9A5 744 aaKnown RBP10.74□□□□□ -0.69
COL13A1-207ENST00000478219 SAMD15Q9P1V8 674 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 ADAMTS1Q9UHI8 967 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 NOC2LQ9Y3T9 749 aaKnown RBP10.74□□□□□ -0.69
COL13A1-207ENST00000478219 C2CD2Q9Y426 696 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 STXBP3O00186 592 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 NOL4O94818 638 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 GCP02774 474 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 PHKG2P15735 406 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 FERP16591 822 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 NLRP5P59047 1200 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 BNIP1Q12981 228 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 CCDC38Q502W7 563 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 RNF220Q5VTB9 566 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 CACNA2D4Q7Z3S7 1137 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 MFN1Q8IWA4 741 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 FITM2Q8N6M3 262 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 METTL13Q8N6R0 699 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 ANKLE1Q8NAG6 615 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 GLIS3Q8NEA6 775 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 ATP8B4Q8TF62 1192 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 TEKT4Q8WW24 435 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 RNF25Q96BH1 459 aaPredicted RBP10.74□□□□□ -0.69
COL13A1-207ENST00000478219 PBKQ96KB5 322 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.74□□□□□ -0.69
COL13A1-207ENST00000478219 TXLNGYQ9BZA5 131 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 TRIM9Q9C026 710 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 ARHGEF3Q9NR81 526 aa10.74□□□□□ -0.69
COL13A1-207ENST00000478219 CYP2D7A0A087X1C5 515 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 FAM170AA1A519 330 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 MINDY4BA8MYZ0 360 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 FOXO6A8MYZ6 492 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 RNF8O76064 485 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 OAS1P00973 400 aaKnown RBP10.73□□□□□ -0.69
COL13A1-207ENST00000478219 PLCG1P19174 1290 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 SLCO1A2P46721 670 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 CCNG1P51959 295 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 COPS2P61201 443 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 ROR2Q01974 943 aaKnown RBP10.73□□□□□ -0.69
COL13A1-207ENST00000478219 EVX2Q03828 476 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms